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MS005969 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005969
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationscaffold254:2790933..2791082
RNA-Seq ExpressionMS005969
SyntenyMS005969
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597420.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]4.9e-2288Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRS+CGRCWPC PVHVPIQPG+S PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

RWR93141.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cinnamomum micranthum f. kanehirae]1.9e-2188Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRCWPC PVHVPIQPG   PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

XP_021606945.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Manihot esculenta]1.9e-2190Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC+PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

XP_030508149.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cannabis sativa]2.2e-2294Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC PC PVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

XP_038905188.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]4.9e-2290Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GSCPPTCR+KCGRC PC+PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

TrEMBL top hitse value%identityAlignment
A0A067L843 Epidermal patterning factor-like protein2.0e-2190Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

A0A2C9W8D5 Epidermal patterning factor-like protein9.0e-2290Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC+PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

A0A3S3P4G4 Epidermal patterning factor-like protein9.0e-2288Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRCWPC PVHVPIQPG   PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

A0A7J6E4U4 Epidermal patterning factor-like protein1.1e-2294Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC PC PVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

B9RTK3 Epidermal patterning factor-like protein2.6e-2190Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCGRC PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.2e-1872Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 41.2e-2388Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCG+C PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Q7M1E7 Polygalacturonase4.6e-0740.82Show/hide
Query:  SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        S PP C++KC  C PC P  + + P  + P +YYP+ W C C N ++ P
Subjt:  SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Q9FY19 Polygalacturonase6.0e-0740.82Show/hide
Query:  SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        S PP C++KC  C PC P  + + P  + P +YYP+ W C C N ++ P
Subjt:  SCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 51.6e-2080Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PP CR KCG+C PC  VHVPIQPGL  PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related8.3e-2072Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

AT2G30370.2 allergen-related8.3e-2072Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PP C SKCGRC PC PVHVP+ PG     EYYPEAWRCKCGN L+MP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

AT3G13898.1 unknown protein4.4e-0544.68Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPI---QPGLS-FPLEYYPEAWRCKC
        GS PP+C  KC  C PC+ +  P     P LS     Y PE WRC C
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPI---QPGLS-FPLEYYPEAWRCKC

AT3G22820.1 allergen-related1.2e-2180Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PP CR KCG+C PC  VHVPIQPGL  PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)8.6e-2588Show/hide
Query:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP
        GS PPTCRSKCG+C PC PVHVPIQPGLS PLEYYPEAWRCKCGN LFMP
Subjt:  GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGATCGTGTCCGCCCACGTGCAGATCCAAGTGCGGCCGGTGCTGGCCCTGCGACCCGGTCCACGTCCCAATTCAACCCGGTCTAAGCTTTCCATTGGAGTATTACCCAGA
AGCTTGGCGATGTAAGTGCGGGAACAACCTCTTCATGCCT
mRNA sequenceShow/hide mRNA sequence
GGATCGTGTCCGCCCACGTGCAGATCCAAGTGCGGCCGGTGCTGGCCCTGCGACCCGGTCCACGTCCCAATTCAACCCGGTCTAAGCTTTCCATTGGAGTATTACCCAGA
AGCTTGGCGATGTAAGTGCGGGAACAACCTCTTCATGCCT
Protein sequenceShow/hide protein sequence
GSCPPTCRSKCGRCWPCDPVHVPIQPGLSFPLEYYPEAWRCKCGNNLFMP