; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS005944 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005944
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionrRNA-processing protein EFG1
Genome locationscaffold254:2597618..2600670
RNA-Seq ExpressionMS005944
SyntenyMS005944
Gene Ontology termsGO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030688 - preribosome, small subunit precursor (cellular component)
InterPro domainsIPR019310 - rRNA-processing protein Efg1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147510.1 rRNA-processing protein EFG1 isoform X1 [Momordica charantia]5.0e-16399.4Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFST+QRAEVSTSSNTSSGRSGSSFKPRGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

XP_022147511.1 rRNA-processing protein EFG1 isoform X2 [Momordica charantia]1.8e-16098.8Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN  QISARALMPPPRPTKSFPSSAQARLKTGSSLRKFST+QRAEVSTSSNTSSGRSGSSFKPRGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

XP_022946509.1 rRNA-processing protein EFG1 isoform X2 [Cucurbita moschata]4.1e-14992.79Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAV+KKPKSVSLKNQIRSAERMLRK LPA+VRE QEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTG DDSD VDRRNKLRKQIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFF+SGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDERN +QISARALMPPPRPTKSFPSSAQAR K GSSLRKFSTN+RAEVS+SSNTSS RSGSSFK RGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SN SHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

XP_022974417.1 rRNA-processing protein EFG1 isoform X2 [Cucurbita maxima]4.5e-14892.49Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAV+KKPKSVSLKNQIRSAERMLRK LPA+VRE QEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTG DDSD VDRRNKLRKQIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFF+SGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDERN +QISARALMPPPRPTKSFPSSAQAR K GSSLRKFSTN+RAEVS+SSNTSS RSGSSFK RGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SN S TG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

XP_038877104.1 rRNA-processing protein efg1-like isoform X1 [Benincasa hispida]1.6e-14893.11Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNP ARRSK LAV+KKPKSVSLKNQIRSAERMLRK LPA+VREAQEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQLQDSD+ADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLR+QIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFFL GSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN-QRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRG
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN QRQISAR LMPPPRPTKSF SSAQAR K GSSLRK STN RAE STSSNTS  RSGSSFK RG
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN-QRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRG

Query:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SSN SHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

TrEMBL top hitse value%identityAlignment
A0A6J1D0D0 rRNA-processing protein EFG12.4e-16399.4Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFST+QRAEVSTSSNTSSGRSGSSFKPRGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1D2L3 rRNA-processing protein EFG18.6e-16198.8Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN  QISARALMPPPRPTKSFPSSAQARLKTGSSLRKFST+QRAEVSTSSNTSSGRSGSSFKPRGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SNSSHTGQSSNISSNSDAHKPRRKRRPKKKK Q
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G412 rRNA-processing protein EFG12.0e-14992.79Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAV+KKPKSVSLKNQIRSAERMLRK LPA+VRE QEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTG DDSD VDRRNKLRKQIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFF+SGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDERN +QISARALMPPPRPTKSFPSSAQAR K GSSLRKFSTN+RAEVS+SSNTSS RSGSSFK RGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SN SHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1G415 rRNA-processing protein EFG14.9e-14892.24Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAV+KKPKSVSLKNQIRSAERMLRK LPA+VRE QEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTG DDSD VDRRNKLRKQIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFF+SGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN--QRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPR
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDERN  ++QISARALMPPPRPTKSFPSSAQAR K GSSLRKFSTN+RAEVS+SSNTSS RSGSSFK R
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERN--QRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPR

Query:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        GSSN SHTG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  GSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

A0A6J1IA73 rRNA-processing protein EFG12.2e-14892.49Show/hide
Query:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL
        MAHGGYGKRRVNPAARRSKALAV+KKPKSVSLKNQIRSAERMLRK LPA+VRE QEKKLEGLRKQQEI SRLAVERKIFLRDRKIKFFERRKIERRIRRL
Subjt:  MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRL

