CuGenDBv2

Gene ID	MS005918
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DNA-directed RNA polymerase II subunit 1-like
Genome location	scaffold254:2413589..2415283
RNA-Seq Expression	MS005918
Synteny	MS005918
Gene Ontology terms	GO:0016310 - phosphorylation (biological process) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597058.1 hypothetical protein SDJN03_10238, partial [Cucurbita argyrosperma subsp. sororia]

3.2e-92

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRP TA + +     P PA  +  E+ P++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

XP_022147442.1 proline-rich receptor-like protein kinase PERK2 [Momordica charantia]

3.8e-157

97.4

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY
        MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSP TAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY

Query:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEYSSGK
        NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAAT    AAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEY+SGK
Subjt:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEYSSGK

Query:  PQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA
        PQ+KQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA
Subjt:  PQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA

Query:  QSVPGSTY
        QSV GSTY
Subjt:  QSVPGSTY

XP_022945677.1 DNA-directed RNA polymerase II subunit 1-like [Cucurbita moschata]

2.5e-92

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRP TA + +     P PA  +  E+ P++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

XP_022974814.1 DNA-directed RNA polymerase II subunit 1-like isoform X2 [Cucurbita maxima]

1.2e-91

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRPATA + +     P PA  +  E+  ++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

XP_023538835.1 proline-rich extensin-like protein EPR1 [Cucurbita pepo subsp. pepo]

5.5e-92

66.24

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRP TA + +   PA A  P    E+ P  P TA VLQTSPI+ERS R+PSP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERR+SA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5T3 Uncharacterized protein

9.6e-82

61.56

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY
        M+NLPRFGR W RFSSLPRP TA++PE      A  P    E+ P++  T    QTSPI++R+ RL SP KKF+SPPSSPKY  A   SP KPLSP P +
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY

Query:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHY--PKVEKPTKPDH--RPSEY
        NRY+GERR+SATTSPK  KP++ SPP SP+K ++ T  T   A APLSPL LPRS+ + EP  ++R RSPPE+EQK I Y     EKPTK DH  +  EY
Subjt:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHY--PKVEKPTKPDH--RPSEY

Query:  SSGKPQHKQQQQ--QSDVITIKGENVGAIMHITQSSDGTEMVKKKPST-ESGNDDEKGNKS-SSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSF-
         + KPQ KQQ Q  QSDVI IKGENVGA+MHITQSSDG+E++KKKP+  +S  ++EK NKS S+ P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F 
Subjt:  SSGKPQHKQQQQ--QSDVITIKGENVGAIMHITQSSDGTEMVKKKPST-ESGNDDEKGNKS-SSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSF-

Query:  SKKPAHG
        SKK  HG
Subjt:  SKKPAHG

A0A6J1D2D2 proline-rich receptor-like protein kinase PERK2

1.8e-157

97.4

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY
        MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSP TAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSY

Query:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEYSSGK
        NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAAT    AAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEY+SGK
Subjt:  NRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEYSSGK

Query:  PQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA
        PQ+KQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA
Subjt:  PQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHA

Query:  QSVPGSTY
        QSV GSTY
Subjt:  QSVPGSTY

A0A6J1G1L2 DNA-directed RNA polymerase II subunit 1-like

1.2e-92

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRP TA + +     P PA  +  E+ P++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

A0A6J1IEX0 DNA-directed RNA polymerase II subunit 1-like isoform X2

6.0e-92

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRPATA + +     P PA  +  E+  ++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

A0A6J1IHF4 DNA-directed RNA polymerase II subunit 1-like isoform X1

7.8e-92

65.92

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Query:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS
        MANLPRFGRTW RFSSLPRPATA + +     P PA  +  E+  ++P TA VLQTSPI+ERS R+ SP +K+ SPP+SPKYR AA + SP KPLSP P+
Subjt:  MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAA-AASPPKPLSPTPS

Query:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS
        YNRYDGERRSSA  SPK  K +YTSPP SPAKHKY T    +   APLSPL LP  E +HEP P +R RSPPEV+QKS+ Y K   EKP K DHR SEYS
Subjt:  YNRYDGERRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKV--EKPTKPDHRPSEYS

Query:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK
        SGKPQ KQ  QQQSDVI IKGENVGA+MHITQSSD TE  KKKP+    +++EK  NKSSS +P KSFMNSNFQGVNNS+LYNSS SHRDPGLHL+F+KK
Subjt:  SGKPQHKQ-QQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEK-GNKSSS-LPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKK

Query:  PAHGHAQSVPGSTY
        P   HA SV  S +
Subjt:  PAHGHAQSVPGSTY

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G63310.1 unknown protein

2.1e-04

30.53

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Query:  SGKPQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFS
        +G  Q+ +++    VIT+ G N+GA M            K +     G+ D+ G+        +++NSNFQ VNNS++  + +   DPG+HL  S
Subjt:  SGKPQHKQQQQQSDVITIKGENVGAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFS

AT2G46630.1 unknown protein

8.7e-11

27.48

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Query:  RTWQRFSSLPRPAT--ASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSYNRYDGE
        R   R S + RP     S P Q QP   P     R+  P SP   Q    +P R+++     P ++  SP  SP  R  +  +PPK  +P P   R    
Subjt:  RTWQRFSSLPRPAT--ASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSYNRYDGE

Query:  RRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAP--------------LSPLTLPRSEAKHEPGPT----IRSRSPPEVEQKSIHYPKVEKPTK
           S     +A+ P   + P SPA     T + +    +P              LSP +LP S    E   T    + +    +  + + H         
Subjt:  RRSSATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAP--------------LSPLTLPRSEAKHEPGPT----IRSRSPPEVEQKSIHYPKVEKPTK

Query:  PDHRPSEYSS-----------GKPQHKQQQQQSD-------VITIKGENVGAIMHITQSSDGTEM------------------VKKKPSTESGNDDEKGN
         +H  ++  S            K  H+Q             VITI GEN GA+M I +S  G +                    + + S+ S +D+ +G 
Subjt:  PDHRPSEYSS-----------GKPQHKQQQQQSD-------VITIKGENVGAIMHITQSSDGTEM------------------VKKKPSTESGNDDEKGN

Query:  K----------SSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKP
        K          +S+LP K+FMNSN Q +NNS++YNS+ SH DPG+HL  S+KP
Subjt:  K----------SSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCAAATCTTCCTCGGTTTGGCCGCACATGGCAACGTTTCTCTTCCCTCCCCCGCCCTGCCACTGCCTCACAACCGGAACAACTTCAGCCGGCACCGGCGCCGGCGCC
GATGAATGGGCGCGAAATTTCACCCAACTCTCCGGCCACCGCCCAAGTTCTCCAAACTTCTCCAATTAGAGAAAGATCTTCTCGACTTCCATCTCCCACGAAGAAATTTG
CCTCGCCGCCTTCTTCTCCAAAATATAGACCCGCAGCCGCCGCTTCACCTCCCAAGCCACTGTCTCCAACTCCGTCGTACAACCGTTACGACGGCGAACGACGGTCTAGT
GCCACCACATCTCCCAAAGCCATTAAACCCTCCTATACCTCTCCGCCGCTGTCGCCTGCCAAGCACAAATACCCCACCGCCGCTACCGCCGCTGCTGCCGCCGCACCGCT
CTCTCCTCTAACTCTGCCTCGGTCGGAGGCGAAACATGAACCTGGGCCCACGATTCGATCCAGAAGCCCACCGGAGGTCGAGCAGAAATCGATACATTATCCGAAGGTCG
AGAAGCCGACGAAACCCGATCACCGGCCGTCAGAGTACAGCTCCGGCAAGCCCCAGCACAAGCAGCAGCAGCAACAGAGCGACGTGATAACCATCAAAGGCGAGAACGTA
GGCGCCATCATGCACATAACTCAATCATCTGACGGCACAGAAATGGTGAAGAAAAAGCCAAGCACAGAGAGTGGAAACGATGATGAGAAAGGCAACAAATCAAGTTCTTT
GCCGGCGAAATCATTCATGAACAGCAATTTTCAAGGGGTCAATAATTCCGTTCTGTACAACTCCTCCTTCAGCCACCGTGATCCAGGCCTGCACCTCTCTTTCTCCAAGA
AGCCCGCCCATGGCCATGCCCAATCCGTTCCTGGTTCGACCTAC

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MANLPRFGRTWQRFSSLPRPATASQPEQLQPAPAPAPMNGREISPNSPATAQVLQTSPIRERSSRLPSPTKKFASPPSSPKYRPAAAASPPKPLSPTPSYNRYDGERRSS
ATTSPKAIKPSYTSPPLSPAKHKYPTAATAAAAAAPLSPLTLPRSEAKHEPGPTIRSRSPPEVEQKSIHYPKVEKPTKPDHRPSEYSSGKPQHKQQQQQSDVITIKGENV
GAIMHITQSSDGTEMVKKKPSTESGNDDEKGNKSSSLPAKSFMNSNFQGVNNSVLYNSSFSHRDPGLHLSFSKKPAHGHAQSVPGSTY

MS005918 (gene) of Bitter gourd (TR) v1 genome