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MS005910 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005910
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein yippee-like
Genome locationscaffold254:2381419..2381837
RNA-Seq ExpressionMS005910
SyntenyMS005910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147496.1 protein yippee-like At4g27745 [Momordica charantia]3.3e-5298.11Show/hide
Query:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK
        MADSIGERSYSCQKCGNRVSR+DDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGE LGWKYIKAYDQSQKYKEGKVVLEKFK
Subjt:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK

Query:  ITDEDS
        ITDEDS
Subjt:  ITDEDS

XP_022924571.1 protein yippee-like At4g27745 isoform X1 [Cucurbita moschata]4.6e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

XP_022924572.1 protein yippee-like At4g27745 isoform X2 [Cucurbita moschata]4.6e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

XP_022979315.1 protein yippee-like At4g27745 [Cucurbita maxima]4.6e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

XP_023527393.1 protein yippee-like At4g27745 [Cucurbita pepo subsp. pepo]4.6e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

TrEMBL top hitse value%identityAlignment
A0A5A7U5X0 Protein yippee-like2.1e-3670.75Show/hide
Query:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK
        +AD + ER YSCQ C N++SRHDDIISK FQS KGRAFLFYEA+NV  G ++ KMFI+G Y V D++C++CG+ LGWKYIKAYD SQKYKEGKVVLEKFK
Subjt:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK

Query:  ITDEDS
        ITD  S
Subjt:  ITDEDS

A0A6J1D2J5 Protein yippee-like1.6e-5298.11Show/hide
Query:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK
        MADSIGERSYSCQKCGNRVSR+DDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGE LGWKYIKAYDQSQKYKEGKVVLEKFK
Subjt:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK

Query:  ITDEDS
        ITDEDS
Subjt:  ITDEDS

A0A6J1E9D7 Protein yippee-like2.2e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

A0A6J1E9T8 Protein yippee-like2.2e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

A0A6J1ISW6 Protein yippee-like2.2e-3875.24Show/hide
Query:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF
        MAD  IG R YSCQ C N VSRHDDIISK FQS +GRAFLFYEA+NV  GPQQEKM ++G Y+VSD+FCS+CG+ LGWKYIKAYD++Q+YKEGKVVLEKF
Subjt:  MAD-SIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKF

Query:  KITDE
        KIT+E
Subjt:  KITDE

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like7.4e-2350Show/hide
Query:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDED
        YSC+ CG  ++  ++I+SKSF  K G+A+LF +  NV  G  + +M +TG + V+D+FC  CG  +GWKY  A+++SQKYKEGK VLE+FKIT  D
Subjt:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDED

Q65Z54 Protein yippee-like 37.4e-2350Show/hide
Query:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLE
        R YSC  C   ++ HDD+ISKSFQ  +GRA+LF    NV  GP +E++ +TG + V+D++C +C   LGWKY +A++ SQKYKEGK ++E
Subjt:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLE

Q6NWI4 Protein yippee-like 37.4e-2350Show/hide
Query:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLE
        R YSC  C   ++ HDD+ISKSFQ  +GRA+LF    NV  GP +E++ +TG + V+D++C +C   LGWKY +A++ SQKYKEGK ++E
Subjt:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLE

Q9FN32 Protein yippee-like At5g539403.0e-2446.39Show/hide
Query:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDE
        RSY C+ C   ++  DD++S+SF  ++G+A+LF  + N++MGP +E++ ++G + V+D+FC  CG+N+GWKY  A++++QKYKEGK VLE+ +I DE
Subjt:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDE

Q9T096 Protein yippee-like At4g277451.4e-2956.19Show/hide
Query:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK
        MA +IG R YSC  C N V  HDDIISK+FQ + GRAFLF  A N+ +GP++++  +TG + V+D+ C DC E LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK

Query:  ITDED
        I  ED
Subjt:  ITDED

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein8.1e-2548.96Show/hide
Query:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDED
        YSC+ C   ++ ++DIISKSF  K G+A+LF +  NV++G  +E++ +TG++ V+D+FC  CG  +GWKY  A++++QKYKEGK VLE+FKI+  D
Subjt:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDED

AT3G08990.1 Yippee family putative zinc-binding protein9.0e-2452.17Show/hide
Query:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKI
        YSC+ C    +  +DIISKSF  K GRA+LF    NV +G ++ ++ ITG + V+D+FC  CG  +GWKY  AYD+SQKYKEGK +LE+FK+
Subjt:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKI

AT3G55890.1 Yippee family putative zinc-binding protein9.0e-2452.69Show/hide
Query:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKIT
        Y C+ C   +S   DI+SKSFQ K GRA+LF    NV++G ++++M ITG + V D+FC  CG N+GWKY  A+++SQKYKEGK VLE +KI+
Subjt:  YSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKIT

AT4G27745.1 Yippee family putative zinc-binding protein9.9e-3156.19Show/hide
Query:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK
        MA +IG R YSC  C N V  HDDIISK+FQ + GRAFLF  A N+ +GP++++  +TG + V+D+ C DC E LGWKY +AY+ SQKYKEGK + EK K
Subjt:  MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFK

Query:  ITDED
        I  ED
Subjt:  ITDED

AT5G53940.1 Yippee family putative zinc-binding protein2.1e-2546.39Show/hide
Query:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDE
        RSY C+ C   ++  DD++S+SF  ++G+A+LF  + N++MGP +E++ ++G + V+D+FC  CG+N+GWKY  A++++QKYKEGK VLE+ +I DE
Subjt:  RSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATTCGATCGGTGAACGCTCCTACAGTTGCCAAAAGTGCGGGAACCGCGTATCAAGACATGACGACATTATTTCCAAAAGCTTTCAGTCGAAGAAAGGAAGAGC
CTTCTTGTTCTACGAAGCAAAGAATGTGGCAATGGGGCCTCAGCAGGAGAAGATGTTCATAACAGGCCAATACGTTGTTTCTGATGTATTTTGCAGCGACTGTGGGGAGA
ATTTGGGTTGGAAATACATCAAGGCTTATGACCAATCGCAGAAGTATAAAGAAGGCAAAGTGGTATTGGAGAAGTTCAAGATTACAGATGAAGATTCC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATTCGATCGGTGAACGCTCCTACAGTTGCCAAAAGTGCGGGAACCGCGTATCAAGACATGACGACATTATTTCCAAAAGCTTTCAGTCGAAGAAAGGAAGAGC
CTTCTTGTTCTACGAAGCAAAGAATGTGGCAATGGGGCCTCAGCAGGAGAAGATGTTCATAACAGGCCAATACGTTGTTTCTGATGTATTTTGCAGCGACTGTGGGGAGA
ATTTGGGTTGGAAATACATCAAGGCTTATGACCAATCGCAGAAGTATAAAGAAGGCAAAGTGGTATTGGAGAAGTTCAAGATTACAGATGAAGATTCC
Protein sequenceShow/hide protein sequence
MADSIGERSYSCQKCGNRVSRHDDIISKSFQSKKGRAFLFYEAKNVAMGPQQEKMFITGQYVVSDVFCSDCGENLGWKYIKAYDQSQKYKEGKVVLEKFKITDEDS