CuGenDBv2

Gene ID	MS006068
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	F-box-like domain-containing protein
Genome location	scaffold254:3541444..3543487
RNA-Seq Expression	MS006068
Synteny	MS006068
Gene Ontology terms	GO:0000209 - protein polyubiquitination (biological process) GO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process) GO:0019005 - SCF ubiquitin ligase complex (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001810 - F-box domain IPR036047 - F-box-like domain superfamily IPR039588 - F-box only protein 4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438803.1 PREDICTED: uncharacterized protein LOC103483796 [Cucumis melo]

1.8e-106

76.33

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Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGF HLP D ALKIASSLQ S+IC+L CCSRFC ++CD D LWESLARERWPYIN     GSSSSTLA+ PIS GW++FYI++HIEI G+A+AAVKF+EQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIE GDY R I GLWDLKLSFVD QMVLFKPQLNELLNLVGLHYC+ WLQVPANQ++EAL   KI+E+H+ VKWWKLGRWFYGFRMRDE QT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
        SLAEL+  EGED+LGVLSRGAVHEVLRVQ++ GD F  HWS+Q T
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT

XP_022137971.1 uncharacterized protein LOC111009254 isoform X1 [Momordica charantia]

1.2e-137

98.78

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Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT

XP_022137972.1 uncharacterized protein LOC111009254 isoform X2 [Momordica charantia]

5.0e-128

98.71

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA

XP_022137975.1 uncharacterized protein LOC111009254 isoform X3 [Momordica charantia]

5.0e-128

98.71

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA

XP_038893805.1 uncharacterized protein LOC120082593 [Benincasa hispida]

1.7e-107

78.42

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Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MG  HLPID ALKIASSLQASDIC+L CCSRFC ++CD D LWESLARERWPYIN     GSS STLA+ PIS GW++ YI++HIEI G+A+AAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIE GDY R I GLWDLKLSF+D QMVLFKPQLNELLNLVGLHYC+NWLQVPANQVMEAL   K++E+++ VKWWKLGRWFYGFRMRDE QT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWS
        SLAEL+  EGED+LGVLSRGAVHEVLRVQ++AGDPF SHWS
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AXY1 uncharacterized protein LOC103483796

8.9e-107

76.33

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGF HLP D ALKIASSLQ S+IC+L CCSRFC ++CD D LWESLARERWPYIN     GSSSSTLA+ PIS GW++FYI++HIEI G+A+AAVKF+EQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIE GDY R I GLWDLKLSFVD QMVLFKPQLNELLNLVGLHYC+ WLQVPANQ++EAL   KI+E+H+ VKWWKLGRWFYGFRMRDE QT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
        SLAEL+  EGED+LGVLSRGAVHEVLRVQ++ GD F  HWS+Q T
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT

A0A5A7U795 F-box-like domain-containing protein

8.9e-107

76.33

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGF HLP D ALKIASSLQ S+IC+L CCSRFC ++CD D LWESLARERWPYIN     GSSSSTLA+ PIS GW++FYI++HIEI G+A+AAVKF+EQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIE GDY R I GLWDLKLSFVD QMVLFKPQLNELLNLVGLHYC+ WLQVPANQ++EAL   KI+E+H+ VKWWKLGRWFYGFRMRDE QT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
        SLAEL+  EGED+LGVLSRGAVHEVLRVQ++ GD F  HWS+Q T
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT

A0A6J1C8B1 uncharacterized protein LOC111009254 isoform X1

5.7e-138

98.78

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCSHWSQQGT

A0A6J1C8B4 uncharacterized protein LOC111009254 isoform X3

2.4e-128

98.71

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA

A0A6J1CBT0 uncharacterized protein LOC111009254 isoform X2

2.4e-128

98.71

Show/hide

Query:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
        MGFLHLPIDVALKIASSLQASDICALACCSR C EICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ
Subjt:  MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQ

Query:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV
        CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQT RV
Subjt:  CSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRV

Query:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
        SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA
Subjt:  SLAELIAAEGEDILGVLSRGAVHEVLRVQIAA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G15563.1 unknown protein

5.7e-29

40.38

Show/hide

Query:  KHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKL
        +H E++ +A   +K++ +   +  +EAG Y  A+  +  ++  F DV++  FKP L+ LLNL+GL YC   L+    QV++ L    ISE+ V+VKW  L
Subjt:  KHIEISGKAKAAVKFIEQCSPSTPIEAGDYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKL

Query:  GRWFYGFRMRDEHQTCRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCS
        GRW  G RMRD+  + +VSL +++  + E +L VL RG VHEVLRV I+  D  C+
Subjt:  GRWFYGFRMRDEHQTCRVSLAELIAAEGEDILGVLSRGAVHEVLRVQIAAGDPFCS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGGGTTTCTCCATCTTCCCATTGACGTTGCCCTGAAAATTGCTTCTTCCCTCCAGGCATCGGACATTTGTGCTTTGGCCTGTTGCTCGCGGTTTTGTTGGGAAATCTG
CGATCTCGATTGTCTGTGGGAATCTCTCGCGAGAGAGAGATGGCCGTATATCAATGCTTCTTCGTCTTCTGGTTCGTCTTCATCAACTCTCGCGAAGCCTCCCATCTCCA
CGGGATGGAGAAACTTTTACATCCGGAAGCATATTGAGATATCAGGAAAAGCTAAAGCAGCTGTCAAGTTTATAGAACAATGTTCTCCTTCGACCCCGATCGAGGCTGGA
GACTATCATAGAGCAATTGCAGGCTTGTGGGATTTGAAGCTCAGTTTTGTAGATGTTCAAATGGTGCTTTTCAAACCCCAGCTTAATGAGCTGCTGAACTTGGTTGGCTT
ACACTACTGTAAAAATTGGCTTCAAGTCCCTGCAAATCAAGTCATGGAAGCACTTCTAAGTCACAAGATTTCAGAGAAGCATGTATATGTGAAATGGTGGAAGCTGGGAA
GATGGTTTTATGGCTTCCGCATGAGAGACGAACATCAGACTTGTCGAGTCTCTCTGGCCGAACTTATAGCCGCAGAAGGGGAGGATATTCTCGGGGTGCTTAGCCGAGGT
GCTGTTCACGAGGTACTCCGGGTTCAGATTGCTGCAGGTGATCCCTTTTGCAGTCACTGGTCTCAACAAGGCACA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGFLHLPIDVALKIASSLQASDICALACCSRFCWEICDLDCLWESLARERWPYINASSSSGSSSSTLAKPPISTGWRNFYIRKHIEISGKAKAAVKFIEQCSPSTPIEAG
DYHRAIAGLWDLKLSFVDVQMVLFKPQLNELLNLVGLHYCKNWLQVPANQVMEALLSHKISEKHVYVKWWKLGRWFYGFRMRDEHQTCRVSLAELIAAEGEDILGVLSRG
AVHEVLRVQIAAGDPFCSHWSQQGT

MS006068 (gene) of Bitter gourd (TR) v1 genome