CuGenDBv2

Gene ID	MS006030
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	EF-hand calcium-binding domain-containing protein 4A
Genome location	scaffold254:3268414..3268845
RNA-Seq Expression	MS006030
Synteny	MS006030
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008438723.1 PREDICTED: uncharacterized protein LOC103483746 [Cucumis melo]

2.9e-67

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTR+WN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQY+SLEDLREFSEIRIFRDHQRGC+S+RKKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

XP_011650993.1 uncharacterized protein LOC105434839 [Cucumis sativus]

1.9e-66

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTRIWN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQY+SLEDLREFSEIRIFRDHQRGC+S+RKK RPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

XP_022138034.1 uncharacterized protein LOC111009291 [Momordica charantia]

4.7e-78

99.31

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPGLGVF LGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

XP_022936946.1 uncharacterized protein LOC111443378 [Cucurbita moschata]

3.5e-65

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTRIWN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQ+ISLEDLREFSEIRIFRDHQRGCVS+RKKPR  FC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

XP_038875149.1 uncharacterized protein LOC120067683 [Benincasa hispida]

2.4e-66

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTRIWN+SDR VE+QIRVGSILK+VH+LKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQYISLEDLREFSEIRIFRDHQRGCVS+ KKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8V0 Uncharacterized protein

9.1e-67

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTRIWN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQY+SLEDLREFSEIRIFRDHQRGC+S+RKK RPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

A0A1S3AWR3 uncharacterized protein LOC103483746

1.4e-67

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTR+WN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQY+SLEDLREFSEIRIFRDHQRGC+S+RKKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

A0A5A7U2C9 Uncharacterized protein

1.4e-67

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTR+WN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQY+SLEDLREFSEIRIFRDHQRGC+S+RKKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

A0A6J1C8Y4 uncharacterized protein LOC111009291

2.3e-78

99.31

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPGLGVF LGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

A0A6J1F8W2 uncharacterized protein LOC111443378

1.7e-65

85.42

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Query:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG
        MPG GVF LG CFDGC +H  ASG GTRIWN+SDR VE+QIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMP  GRSMKSLLYYYD+A QPYVWIHE+GG
Subjt:  MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGG

Query:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC
        DS+RMVKQQ+ISLEDLREFSEIRIFRDHQRGCVS+RKKPR  FC
Subjt:  DSIRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G06145.1 unknown protein

8.2e-36

53.62

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Query:  LGRCFDGCVEHG-----GASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPG-TGRSMKSLLYYYDQASQPYVWIHETGGDS
        L +C+ GC +         +   TR WN+SDR VE+QIRVGSILK+VH+LKPG SK+L+ +SI++AY+    GR       YYD    PYVW+HETG D 
Subjt:  LGRCFDGCVEHG-----GASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPG-TGRSMKSLLYYYDQASQPYVWIHETGGDS

Query:  IRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPR
         +MVKQQY+SLEDLR++SEIR+F+D QRGCV++ K+ R
Subjt:  IRMVKQQYISLEDLREFSEIRIFRDHQRGCVSIRKKPR

Sequences

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CDS sequence

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ATGCCGGGGCTGGGCGTTTTCGGGCTCGGGAGGTGCTTCGACGGGTGCGTCGAGCACGGTGGAGCGTCGGGGTTGGGGACGAGAATATGGAATATGAGCGACAGGGCGGT
CGAGGTGCAGATAAGGGTAGGATCAATATTGAAAAAGGTGCATAGTTTGAAGCCAGGATGCTCAAAGAGGTTGAAATGCAAGAGCATTTACAAAGCATACATGCCGGGAA
CAGGGAGGAGTATGAAGAGCTTGCTTTATTACTACGATCAAGCTTCTCAACCTTATGTTTGGATACATGAAACCGGGGGTGATTCCATCAGAATGGTGAAGCAGCAGTAC
ATTAGTCTTGAGGATCTAAGGGAGTTTTCCGAGATCAGAATCTTTCGAGATCATCAGCGTGGCTGCGTATCCATTCGCAAGAAACCGAGGCCCGATTTTTGC

mRNA sequence

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Protein sequence

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MPGLGVFGLGRCFDGCVEHGGASGLGTRIWNMSDRAVEVQIRVGSILKKVHSLKPGCSKRLKCKSIYKAYMPGTGRSMKSLLYYYDQASQPYVWIHETGGDSIRMVKQQY
ISLEDLREFSEIRIFRDHQRGCVSIRKKPRPDFC

MS006030 (gene) of Bitter gourd (TR) v1 genome