Query:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        EKLQRAPSGQ QDSDIADQLSKLKEDLEYVRFFPKTEKY+ALFTG DDSD VDRRNKLRKQIK NLIAAAASGKDLEETGSEDDGLLD+SEDDFF+SGSS
Subjt:  EKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS
        SDEADADDEWTDKS RE ASSTSGKAASGMSSDERN +QISARALMPPPRPTKSFPSSAQAR K GSSLRKFSTN+RAEVS+SSNTSS RSGSSFK RGS
Subjt:  SDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGS

Query:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        SN S TG SSNISSNSDAHKPRRKRRPKKKKQQ
Subjt:  SNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

SwissProt top hitse value%identityAlignment
A3LNR4 rRNA-processing protein EFG16.8e-0631.45Show/hide
Query:  GKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR
        GKRR N A   S  +A      +  LK +IR  ER+L+K  LPADVR   E+ ++ L+ + +        +++  +   ++FFE++K  R++++  K   
Subjt:  GKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQR

Query:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQ
          S      DI     ++K    DL YV  FPK+EKY++L+    ++D VD  N   K+
Subjt:  APSGQLQDSDIADQLSKLKE---DLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQ

A6ZUS8 rRNA-processing protein EFG12.9e-0428Show/hide
Query:  RRSKALAVDKKPKSV------SLKNQIRSAERMLRK---ILPADVREAQEKKLEGLR---KQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL
        +RSKAL    +   +       +K +IR  ER+L+K   ILP+ V   +E+ L+ LR   +  E+++++    K +     ++FFE++K  R+  RL  L
Subjt:  RRSKALAVDKKPKSV------SLKNQIRSAERMLRK---ILPADVREAQEKKLEGLR---KQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKL

Query:  QRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF---TGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS
        ++       D D+  +L   K +L YV  FPKTEKY+AL+   T   D   V+  N  R+Q    L+A       L  +  E      L ED   L+ S 
Subjt:  QRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALF---TGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSS

Query:  SDEADADDEWTDKSTREQASSTSGK
          + +   + +    R++     G+
Subjt:  SDEADADDEWTDKSTREQASSTSGK

A8N5J5 rRNA-processing protein EFG11.3e-0424.78Show/hide
Query:  KALAVDKKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIA
        KA A+  K K   +K+ +R   R+L K  L AD R   E++L+ L  + +   +   ER + +R  K+KFFER+K+ R++ ++++   +  G  +   + 
Subjt:  KALAVDKKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIA

Query:  DQLSKLKEDLEYVRFFPKTEKYVALF-----------TGGDDSDMVDR-RNKLRKQIKDNLIAAAASGKDLEETGS--------------------EDDG
         QL + + +L Y+  +PKT+KY++LF               D++  +R R ++R+ I+D++       +   + GS                       G
Subjt:  DQLSKLKEDLEYVRFFPKTEKYVALF-----------TGGDDSDMVDR-RNKLRKQIKDNLIAAAASGKDLEETGS--------------------EDDG

Query:  LL------DLSEDDFFLSGSSSDEADADDE
        +       D+ +D+FF + S  D  + +DE
Subjt:  LL------DLSEDDFFLSGSSSDEADADDE

Q09867 rRNA-processing protein efg19.2e-1134.51Show/hide
Query:  KKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK
        K P    LK +IR  ER+L+K  LPA++R   E+ L GL++Q  +      ++KIF R +K++FFER+K ERRI++LEK L+       +       + K
Subjt:  KKPKSVSLKNQIRSAERMLRK-ILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEK-LQRAPSGQLQDSDIADQLSK

Query:  LKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKD
         + DL Y++ +P   KYV+L+  G      + RN++  ++++
Subjt:  LKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKD

Q5AK42 rRNA-processing protein EFG19.9e-0529.17Show/hide
Query:  SVSLKNQIRSAERMLRK--ILPADVREAQEKKLEGLR---KQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKL
        S  +K +IR  ER+++K   LPAD +   ++ L+GL+   +  ++Q++  V  K +     ++FFER+K  R+++ L K     S      DI     +L
Subjt:  SVSLKNQIRSAERMLRK--ILPADVREAQEKKLEGLR---KQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQLQDSDIADQLSKL

