; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005940 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005940
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionE3 ubiquitin protein ligase DRIP2-like
Genome locationscaffold254:2555525..2557003
RNA-Seq ExpressionMS005940
SyntenyMS005940
Gene Ontology termsGO:0009414 - response to water deprivation (biological process)
GO:0051865 - protein autoubiquitination (biological process)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0005515 - protein binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR044807 - E3 ubiquitin protein ligase DRIP1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582350.1 E3 ubiquitin protein ligase DRIP2, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL+I
Subjt:  AKRKERSFSSLEI

KAG7018762.1 E3 ubiquitin protein ligase DRIP2 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL+I
Subjt:  AKRKERSFSSLEI

XP_022147455.1 E3 ubiquitin protein ligase DRIP2-like [Momordica charantia]3.9e-62100Show/hide
Query:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
        MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
Subjt:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE

Query:  HPNSLPAKRKERSFSSLEI
        HPNSLPAKRKERSFSSLEI
Subjt:  HPNSLPAKRKERSFSSLEI

XP_022924759.1 E3 ubiquitin protein ligase DRIP2-like [Cucurbita moschata]3.0e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL+I
Subjt:  AKRKERSFSSLEI

XP_023528650.1 E3 ubiquitin protein ligase DRIP2-like [Cucurbita pepo subsp. pepo]3.0e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL+I
Subjt:  AKRKERSFSSLEI

TrEMBL top hitse value%identityAlignment
A0A0A0L4K2 RING-type domain-containing protein2.7e-4073.5Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPN---
        VK+ +EKL  CLTCPLC NLF NATT+SECLHTFCRDCIY+KI  +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF CK R EK PE  +  +   
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPN---

Query:  -SLPAKRKERSFSSLEI
         SLP KRKE   S LEI
Subjt:  -SLPAKRKERSFSSLEI

A0A5A7U6S5 E3 ubiquitin protein ligase DRIP2-like1.0e-3971.55Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPN---
        VK+ +EKL  CLTCPLC NLF NATT+SECLHTFCRDCI +KI  +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCK R EK PE  +  +   
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPN---

Query:  -SLPAKRKERSFSSLE
         SLP KRKE S+++ +
Subjt:  -SLPAKRKERSFSSLE

A0A6J1D078 E3 ubiquitin protein ligase DRIP2-like1.9e-62100Show/hide
Query:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
        MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
Subjt:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE

Query:  HPNSLPAKRKERSFSSLEI
        HPNSLPAKRKERSFSSLEI
Subjt:  HPNSLPAKRKERSFSSLEI

A0A6J1EA43 E3 ubiquitin protein ligase DRIP2-like1.5e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL+I
Subjt:  AKRKERSFSSLEI

A0A6J1IYE8 E3 ubiquitin protein ligase DRIP2-like2.5e-4680.53Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        VKV++EKL  CLTCPLC NLF +ATT+SECLHTFCRDCIY+KIT +ELEGCPVCNTNLGGVPLEKLRADHTMDDLREK FPC+RR EKAPET +   SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL I
Subjt:  AKRKERSFSSLEI

SwissProt top hitse value%identityAlignment
Q28H21 Polycomb group RING finger protein 17.3e-1138.37Show/hide
Query:  SDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGV-PLEKLRADHTMDDLREKIFP
        ++  VKVK ++L   + C LC   F +ATT++ECLHTFC+ CI   +   +   CP+CN  +    PL  L+ D  M D+  K+ P
Subjt:  SDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGV-PLEKLRADHTMDDLREKIFP

Q4QR06 Polycomb group RING finger protein 17.3e-1138.37Show/hide
Query:  SDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGV-PLEKLRADHTMDDLREKIFP
        ++  VKVK ++L   + C LC   F +ATT++ECLHTFC+ CI   +   +   CP+CN  +    PL  L+ D  M D+  K+ P
Subjt:  SDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGV-PLEKLRADHTMDDLREKIFP

Q94AY3 E3 ubiquitin protein ligase DRIP27.0e-3863.03Show/hide
Query:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
        M  D+  KVK E + AC+TCPLC  L  +ATT+SECLHTFCR CIY+KIT DE+E CPVC+ +LGG PLEKLR DH + DLR K+FP KR+ E+APE   
Subjt:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE

Query:  HPNSLPAKRKERSFSSLEI
           SLPAKRKERS SSL +
Subjt:  HPNSLPAKRKERSFSSLEI

Q9LS86 Probable E3 ubiquitin protein ligase DRIPH3.7e-2347.79Show/hide
Query:  KVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF-PCKRRMEKAPETAEHPNSLP
        KV S+++K CL CP+CTN F +ATT+SECLHTFCR CI +K   + +  CPVCN NLG  PLEKLR+D T  DL+ KI+      ++KA       +   
Subjt:  KVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF-PCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
        +K+K +S +SL +
Subjt:  AKRKERSFSSLEI

Q9M9Y4 E3 ubiquitin protein ligase DRIP12.1e-3461.95Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        +KVK E ++ACL+C +C N+  +ATT+SECLHTFCR CIY+KIT DE+E CPVCN +LG  PLEKLR DH + DLR KIF  KRR  KAP       SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL +
Subjt:  AKRKERSFSSLEI

Arabidopsis top hitse value%identityAlignment
AT1G03770.1 RING 1B1.1e-0435.82Show/hide
Query:  CPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF
        C +C  +     TV ECLH FCR+CI DK        CP C  +        LR D   D L   +F
Subjt:  CPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF

AT1G06770.1 DREB2A-interacting protein 11.5e-3561.95Show/hide
Query:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP
        +KVK E ++ACL+C +C N+  +ATT+SECLHTFCR CIY+KIT DE+E CPVCN +LG  PLEKLR DH + DLR KIF  KRR  KAP       SLP
Subjt:  VKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
         KRKERS SSL +
Subjt:  AKRKERSFSSLEI

AT2G30580.1 DREB2A-interacting protein 25.0e-3963.03Show/hide
Query:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE
        M  D+  KVK E + AC+TCPLC  L  +ATT+SECLHTFCR CIY+KIT DE+E CPVC+ +LGG PLEKLR DH + DLR K+FP KR+ E+APE   
Subjt:  MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAE

Query:  HPNSLPAKRKERSFSSLEI
           SLPAKRKERS SSL +
Subjt:  HPNSLPAKRKERSFSSLEI

AT3G23060.1 RING/U-box superfamily protein2.7e-2447.79Show/hide
Query:  KVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF-PCKRRMEKAPETAEHPNSLP
        KV S+++K CL CP+CTN F +ATT+SECLHTFCR CI +K   + +  CPVCN NLG  PLEKLR+D T  DL+ KI+      ++KA       +   
Subjt:  KVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF-PCKRRMEKAPETAEHPNSLP

Query:  AKRKERSFSSLEI
        +K+K +S +SL +
Subjt:  AKRKERSFSSLEI

AT5G44280.1 RING 1A2.1e-0533.78Show/hide
Query:  KLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF
        +++  + CP+C  +     TV ECLH FCR+CI DK        CP C  +        LR D   D L   +F
Subjt:  KLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTGATGTGGCGGTGAAAGTGAAGAGTGAGAAACTGAAGGCTTGTTTGACATGCCCTCTCTGCACAAACTTATTTGCCAATGCTACCACTGTATCAGAATGCCT
TCACACCTTTTGCAGGGATTGTATATATGACAAGATTACAGCAGACGAGTTGGAGGGTTGTCCCGTCTGCAACACTAATTTAGGGGGTGTCCCTCTCGAGAAACTCAGGG
CAGACCACACCATGGATGATCTGAGGGAAAAGATTTTCCCTTGCAAACGAAGGATGGAGAAGGCCCCTGAAACAGCAGAGCACCCAAATTCGCTGCCAGCCAAAAGAAAA
GAGAGATCGTTCTCTTCTTTAGAGATC
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTGATGTGGCGGTGAAAGTGAAGAGTGAGAAACTGAAGGCTTGTTTGACATGCCCTCTCTGCACAAACTTATTTGCCAATGCTACCACTGTATCAGAATGCCT
TCACACCTTTTGCAGGGATTGTATATATGACAAGATTACAGCAGACGAGTTGGAGGGTTGTCCCGTCTGCAACACTAATTTAGGGGGTGTCCCTCTCGAGAAACTCAGGG
CAGACCACACCATGGATGATCTGAGGGAAAAGATTTTCCCTTGCAAACGAAGGATGGAGAAGGCCCCTGAAACAGCAGAGCACCCAAATTCGCTGCCAGCCAAAAGAAAA
GAGAGATCGTTCTCTTCTTTAGAGATC
Protein sequenceShow/hide protein sequence
MGSDVAVKVKSEKLKACLTCPLCTNLFANATTVSECLHTFCRDCIYDKITADELEGCPVCNTNLGGVPLEKLRADHTMDDLREKIFPCKRRMEKAPETAEHPNSLPAKRK
ERSFSSLEI