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MS005938 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005938
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold254:2551731..2551859
RNA-Seq ExpressionMS005938
SyntenyMS005938
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0005488 - binding (molecular function)
GO:0016853 - isomerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB23112.1 Electron transfer flavoprotein-ubiquinone oxidoreductase [Morus notabilis]1.2e-0561.9Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW
        IGN+R RNE  L KWLW F  E  ALW R+IV KYG  S DW
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW

KAA0032235.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]2.9e-0758.14Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RN   L KWLWCF  E  +LW RII+SK+GS  F+W+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

RVW65401.1 Isoamylase 3, chloroplastic [Vitis vinifera]1.6e-0556.1Show/hide
Query:  GNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW
        GN+ +RN  FL KWLW ++ E SALW ++I+S YGSHS  W
Subjt:  GNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW

TYK22164.1 peptidyl-prolyl cis-trans isomerase CYP23 isoform X1 [Cucumis melo var. makuwa]2.9e-0758.14Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RN   L KWLWCF  E  +LW RII+SK+GS  F+W+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

XP_022151711.1 uncharacterized protein LOC111019624 [Momordica charantia]1.8e-0967.44Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RNE FL KWLW F HE  ALWR+IIVSKY  H  DW+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

TrEMBL top hitse value%identityAlignment
A0A5A7SSQ8 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X11.4e-0758.14Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RN   L KWLWCF  E  +LW RII+SK+GS  F+W+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

A0A5D3DEZ6 Peptidyl-prolyl cis-trans isomerase CYP23 isoform X11.4e-0758.14Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RN   L KWLWCF  E  +LW RII+SK+GS  F+W+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

A0A6J1DFI2 uncharacterized protein LOC1110196248.8e-1067.44Show/hide
Query:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV
        +GNLR RNE FL KWLW F HE  ALWR+IIVSKY  H  DW+
Subjt:  IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV

A0A7C9A7F0 Uncharacterized protein (Fragment)3.5e-0664.1Show/hide
Query:  LRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW
        LR  NE  +TKWLW F +E  ALWR+IIVSKYG  SF W
Subjt:  LRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW

A0A7C9A9A0 Uncharacterized protein (Fragment)3.5e-0664.1Show/hide
Query:  LRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW
        LR  NE  +TKWLW F +E  ALWR+IIVSKYG  SF W
Subjt:  LRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTGGGAACTTGAGGTTTAGGAATGAGACTTTCTTAACTAAATGGTTGTGGTGTTTCATTCATGAATCTAGTGCCTTGTGGCGAAGGATTATCGTGAGCAAGTATGGGTC
GCATTCGTTTGATTGGGTT
mRNA sequenceShow/hide mRNA sequence
ATTGGGAACTTGAGGTTTAGGAATGAGACTTTCTTAACTAAATGGTTGTGGTGTTTCATTCATGAATCTAGTGCCTTGTGGCGAAGGATTATCGTGAGCAAGTATGGGTC
GCATTCGTTTGATTGGGTT
Protein sequenceShow/hide protein sequence
IGNLRFRNETFLTKWLWCFIHESSALWRRIIVSKYGSHSFDWV