; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006006 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006006
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionphotosystem I reaction center subunit II, chloroplastic
Genome locationscaffold254:3074958..3075572
RNA-Seq ExpressionMS006006
SyntenyMS006006
Gene Ontology termsGO:0015979 - photosynthesis (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009538 - photosystem I reaction center (cellular component)
InterPro domainsIPR003685 - Photosystem I PsaD
IPR036579 - Photosystem I, reaction centre subunit PsaD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018694.1 Photosystem I reaction center subunit II, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-9990.91Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE--ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV
        MAMAAQATLFTPSLSTPKS AV IPWKQS  LSF+NSKPL KP ++ R+VK++AEAE  A TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE--ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV

Query:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVK
        ITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVK
Subjt:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVK

Query:  FTGKQVYDL
        FTGKQVYDL
Subjt:  FTGKQVYDL

XP_022137805.1 photosystem I reaction center subunit II, chloroplastic [Momordica charantia]5.1e-110100Show/hide
Query:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE
        MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE
Subjt:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE

Query:  SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK
        SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK
Subjt:  SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK

Query:  QVYDL
        QVYDL
Subjt:  QVYDL

XP_022955930.1 photosystem I reaction center subunit II, chloroplastic [Cucurbita moschata]3.1e-9991.35Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
        MAMAAQATLFTPSLSTPKS AV IPWKQS  LSF+NSKPL KP ++ R+VK++AEAE A TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI

Query:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF
        TWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKF
Subjt:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF

Query:  TGKQVYDL
        TGKQVYDL
Subjt:  TGKQVYDL

XP_023528925.1 photosystem I reaction center subunit II, chloroplastic [Cucurbita pepo subsp. pepo]4.1e-9990.91Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE--ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV
        MAMAAQATLFTPSLSTPKS AV IPWKQS  LSF+NSKPL KP ++ R+VK++AEAE  A TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE--ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYV

Query:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVK
        ITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVK
Subjt:  ITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVK

Query:  FTGKQVYDL
        FTGKQVYDL
Subjt:  FTGKQVYDL

XP_038876164.1 photosystem I reaction center subunit II, chloroplastic [Benincasa hispida]1.3e-10091.3Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
        MAMAAQATLFTPSLSTPKS A+ +PWKQSP LSF+NSKP LKP S+ R +K++AEAEA  EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT

Query:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT
        WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKFT
Subjt:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT

Query:  GKQVYDL
        GKQVYDL
Subjt:  GKQVYDL

TrEMBL top hitse value%identityAlignment
A0A5D3D399 Photosystem I reaction center subunit II5.7e-9990.34Show/hide
Query:  MAMAAQATLFTPSLSTPK-SAVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
        MAMA QATLFTPSLSTPK SA+ IPWKQSP LSFL SKP LK  S+ R +K++AEAEA  EAPAGF+PPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
Subjt:  MAMAAQATLFTPSLSTPK-SAVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT

Query:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT
        WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKFT
Subjt:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT

Query:  GKQVYDL
        GKQVYDL
Subjt:  GKQVYDL

A0A6J1C7Q1 photosystem I reaction center subunit II, chloroplastic2.5e-110100Show/hide
Query:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE
        MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE
Subjt:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWE

Query:  SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK
        SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK
Subjt:  SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGK

Query:  QVYDL
        QVYDL
Subjt:  QVYDL

A0A6J1GWF9 photosystem I reaction center subunit II, chloroplastic1.5e-9991.35Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
        MAMAAQATLFTPSLSTPKS AV IPWKQS  LSF+NSKPL KP ++ R+VK++AEAE A TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI

Query:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF
        TWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKF
Subjt:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF

Query:  TGKQVYDL
        TGKQVYDL
Subjt:  TGKQVYDL

A0A6J1ICA2 photosystem I reaction center subunit II, chloroplastic-like4.4e-9990.34Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
        MAMAAQATLFTPSL+TPKS A  +PWKQSP LSFLN+KPL   S+ RLVK++AEAE A  EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT

Query:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT
        WESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKFT
Subjt:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT

Query:  GKQVYDL
        GKQVYDL
Subjt:  GKQVYDL

A0A6J1INM6 photosystem I reaction center subunit II, chloroplastic5.7e-9990.87Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
        MAMAAQATLFTPSLSTPKS AV IPWKQS  L F+NSKPL KP ++ R+VK++AEAE A TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKPL-KPTSAPRLVKIAAEAE-ATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI

Query:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF
        TWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKF
Subjt:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF

Query:  TGKQVYDL
        TGKQVYDL
Subjt:  TGKQVYDL

SwissProt top hitse value%identityAlignment
P12353 Photosystem I reaction center subunit II, chloroplastic4.2e-8376.39Show/hide
Query:  MAMAAQATLFTP-SLSTPK---SAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEA-------TTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKA
        MAMA QATLF+P SLS+ K   + +   +KQ  A++F +    KP S    ++ AA AE        T EAP GF+PPELDP+TPSPIFAGSTGGLLRKA
Subjt:  MAMAAQATLFTP-SLSTPK---SAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEA-------TTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKA

Query:  QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKN
        QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFP+GEVQYLHPKDGVYPEKVNPGRQGVG N RSIGKN
Subjt:  QVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKN

Query:  ISPIEVKFTGKQVYDL
        +SPIEVKFTGKQ YDL
Subjt:  ISPIEVKFTGKQVYDL

P12372 Photosystem I reaction center subunit II, chloroplastic1.8e-8680.95Show/hide
Query:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPT-SAPRLVK-IAAEAEATTE---APAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFY
        MAMA QA+LFTP LS PKS    PWKQS  +SF   K LK T S  R ++ +A EA A TE   APAGF+PP+LDP+TPSPIF GSTGGLLRKAQVEEFY
Subjt:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPT-SAPRLVK-IAAEAEATTE---APAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFY

Query:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEV
        VITWESPKEQIFEMPTGGAAIMR+GPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN S IEV
Subjt:  VITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEV

Query:  KFTGKQVYDL
        KFTGKQVYD+
Subjt:  KFTGKQVYDL

P29302 Photosystem I reaction center subunit II, chloroplastic2.2e-8781.73Show/hide
Query:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPT-SAPRLVKIAAEAEAT--TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI
        MAMA QA+LFTP+LS PKS+   PWKQS  L+  + K LK T SAPR ++  AE  AT   EAP GF+PP+LDP+TPSPIF GSTGGLLRKAQVEEFYVI
Subjt:  MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPT-SAPRLVKIAAEAEAT--TEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVI

Query:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF
        TWESPKEQIFEMPTGGAAIMREG NLLKLARKEQCLALGTRLRSKYKI Y+FYRVFPNGEVQYLHPKDGVYPEKVN GRQGVGQNFRSIGKN SPIEVKF
Subjt:  TWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKF

Query:  TGKQVYDL
        TGKQVYDL
Subjt:  TGKQVYDL

P32869 Photosystem I reaction center subunit II, chloroplastic6.5e-10089.37Show/hide
Query:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
        MAMA QATLFTPSLSTPKS  + IPWKQS  LSFL SKP LK  S+ R  K++AEAE + EAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT
Subjt:  MAMAAQATLFTPSLSTPKS-AVKIPWKQSPALSFLNSKP-LKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVIT

Query:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT
        WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGR+GVGQNFRSIGKN+SPIEVKFT
Subjt:  WESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFT

Query:  GKQVYDL
        GKQVYDL
Subjt:  GKQVYDL

Q9S7H1 Photosystem I reaction center subunit II-1, chloroplastic2.0e-7790.32Show/hide
Query:  AAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFY
        AA A AT EAP GF+PP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFY
Subjt:  AAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFY

Query:  RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQVYDL
        RVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKN+SPIEVKFTGKQ YDL
Subjt:  RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQVYDL

Arabidopsis top hitse value%identityAlignment
AT1G03130.1 photosystem I subunit D-24.2e-7873.53Show/hide
Query:  MAAQAT-LFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWES
        MA QA  +F+P+++T  SAVK     S +    +    K        + ++ A A  EAP GF+PP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW S
Subjt:  MAAQAT-LFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWES

Query:  PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQ
        PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFYRVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKN+SPIEVKFTGKQ
Subjt:  PKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQ

Query:  VYDL
         YDL
Subjt:  VYDL

AT4G02770.1 photosystem I subunit D-11.5e-7890.32Show/hide
Query:  AAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFY
        AA A AT EAP GF+PP+LDP+TPSPIFAGSTGGLLRKAQVEEFYVITW SPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKI YQFY
Subjt:  AAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMPTGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFY

Query:  RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQVYDL
        RVFPNGEVQYLHPKDGVYPEK NPGR+GVG N RSIGKN+SPIEVKFTGKQ YDL
Subjt:  RVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQVYDL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATGGCGGCTCAAGCAACCCTCTTCACCCCCTCCCTCTCCACCCCCAAATCCGCCGTCAAAATCCCATGGAAGCAATCCCCAGCTCTCTCCTTCCTCAACTCCAA
GCCCCTCAAGCCCACATCCGCCCCCCGATTGGTCAAGATCGCCGCCGAGGCCGAGGCCACCACGGAGGCCCCAGCCGGATTCTCCCCGCCGGAGCTCGACCCTAGTACCC
CCTCCCCGATCTTCGCCGGCAGCACCGGGGGCCTGCTCCGGAAGGCCCAGGTCGAGGAATTCTATGTCATTACATGGGAGTCCCCGAAGGAGCAGATCTTCGAGATGCCC
ACCGGCGGCGCCGCCATCATGAGGGAGGGCCCCAATTTGCTGAAATTGGCCAGGAAAGAGCAGTGCCTTGCTCTGGGAACCAGGCTGCGCTCCAAGTACAAGATCAAGTA
CCAATTCTACAGGGTGTTCCCCAATGGGGAGGTTCAGTATTTGCATCCCAAAGATGGCGTGTACCCTGAGAAGGTCAACCCTGGGCGCCAAGGCGTGGGGCAGAACTTCA
GATCCATTGGGAAGAATATCAGCCCCATTGAGGTGAAGTTCACTGGCAAACAAGTGTATGACTTG
mRNA sequenceShow/hide mRNA sequence
ATGGCCATGGCGGCTCAAGCAACCCTCTTCACCCCCTCCCTCTCCACCCCCAAATCCGCCGTCAAAATCCCATGGAAGCAATCCCCAGCTCTCTCCTTCCTCAACTCCAA
GCCCCTCAAGCCCACATCCGCCCCCCGATTGGTCAAGATCGCCGCCGAGGCCGAGGCCACCACGGAGGCCCCAGCCGGATTCTCCCCGCCGGAGCTCGACCCTAGTACCC
CCTCCCCGATCTTCGCCGGCAGCACCGGGGGCCTGCTCCGGAAGGCCCAGGTCGAGGAATTCTATGTCATTACATGGGAGTCCCCGAAGGAGCAGATCTTCGAGATGCCC
ACCGGCGGCGCCGCCATCATGAGGGAGGGCCCCAATTTGCTGAAATTGGCCAGGAAAGAGCAGTGCCTTGCTCTGGGAACCAGGCTGCGCTCCAAGTACAAGATCAAGTA
CCAATTCTACAGGGTGTTCCCCAATGGGGAGGTTCAGTATTTGCATCCCAAAGATGGCGTGTACCCTGAGAAGGTCAACCCTGGGCGCCAAGGCGTGGGGCAGAACTTCA
GATCCATTGGGAAGAATATCAGCCCCATTGAGGTGAAGTTCACTGGCAAACAAGTGTATGACTTG
Protein sequenceShow/hide protein sequence
MAMAAQATLFTPSLSTPKSAVKIPWKQSPALSFLNSKPLKPTSAPRLVKIAAEAEATTEAPAGFSPPELDPSTPSPIFAGSTGGLLRKAQVEEFYVITWESPKEQIFEMP
TGGAAIMREGPNLLKLARKEQCLALGTRLRSKYKIKYQFYRVFPNGEVQYLHPKDGVYPEKVNPGRQGVGQNFRSIGKNISPIEVKFTGKQVYDL