Query:  KE---DLEYVRFFPKTEKYVALFTGGDDSDMVD------------RRNKLRKQIKDNLIAAAASGKDLEE---TGSEDDGLLDLS---EDDFFLSGSSSD
        +    DL YV  FPKTEKY++L+   +D D  D            RR + RK I+          K +EE     S DD L   +   ++D       ++
Subjt:  KE---DLEYVRFFPKTEKYVALFTGGDDSDMVD------------RRNKLRKQIKDNLIAAAASGKDLEE---TGSEDDGLLDLS---EDDFFLSGSSSD

Query:  EADADDEWTDKSTREQ
        E DA ++  D+   EQ
Subjt:  EADADDEWTDKSTREQ

Arabidopsis top hitse value%identityAlignment
AT1G04230.1 Protein of unknown function (DUF2361)5.4e-9965Show/hide
Query:  MAHGGYGKRRVNP------AARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY +RRV         +RRSK L V+KKPK+ SLKNQIRS  RM+RK LP +VREA EKKL+ L+KQQ+I  RLA ERKIFLR+RK++FFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDD
        R IRRLEKL R+ S G +QD++I  QL++LKEDLEYVRFFPK EKYV+LF+G DD  + +RR+KLRKQIK N+I AAASGK+LEETGSEDD LLDLS+DD
Subjt:  RRIRRLEKLQRAPS-GQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDD

Query:  FFLSGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGS
        FF++GSSSDEADADDEWTDKST+E  SS SG+A S MSSDERNQ+  S R LMPPPR             +  S+ R++S+ +R E+ +SSNTS  RS S
Subjt:  FFLSGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGS

Query:  SFKPRGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        S     ++ SSHT QSSN+SSNSDAHKP+RKRRPKKKK Q
Subjt:  SFKPRGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ

AT5G43720.1 Protein of unknown function (DUF2361)4.4e-10165.19Show/hide
Query:  MAHGGYGKRRVNP------AARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIE
        MAHGGY KRR +       ++RRSK L V+KKPK+VS+KNQ+RS ER LRK LP +VRE+  +KLE L+KQQ+  +RLAVERKIF R+RKIKFFERRKIE
Subjt:  MAHGGYGKRRVNP------AARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIE

Query:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDF
        R IRRLEKLQR  S  + D DIA+QLSKLKEDLEYVRFFPK EKYV+LFTG +DS+++++R K+R+QIK N+I AAASGK+LEETGSEDDGLLDLS+DDF
Subjt:  RRIRRLEKLQRAPSGQLQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDF

Query:  FLSGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSS
        F  GSSSDEADADDE TDKS +E ASS SG+A SGMSSDERNQ+Q S RALMPPP          QAR ++ S    +        S+ +NTS+ RS SS
Subjt:  FLSGSSSDEADADDEWTDKSTREQASSTSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSS

