; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005937 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005937
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationscaffold254:2550232..2550810
RNA-Seq ExpressionMS005937
SyntenyMS005937
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]5.0e-9186.53Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF EVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

KAG7018763.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-9286.53Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TF CRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

XP_022147266.1 DNA-directed RNA polymerase V subunit 7-like [Momordica charantia]1.3e-107100Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

XP_022924760.1 DNA-directed RNA polymerase V subunit 7-like [Cucurbita moschata]2.0e-9287.05Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

XP_022980115.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Cucurbita maxima]1.2e-8984.97Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVEL R+VEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGK EVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPIS S+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

TrEMBL top hitse value%identityAlignment
A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like2.1e-8783.94Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF EVEL RDVE+  E EKRD  +NF RYIITCLLENLLKEKA++DHGYFL+VT+LKSIGKG VKNE  SQC+SFP+TF CRTFLPFEGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        +RGLLL+CGPIKY FLSARKMPTY+YVGG+NP+FSS E ATI NDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS S+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like2.1e-8783.94Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF EVEL RDVE+  E EKRD  +NF RYIITCLLENLLKEKA++DHGYFL+VT+LKSIGKG VKNE  SQC+SFP+TF CRTFLPFEGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        +RGLLL+CGPIKY FLSARKMPTY+YVGG+NP+FSS E ATI NDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS S+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

A0A6J1D1U6 DNA-directed RNA polymerase V subunit 7-like6.4e-108100Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like9.9e-9387.05Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVEL RDVEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGKGEVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPISSS+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X16.0e-9084.97Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MFCEVEL R+VEV  E EKRDG  N  RYIITCLLENLLKEKAS+DHGYFLAVT+LKSIGK EVKNES+SQC+SFP+TFSCRTFLP EGEILHGVVRHIF
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL
        RRGLLL+CGPIKYVFLSARKMPTY YVGG+NP+FSS + ATI NDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPIS S+SDEFDL
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 76.3e-3641.85Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF +V+L  +V + AEN    G     R I+  LLE    +KA+++ GY++AVT L  IG+G+++  +    + FPV FS  TF  F+GEI+HGVV  + 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + G+ +RCGPI+ V+LS  KMP Y+Y+ G+NP+F +++ + I+ +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P46279 DNA-directed RNA polymerase II subunit RPB79.7e-1332.35Show/hide
Query:  FHRYIITCLLENLLKE---KASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIFRRGLLLRCGPIKYVFLSARKMP
        F R +   L+  L+K+     S  HG+ +AVT +++IGKG +++   +  ++FPV + C  F PF+GEIL  VV  + + G     GP++ +F+S   +P
Subjt:  FHRYIITCLLENLLKE---KASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIFRRGLLLRCGPIKYVFLSARKMP

Query:  -TYRYVGGKNPLF-SSDECATIENDVVVRFSVLGVR
            +  G  P + +SD    I+ D  VR  ++G R
Subjt:  -TYRYVGGKNPLF-SSDECATIENDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein2.1e-3943.5Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV
        MF EVE+ARDV + A   K     + H+ I+  LL++L+ EKA R+HG++L +T LKSIG       + +N  Q++ ++FPV+F+CRTFLP  G+IL G 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV

Query:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE
        V+ +   G  +R GP++Y +LS  KMP Y YV       + P F  D+ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE

Q8LE42 DNA-directed RNA polymerase IV subunit 71.1e-2940.11Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF +V+L  DV + AE+   D      R I+  LLE   KEKA++D GY +  T L++IG+G++K ++    I FPV F+   F  F+GEI+HGVV  + 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + G+ L+ GP + ++LS  KMP Y ++ G+NP F +   + I+    VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain8.1e-3140.11Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF +V+L  DV + AE+   D      R I+  LLE   KEKA++D GY +  T L++IG+G++K ++    I FPV F+   F  F+GEI+HGVV  + 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + G+ L+ GP + ++LS  KMP Y ++ G+NP F +   + I+    VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related1.5e-4043.5Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV
        MF EVE+ARDV + A   K     + H+ I+  LL++L+ EKA R+HG++L +T LKSIG       + +N  Q++ ++FPV+F+CRTFLP  G+IL G 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV

Query:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE
        V+ +   G  +R GP++Y +LS  KMP Y YV       + P F  D+ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE

AT4G14520.2 DNA-directed RNA polymerase II-related1.5e-4043.5Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV
        MF EVE+ARDV + A   K     + H+ I+  LL++L+ EKA R+HG++L +T LKSIG       + +N  Q++ ++FPV+F+CRTFLP  G+IL G 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV

Query:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE
        V+ +   G  +R GP++Y +LS  KMP Y YV       + P F  D+ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE

AT4G14520.3 DNA-directed RNA polymerase II-related1.5e-4043.5Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV
        MF EVE+ARDV + A   K     + H+ I+  LL++L+ EKA R+HG++L +T LKSIG       + +N  Q++ ++FPV+F+CRTFLP  G+IL G 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKG-----EVKNESQSQCISFPVTFSCRTFLPFEGEILHGV

Query:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE
        V+ +   G  +R GP++Y +LS  KMP Y YV       + P F  D+ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPIS + SDE
Subjt:  VRHIFRRGLLLRCGPIKYVFLSARKMPTYRYVGG-----KNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain4.4e-3741.85Show/hide
Query:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF
        MF +V+L  +V + AEN    G     R I+  LLE    +KA+++ GY++AVT L  IG+G+++  +    + FPV FS  TF  F+GEI+HGVV  + 
Subjt:  MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + G+ +RCGPI+ V+LS  KMP Y+Y+ G+NP+F +++ + I+ +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  RRGLLLRCGPIKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTTGTGAAGTGGAACTAGCAAGAGATGTGGAAGTCATGGCTGAAAATGAAAAGAGAGATGGTTTCAACAACTTTCACAGGTACATTATAACATGTCTATTAGAAAA
CCTATTGAAGGAGAAGGCCAGCAGAGATCATGGCTATTTTCTTGCTGTTACTAACTTGAAAAGCATAGGCAAGGGAGAGGTTAAGAATGAGTCTCAATCTCAATGCATTT
CATTCCCGGTGACGTTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCACGGAGTTGTTCGTCACATATTTAGGCGTGGATTACTCTTAAGATGTGGACCT
ATCAAGTATGTGTTTCTCTCAGCTCGTAAAATGCCAACCTACCGTTACGTCGGTGGCAAAAATCCACTTTTCTCGAGTGACGAATGTGCGACAATAGAAAACGACGTGGT
TGTACGTTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAGAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTCGGTCCGATTT
CGTCGTCCGAATCGGATGAGTTTGACTTG
mRNA sequenceShow/hide mRNA sequence
ATGTTTTGTGAAGTGGAACTAGCAAGAGATGTGGAAGTCATGGCTGAAAATGAAAAGAGAGATGGTTTCAACAACTTTCACAGGTACATTATAACATGTCTATTAGAAAA
CCTATTGAAGGAGAAGGCCAGCAGAGATCATGGCTATTTTCTTGCTGTTACTAACTTGAAAAGCATAGGCAAGGGAGAGGTTAAGAATGAGTCTCAATCTCAATGCATTT
CATTCCCGGTGACGTTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCACGGAGTTGTTCGTCACATATTTAGGCGTGGATTACTCTTAAGATGTGGACCT
ATCAAGTATGTGTTTCTCTCAGCTCGTAAAATGCCAACCTACCGTTACGTCGGTGGCAAAAATCCACTTTTCTCGAGTGACGAATGTGCGACAATAGAAAACGACGTGGT
TGTACGTTTCAGTGTGCTTGGTGTGAGATGGATAGAGAAGAGAGGATGCATCAAAAAGGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTCGGTCCGATTT
CGTCGTCCGAATCGGATGAGTTTGACTTG
Protein sequenceShow/hide protein sequence
MFCEVELARDVEVMAENEKRDGFNNFHRYIITCLLENLLKEKASRDHGYFLAVTNLKSIGKGEVKNESQSQCISFPVTFSCRTFLPFEGEILHGVVRHIFRRGLLLRCGP
IKYVFLSARKMPTYRYVGGKNPLFSSDECATIENDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISSSESDEFDL