; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005905 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005905
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionORM1-like protein 3
Genome locationscaffold254:2346537..2351850
RNA-Seq ExpressionMS005905
SyntenyMS005905
Gene Ontology termsGO:0090156 - cellular sphingolipid homeostasis (biological process)
GO:1900060 - negative regulation of ceramide biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0035339 - SPOTS complex (cellular component)
InterPro domainsIPR007203 - ORMDL family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650225.1 hypothetical protein Csa_011543 [Cucumis sativus]4.0e-8696.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPP DLNRNTEWF+YPGVWTTYILILFFAW+LVLSVFGCSPGMAWT+VNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

XP_004133804.1 ORM1-like protein 3 [Cucumis sativus]4.0e-8696.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPP DLNRNTEWF+YPGVWTTYILILFFAW+LVLSVFGCSPGMAWT+VNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

XP_008437865.1 PREDICTED: ORM1-like protein 3 [Cucumis melo]1.4e-8697.45Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFFAW+LVLSVFGCSPGMAWT+VNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

XP_022147418.1 ORM1-like protein 3 [Momordica charantia]1.2e-87100Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

XP_022924714.1 ORM1-like protein 3 [Cucurbita moschata]1.5e-8596.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MA+LYVKAVPPADLNRNTEWFLYPGVWTTYILILFF W+LVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQG+YNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

TrEMBL top hitse value%identityAlignment
A0A0A0L3T2 Uncharacterized protein1.9e-8696.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPP DLNRNTEWF+YPGVWTTYILILFFAW+LVLSVFGCSPGMAWT+VNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

A0A1S3AVL5 ORM1-like protein 36.6e-8797.45Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPPADLNRNTEWF+YPGVWTTYILILFFAW+LVLSVFGCSPGMAWT+VNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

A0A6J1D195 ORM1-like protein 35.9e-88100Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

A0A6J1E9Z8 ORM1-like protein 37.3e-8696.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MA+LYVKAVPPADLNRNTEWFLYPGVWTTYILILFF W+LVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQG+YNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

A0A6J1ISE5 ORM1-like protein 37.3e-8696.82Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MA+LYVKAVPPADLNRNTEWFLYPGVWTTYILILFF W+LVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQG+YNRLTWWEQIDNGKQLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLTVVPVVLYLIASHTTDYQHPMLFLN+LAVIVLVIAKFPHMHKVRIFGINADK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

SwissProt top hitse value%identityAlignment
D2I2F3 ORM1-like protein 34.0e-2542.36Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV
        +++N NT      G+W +Y+L +    V++LS+   S  + WT+ NL H    Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV

Query:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN
        VLY + S  T Y      LN+++++ ++I K P +H VRIFGIN
Subjt:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN

O42901 Uncharacterized protein C119.09c1.6e-2639.57Show/hide
Query:  NRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYL
        N N+ W  Y G W  +I+++    ++  ++   S  +AWT+ NL++ A ++  FHW  GTPF  + G Y+RLT WEQ+D G Q T  RK+L V+P++L+L
Subjt:  NRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPVVLYL

Query:  IASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGI
        +++H T Y   M  +N  A+ +++I K P +H+ RIFGI
Subjt:  IASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGI

Q6QI25 ORM1-like protein 33.1e-2542.36Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV
        +++N NT      G+W +Y+L +    V++LS+   S  + WT+ NL H    Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV

Query:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN
        VLY + S  T Y      LN+++++ ++I K P +H VRIFGIN
Subjt:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN

Q921I0 ORM1-like protein 11.8e-2542.18Show/hide
Query:  VPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTV
        V  +++N NT      G+W TY L +    +++LS+  CS  +AWT+ N+ H    Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKF T+
Subjt:  VPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTV

Query:  VPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN
         P++LY +AS  T Y      LN+ +++ ++I K P +H VRIFGIN
Subjt:  VPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN

Q9CPZ6 ORM1-like protein 31.8e-2542.36Show/hide
Query:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV
        +++N NT      G+W +Y+L +    V++LS+   S  + WT+ NL H    Y F H  KGTPF   DQG    LT WEQ+D G Q T +RKFLT+ P+
Subjt:  ADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPF-AEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV

Query:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN
        VLY + S  T Y      LN+++++ ++I K P +H VRIFGIN
Subjt:  VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGIN

Arabidopsis top hitse value%identityAlignment
AT1G01230.1 ORMDL family protein4.5e-8084.08Show/hide
Query:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR
        MANLYVKAVPP D+NRNTEWF+YPGVWTTY+LILFF W++VLSV GCSPGMAWT+VNL+HF VTYH FHW KGTPFA+DQGIYN LTWWEQ+DNG+QLTR
Subjt:  MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTR

Query:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        NRKFLT+VPVVLYLIASHTTDY+HP LFLN+LAV+VLV+AKFP+MHKVRIFGIN DK
Subjt:  NRKFLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

AT5G42000.1 ORMDL family protein3.8e-7984.42Show/hide
Query:  LYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRK
        +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+W+LVLSVF CSPG+AWTIV+L+HF VTYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRK
Subjt:  LYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRK

Query:  FLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK
        FLTVVPVVLYLIASHTTDYQHPMLFLN+LAV V+V+AKFPHMHKVRIFGIN D+
Subjt:  FLTVVPVVLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK

AT5G42000.2 ORMDL family protein1.9e-5483.49Show/hide
Query:  LYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRK
        +YV+A+P  D+NRNTEWF YPGVWTTYILILFF+W+LVLSVF CSPG+AWTIV+L+HF VTYH FHWKKGTPF +DQG+YNRLTWWEQIDNGKQLTRNRK
Subjt:  LYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRK

Query:  FLTVVPVVL
        FLTVVPVVL
Subjt:  FLTVVPVVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAATCTCTATGTGAAGGCTGTGCCTCCGGCGGATCTGAATAGGAACACAGAATGGTTCCTGTATCCCGGTGTTTGGACCACCTATATTCTCATTCTGTTCTTCGC
CTGGGTTCTCGTCCTCTCCGTATTTGGCTGCTCTCCTGGCATGGCCTGGACCATCGTCAATCTCTCTCATTTCGCTGTCACTTACCACTTCTTCCATTGGAAGAAAGGGA
CACCATTTGCTGAAGACCAGGGGATCTACAATAGATTGACGTGGTGGGAGCAGATAGATAATGGAAAGCAGCTTACCCGCAACAGGAAATTCTTGACTGTTGTTCCCGTG
GTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACATCCAATGTTATTTCTCAACAGTCTTGCAGTAATTGTTCTAGTTATTGCAAAGTTTCCCCATATGCACAA
GGTACGTATCTTTGGAATCAATGCCGACAAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAATCTCTATGTGAAGGCTGTGCCTCCGGCGGATCTGAATAGGAACACAGAATGGTTCCTGTATCCCGGTGTTTGGACCACCTATATTCTCATTCTGTTCTTCGC
CTGGGTTCTCGTCCTCTCCGTATTTGGCTGCTCTCCTGGCATGGCCTGGACCATCGTCAATCTCTCTCATTTCGCTGTCACTTACCACTTCTTCCATTGGAAGAAAGGGA
CACCATTTGCTGAAGACCAGGGGATCTACAATAGATTGACGTGGTGGGAGCAGATAGATAATGGAAAGCAGCTTACCCGCAACAGGAAATTCTTGACTGTTGTTCCCGTG
GTGCTGTACTTGATAGCCTCACACACAACTGACTATCAACATCCAATGTTATTTCTCAACAGTCTTGCAGTAATTGTTCTAGTTATTGCAAAGTTTCCCCATATGCACAA
GGTACGTATCTTTGGAATCAATGCCGACAAG
Protein sequenceShow/hide protein sequence
MANLYVKAVPPADLNRNTEWFLYPGVWTTYILILFFAWVLVLSVFGCSPGMAWTIVNLSHFAVTYHFFHWKKGTPFAEDQGIYNRLTWWEQIDNGKQLTRNRKFLTVVPV
VLYLIASHTTDYQHPMLFLNSLAVIVLVIAKFPHMHKVRIFGINADK