Query:  FKPRGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ
        +  R S+ +S++ QSSN+SSNSDAHKP+RKRRPKKKKQQ
Subjt:  FKPRGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKKKQQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCACGGTGGCTACGGCAAGCGCAGAGTCAACCCCGCCGCCCGCCGATCCAAGGCTTTGGCGGTGGACAAGAAGCCCAAGTCCGTTTCCCTCAAGAACCAGATTCG
ATCTGCTGAGCGCATGCTTCGCAAGATTTTACCTGCTGATGTGAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCAGTCCCGGTTGGCTG
TTGAGCGCAAAATATTCTTGCGAGATAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGACGACTTGAAAAACTGCAACGTGCTCCATCTGGCCAG
TTGCAAGATTCAGATATTGCAGATCAATTGTCTAAGTTGAAAGAGGATCTCGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACTGGAGGTGA
TGATTCAGACATGGTTGATAGGAGGAATAAGTTGCGCAAGCAGATTAAAGACAATCTGATTGCTGCTGCAGCCAGTGGAAAGGATTTAGAAGAGACTGGTAGTGAGGATG
ATGGATTACTTGACCTGAGTGAGGATGATTTCTTCTTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGGACTGATAAAAGTACAAGGGAACAGGCGTCC
AGTACTTCTGGCAAAGCAGCATCTGGCATGTCCAGTGATGAAAGAAATCAGAGGCAGATTTCTGCTAGAGCCTTAATGCCGCCGCCTCGTCCAACGAAATCATTCCCGAG
TTCCGCTCAAGCTCGGTTAAAAACTGGATCTTCATTGAGAAAATTTTCAACAAATCAGAGGGCTGAGGTTTCTACATCCAGCAATACATCAAGTGGTAGAAGTGGATCCT
CTTTTAAGCCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATTAGTTCCAATTCCGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAGAAGAAG
AAACAGCAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTCACGGTGGCTACGGCAAGCGCAGAGTCAACCCCGCCGCCCGCCGATCCAAGGCTTTGGCGGTGGACAAGAAGCCCAAGTCCGTTTCCCTCAAGAACCAGATTCG
ATCTGCTGAGCGCATGCTTCGCAAGATTTTACCTGCTGATGTGAGGGAGGCTCAAGAAAAGAAGTTGGAAGGACTTAGAAAACAGCAAGAAATTCAGTCCCGGTTGGCTG
TTGAGCGCAAAATATTCTTGCGAGATAGGAAGATAAAATTTTTTGAGAGGAGAAAAATTGAAAGAAGAATTAGACGACTTGAAAAACTGCAACGTGCTCCATCTGGCCAG
TTGCAAGATTCAGATATTGCAGATCAATTGTCTAAGTTGAAAGAGGATCTCGAATATGTCAGGTTCTTTCCCAAAACAGAAAAATATGTAGCTTTATTTACTGGAGGTGA
TGATTCAGACATGGTTGATAGGAGGAATAAGTTGCGCAAGCAGATTAAAGACAATCTGATTGCTGCTGCAGCCAGTGGAAAGGATTTAGAAGAGACTGGTAGTGAGGATG
ATGGATTACTTGACCTGAGTGAGGATGATTTCTTCTTATCTGGTAGCTCAAGTGATGAAGCAGATGCAGATGATGAATGGACTGATAAAAGTACAAGGGAACAGGCGTCC
AGTACTTCTGGCAAAGCAGCATCTGGCATGTCCAGTGATGAAAGAAATCAGAGGCAGATTTCTGCTAGAGCCTTAATGCCGCCGCCTCGTCCAACGAAATCATTCCCGAG
TTCCGCTCAAGCTCGGTTAAAAACTGGATCTTCATTGAGAAAATTTTCAACAAATCAGAGGGCTGAGGTTTCTACATCCAGCAATACATCAAGTGGTAGAAGTGGATCCT
CTTTTAAGCCTAGGGGATCCTCAAACTCCTCGCATACAGGTCAGAGCAGTAATATTAGTTCCAATTCCGATGCTCACAAACCCCGAAGAAAGAGGAGGCCAAAGAAGAAG
AAACAGCAG
Protein sequenceShow/hide protein sequence
MAHGGYGKRRVNPAARRSKALAVDKKPKSVSLKNQIRSAERMLRKILPADVREAQEKKLEGLRKQQEIQSRLAVERKIFLRDRKIKFFERRKIERRIRRLEKLQRAPSGQ
LQDSDIADQLSKLKEDLEYVRFFPKTEKYVALFTGGDDSDMVDRRNKLRKQIKDNLIAAAASGKDLEETGSEDDGLLDLSEDDFFLSGSSSDEADADDEWTDKSTREQAS
STSGKAASGMSSDERNQRQISARALMPPPRPTKSFPSSAQARLKTGSSLRKFSTNQRAEVSTSSNTSSGRSGSSFKPRGSSNSSHTGQSSNISSNSDAHKPRRKRRPKKK
KQQ