CuGenDBv2

Gene ID	MS006019
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Genome location	scaffold254:3196561..3197033
RNA-Seq Expression	MS006019
Synteny	MS006019
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6597461.1 hypothetical protein SDJN03_10641, partial [Cucurbita argyrosperma subsp. sororia]

9.2e-46

83.33

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA  AAY GVSKGTGVFIPRSLQ  RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPI IDVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

KAG7028920.1 hypothetical protein SDJN02_10103 [Cucurbita argyrosperma subsp. argyrosperma]

9.2e-46

83.33

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA  AAY GVSKGTGVFIPRSLQ  RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPI IDVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

XP_022933798.1 uncharacterized protein LOC111441102 [Cucurbita moschata]

3.2e-46

83.33

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA   AY GVSKGTGVFIPRSLQP RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPI IDVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

XP_022973676.1 uncharacterized protein LOC111472261 [Cucurbita maxima]

3.7e-47

84.13

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA  AAY GVSKGTGVFIPRSLQP RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPIT+DVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

XP_023539236.1 uncharacterized protein LOC111799938 [Cucurbita pepo subsp. pepo]

4.1e-46

83.33

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA  AAY GVSKGTGVFIPRSLQP RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPI IDVNSQVS+N+SL PKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAE7 Uncharacterized protein

3.8e-45

81.1

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA---AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLPHPHVSLQA SHG H+P RP+A H+HAAA   AAAY GVSKGTGVFIPRSLQP RKQRRGR+   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA---AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQV-SSNHSLRPKK
        K NRQF I+IDVNSQV S+NHS+RPKK
Subjt:  KGNRQFPITIDVNSQV-SSNHSLRPKK

A0A1S3AX25 uncharacterized protein LOC103483733

5.4e-44

80.95

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA--AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNIK
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP PHVSLQA SHG H+P RP+A H+HAAA  AAAY GVSKGTGVFIPRSLQP RKQRRGR+   NNIK
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA--AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNIK

Query:  GNRQFPITIDVNSQVSS-NHSLRPKK
         NRQF I+IDVNSQVSS NH +RPKK
Subjt:  GNRQFPITIDVNSQVSS-NHSLRPKK

A0A5D3D068 Uncharacterized protein

5.4e-44

80.95

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA--AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNIK
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP PHVSLQA SHG H+P RP+A H+HAAA  AAAY GVSKGTGVFIPRSLQP RKQRRGR+   NNIK
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAA--AAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNIK

Query:  GNRQFPITIDVNSQVSS-NHSLRPKK
         NRQF I+IDVNSQVSS NH +RPKK
Subjt:  GNRQFPITIDVNSQVSS-NHSLRPKK

A0A6J1F5U9 uncharacterized protein LOC111441102

1.5e-46

83.33

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA   AY GVSKGTGVFIPRSLQP RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPI IDVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

A0A6J1I9A5 uncharacterized protein LOC111472261

1.8e-47

84.13

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI
        MEVALE+EDDLFFADLSRQLSLLLMD+NEDPLP HPHVSLQA +HGGH PARP+A HD AAAA  AAY GVSKGTGVFIPRSLQP RKQRRGRY   NNI
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAA--AAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNI

Query:  KGNRQFPITIDVNSQVSSNHSLRPKK
        K NRQFPIT+DVNSQVS+N+SLRPKK
Subjt:  KGNRQFPITIDVNSQVSSNHSLRPKK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06070.1 unknown protein

1.3e-08

43.68

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENE-DPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAAAAYIGVSKGTGVFIPRSLQPVRK
        M + LE++DD+FFAD+S+QL+LL+ DE+E +P+     VS Q    G +  +       +       I  SKGTGVFIPRS QP RK
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENE-DPLP-HPHVSLQAFSHGGHHPARPVAAHDHAAAAAAYIGVSKGTGVFIPRSLQPVRK

AT5G19190.1 unknown protein

2.3e-10

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Query:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP------HPHVSLQAFSHGGHHPARPVAAHDHAAAAAAYIGVSKGTGVFIPRSLQPVRK----QRRGR
        M + LE++DD+FFAD+S+Q+SLL+MDE+E   P         +S Q    GG+  A  +   +           SKGTGVFIP+S QP R+    Q++GR
Subjt:  MEVALEVEDDLFFADLSRQLSLLLMDENEDPLP------HPHVSLQAFSHGGHHPARPVAAHDHAAAAAAYIGVSKGTGVFIPRSLQPVRK----QRRGR

Query:  YNNNN
        Y++ N
Subjt:  YNNNN

Sequences

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CDS sequence

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ATGGAAGTAGCTTTGGAAGTGGAAGATGATTTGTTCTTTGCAGATTTGAGCAGACAGCTCTCTCTTCTTCTCATGGATGAGAACGAAGATCCTCTCCCTCACCCACATGT
ATCTCTTCAGGCTTTCTCACATGGAGGCCACCACCCCGCCCGGCCGGTGGCGGCGCATGACCATGCCGCCGCAGCCGCCGCCTACATAGGCGTGAGCAAGGGGACCGGCG
TGTTCATCCCCCGGTCGCTGCAGCCGGTGAGGAAACAGAGGCGTGGAAGATACAACAACAACAACAACATAAAGGGAAACCGGCAGTTTCCAATCACTATTGATGTGAAC
TCCCAAGTATCTTCCAACCATTCGTTGCGTCCCAAAAAGAGT

mRNA sequence

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Protein sequence

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MEVALEVEDDLFFADLSRQLSLLLMDENEDPLPHPHVSLQAFSHGGHHPARPVAAHDHAAAAAAYIGVSKGTGVFIPRSLQPVRKQRRGRYNNNNNIKGNRQFPITIDVN
SQVSSNHSLRPKKS

MS006019 (gene) of Bitter gourd (TR) v1 genome