; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005911 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005911
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionserine/arginine-rich splicing factor RS31-like
Genome locationscaffold254:2382807..2385280
RNA-Seq ExpressionMS005911
SyntenyMS005911
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR029537 - Arginine/serine-rich-splicing factor RSP31/31A
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650222.1 hypothetical protein Csa_011015 [Cucumis sativus]7.1e-12795.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR

KAG7019084.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.7e-12392.98Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFE+ERDAED+IR LDNM FGYDRRRLSVEWARGERGR RDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRAAYGR GD SPYRRSPSP + 
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP+YGR R
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR

XP_004133800.1 serine/arginine-rich splicing factor RS31 isoform X1 [Cucumis sativus]7.1e-12795.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR

XP_022147391.1 serine/arginine-rich splicing factor RS31-like isoform X1 [Momordica charantia]1.2e-134100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR

XP_038893478.1 serine/arginine-rich splicing factor RS31 isoform X1 [Benincasa hispida]4.5e-12996.72Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA YGRPGD SPYRRSPSP FR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY--GRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY  GRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY--GRFR

TrEMBL top hitse value%identityAlignment
A0A0A0L8H4 Uncharacterized protein3.5e-12795.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR

A0A1S3AUZ7 serine/arginine-rich splicing factor RS31-like isoform X13.5e-12795.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR

A0A5D3DBI0 Serine/arginine-rich splicing factor RS31 isoform X23.5e-12795.9Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLF+KYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDN+ FGYDRRRLSVEWARGERGRHRDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA  YGRPGD SPYRRSPSP F
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRA-AYGRPGDSSPYRRSPSPAF

Query:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR
        RRRPSPDYGRA SPAYDRYNGPYERRRSPDYGRNRSPEY GRFR
Subjt:  RRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEY-GRFR

A0A6J1D279 serine/arginine-rich splicing factor RS31-like isoform X15.9e-135100Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR

A0A6J1ECU9 serine/arginine-rich splicing factor RS31-like isoform X11.8e-12392.98Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFE+ERDAED+IR LDNM FGYDRRRLSVEWARGERGR RDGSKS+ANQRPTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR
        DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQE+ATKALECTHMSKILDRVVSVEYALRDDGERGD +D+SPRRAAYGR GD SPYRRSPSP + 
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFR

Query:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR
        RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP+YGR R
Subjt:  RRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSPEYGRFR

SwissProt top hitse value%identityAlignment
P92964 Serine/arginine-rich splicing factor RS314.1e-9374.09Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  FGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR  +   R   S  Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYGRFR
           RRPSPDYGRARSP YDRY GP  YERRRSPDYGR RS +YGR R
Subjt:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYGRFR

P92965 Serine/arginine-rich splicing factor RS401.3e-7059.38Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR RR
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR

P92966 Serine/arginine-rich splicing factor RS416.4e-7056.25Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGER---GRHRDGSKSIANQRPTKTLFV
        M+P+F GNF YD R+S+LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   +G   RRL VEW + +R   GR     +S +  RP+KTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGER---GRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRSP
        INFD   TR RD+ERHFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ T+ SK++D+V+SVEYA++DD  RG+ +    RR       D SP   RRSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRSP

Query:  SPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR-----------SPEYGR
        SP  R R SPDYGR  SP   +       R SPDYGR R           SP+Y R
Subjt:  SPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNR-----------SPEYGR

Q9NEW6 Probable splicing factor, arginine/serine-rich 36.9e-1631.27Show/hide
Query:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARG------------ERGRH--------
        ++VGN   D R+ E+E +F KYGR++ +D+KSG    FAFV FED RDAEDA+R  D   + +D RR+ VE+ RG            + G H        
Subjt:  IFVGNFGYDTRQSELERLFAKYGRVERIDMKSG----FAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARG------------ERGRH--------

Query:  RDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP
        R G +    QR T    ++   P     +D++ H    G V    + R+    V+F   ED   A+     +K         Y  +R+D   G       
Subjt:  RDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRN-FAFVQFETQEDATKALECTHMSKILDRVVSVEY-ALRDDGERGDPFDESP

Query:  RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP
             G  G      RS SP   RR SP Y   RS +  R      R RS     +RSP
Subjt:  RRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNGPYERRRSPDYGRNRSP

Q9ZPX8 Serine/arginine-rich splicing factor RS31A1.1e-9071.66Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFR
         +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YGR R
Subjt:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFR

Arabidopsis top hitse value%identityAlignment
AT2G46610.1 RNA-binding (RRM/RBD/RNP motifs) family protein8.0e-9271.66Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV
        MR ++VGNF YDTR S+LERLF+K+GRV+R+DMKSG+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFV
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFV

Query:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP
        INFDPIRTR RD+ERHFEPYGKVLNVR+RRNFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP
Subjt:  INFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFR
         +RRRPSPDY R RSP YDRY G  PYERR+SPDYGR RS +YGR R
Subjt:  AFRRRPSPDYGRARSPAYDRYNG--PYERRRSPDYGRNRSPEYGRFR

