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MS005997 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS005997
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold254:3014711..3015146
RNA-Seq ExpressionMS005997
SyntenyMS005997
Gene Ontology termsGO:0001172 - transcription, RNA-templated (biological process)
GO:0003968 - RNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2014580.1 hypothetical protein ES319_D09G235500v1 [Gossypium barbadense]2.0e-2291.07Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAP
        MGWLQSLFSPLKKLWFRLHS+ +KR+GIYILYEDVKSCPCEDVHVLWSILVES+AP
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAP

KAG5587814.1 hypothetical protein H5410_048248 [Solanum commersonii]4.1e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

KAG6597448.1 hypothetical protein SDJN03_10628, partial [Cucurbita argyrosperma subsp. sororia]6.3e-2494.64Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAP
        MGWLQSLFSPLKKLWFRLHSSP+KR+GIYILYEDVKSCPCEDVHVLWSILVESH P
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAP

KGN56989.1 hypothetical protein Csa_010650 [Cucumis sativus]1.2e-2796.72Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ
        MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESH PLPPKQ
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ

PHT38775.1 hypothetical protein CQW23_22348 [Capsicum baccatum]4.9e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7K5 Uncharacterized protein6.0e-2896.72Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ
        MGWLQSLFSPLKKLWFRLHSSPKKR+GIYILYEDVKSCPCEDVHVLWSILVESH PLPPKQ
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ

A0A0V0GKY9 Putative ovule protein2.0e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

A0A2G2W0L8 Uncharacterized protein2.4e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

A0A2G2ZVG2 Uncharacterized protein2.4e-2488.71Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH  PLPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

M1CYA3 Uncharacterized protein2.0e-2387.1Show/hide
Query:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ
        MGWLQSLFSPLKKLWFRLHS+PKKR+GIYILYEDVKSCPCEDV VLWSILVESH   LPP++
Subjt:  MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHA-PLPPKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCCAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTCAAATC
CTGCCCCTGTGAAGATGTCCATGTGCTCTGGTCAATTCTAGTGGAATCACATGCTCCATTGCCACCAAAACAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTGGCTCCAATCCCTCTTCTCCCCATTGAAGAAGCTCTGGTTTCGCCTCCATTCTTCGCCCAAAAAACGTAAAGGGATATATATTCTGTATGAGGATGTCAAATC
CTGCCCCTGTGAAGATGTCCATGTGCTCTGGTCAATTCTAGTGGAATCACATGCTCCATTGCCACCAAAACAA
Protein sequenceShow/hide protein sequence
MGWLQSLFSPLKKLWFRLHSSPKKRKGIYILYEDVKSCPCEDVHVLWSILVESHAPLPPKQ