AT2G46610.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.8e-7570.05Show/hide
Query:  IDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR
        + + +G+AFVYFEDERDAEDAIR  DN  FGY RR+LSVEWA+   GERG+ RDG K+++NQRPTKTLFVINFDPIRTR RD+ERHFEPYGKVLNVR+RR
Subjt:  IDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWAR---GERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRR

Query:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERR
        NFAFVQF TQEDATKAL+ TH SK+LD+VVSVEYALR+ GER D +  S R             RRSPSP +RRRPSPDY R RSP YDRY G  PYERR
Subjt:  NFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG--PYERR

Query:  RSPDYGRNRSPEYGRFR
        +SPDYGR RS +YGR R
Subjt:  RSPDYGRNRSPEYGRFR

AT3G61860.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-9474.09Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF
        MRP+FVGNF Y+TRQS+LERLF KYGRV+R+DMKSG+AFVYFEDERDAEDAIR LDN  FGY++RRLSVEWA+GERGR R  +K+ +N +PTKTLFVINF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINF

Query:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP
        DPIRT+  DIE+HFEPYGKV NVRIRRNF+FVQFETQEDATKALE T  SKILDRVVSVEYAL+DD ER D     SPRR  +   R   S  Y R PSP
Subjt:  DPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGD-PFDESPRR--AAYGRPGDSSPYRRSPSP

Query:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYGRFR
           RRPSPDYGRARSP YDRY GP  YERRRSPDYGR RS +YGR R
Subjt:  AFRRRPSPDYGRARSPAYDRYNGP--YERRRSPDYGRNRSPEYGRFR

AT4G25500.1 arginine/serine-rich splicing factor 359.1e-7259.38Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR RR
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR

AT4G25500.4 arginine/serine-rich splicing factor 359.1e-7259.38Show/hide
Query:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF
        M+P+F GNF YD R+ +LERLF KYG+VER+DMK+GFAFVY EDERDAEDAIR LD   FG   RRL VEW + ERG   R   GS +S ++ RP+KTLF
Subjt:  MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERG---RHRDGS-KSIANQRPTKTLF

Query:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS
        VINFD   TR RD+E+HFEPYGK++NVRIRRNFAF+Q+E QEDAT+AL+ ++ SK++D+V+SVEYA++DD  RG+      RR       D SP   RRS
Subjt:  VINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSP--YRRS

Query:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR
        PSP  R R SPDYGR  SP  AY  +R +  Y RRRSP  Y ++R  SPEYGR RR
Subjt:  PSPAFRRRPSPDYGRARSP--AY--DRYNGPYERRRSPD-YGRNR--SPEYGRFRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTT
TGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGG
GTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATT
GAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTCGAGTGTAC
CCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGAC
GACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGC
CCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGG
mRNA sequenceShow/hide mRNA sequence
ATGAGGCCGATATTTGTTGGGAACTTTGGGTATGACACCCGGCAATCGGAGCTGGAGCGGTTATTCGCAAAATATGGGAGAGTTGAAAGGATCGACATGAAATCTGGTTT
TGCTTTTGTTTACTTTGAAGATGAGAGGGATGCGGAAGATGCCATTCGTGGCCTTGATAATATGGCATTTGGTTATGATAGACGCAGATTGTCTGTGGAATGGGCTAGGG
GTGAACGAGGTCGTCATCGTGATGGATCCAAGTCAATTGCAAATCAGAGGCCAACCAAAACTCTGTTTGTGATCAACTTTGACCCAATTCGTACCAGAGTCCGTGATATT
GAAAGACACTTTGAACCTTATGGAAAGGTCCTCAATGTTCGCATAAGAAGGAACTTTGCATTTGTGCAATTTGAGACACAAGAGGATGCAACTAAAGCCCTCGAGTGTAC
CCACATGAGCAAAATATTAGACAGGGTTGTGTCTGTTGAGTATGCTTTGAGGGACGATGGTGAGAGGGGTGACCCGTTTGATGAGAGCCCTCGAAGAGCAGCTTATGGAC
GACCTGGGGACAGTAGTCCTTATCGGAGGTCACCTAGTCCTGCATTTCGACGTCGACCTAGTCCTGACTATGGCCGAGCTCGCAGCCCTGCGTATGATAGGTATAATGGC
CCTTACGAACGCCGCCGGAGTCCTGATTATGGTCGAAATCGAAGCCCTGAATATGGTAGATTTCGTAGG
Protein sequenceShow/hide protein sequence
MRPIFVGNFGYDTRQSELERLFAKYGRVERIDMKSGFAFVYFEDERDAEDAIRGLDNMAFGYDRRRLSVEWARGERGRHRDGSKSIANQRPTKTLFVINFDPIRTRVRDI
ERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKILDRVVSVEYALRDDGERGDPFDESPRRAAYGRPGDSSPYRRSPSPAFRRRPSPDYGRARSPAYDRYNG
PYERRRSPDYGRNRSPEYGRFRR