CuGenDBv2

Gene ID	MS006087
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	nucleolar protein 58
Genome location	scaffold254:3704938..3705773
RNA-Seq Expression	MS006087
Synteny	MS006087
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004134201.1 uncharacterized protein LOC101221899 isoform X2 [Cucumis sativus]

5.1e-47

66.29

Show/hide

Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
         SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK                           IVEDSECG+  +PK
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

XP_008438870.1 PREDICTED: uncharacterized protein LOC103483832 [Cucumis melo]

1.2e-48

67.82

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Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKLHQDP+ FSSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP
         SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK                           IVEDSECG+ K P
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP

XP_022138293.1 uncharacterized protein LOC111009505 [Momordica charantia]

7.6e-67

84.21

Show/hide

Query:  MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD
        MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD
Subjt:  MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD

Query:  EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
        EGGAMNSDPKKQKKKDKKKKKKNNKNKRQK                           IVEDSECGIAKRPK
Subjt:  EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

XP_022956118.1 uncharacterized protein LOC111457905 isoform X1 [Cucurbita moschata]

7.4e-46

64.25

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Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNN----KNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
         SFD+G AMNS+PKKQK K+KK KK  N    KNKRQK                          +IVEDS CG+ KRPK
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNN----KNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

XP_031739377.1 uncharacterized protein LOC101221899 isoform X1 [Cucumis sativus]

4.7e-48

66.67

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Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP
         SFDEG +MNS+PKKQKKK+KKKK KN KNKRQKVE PL    Y L   +        +   VE + C + + P
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LAK0 Uncharacterized protein

2.5e-47

66.29

Show/hide

Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKL+QDP+  SSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
         SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK                           IVEDSECG+  +PK
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

A0A1S3AY37 uncharacterized protein LOC103483832

5.9e-49

67.82

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Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDL+EEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFLHRKLHQDP+ FSSI+P ILDLAVRNAKA++ SSGT+ IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP
         SFDEG +MNS+PKKQKKK+KKKK KN KNKRQK                           IVEDSECG+ K P
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRP

A0A6J1CCM9 uncharacterized protein LOC111009505

3.7e-67

84.21

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Query:  MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD
        MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD
Subjt:  MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFD

Query:  EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
        EGGAMNSDPKKQKKKDKKKKKKNNKNKRQK                           IVEDSECGIAKRPK
Subjt:  EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

A0A6J1GVW4 uncharacterized protein LOC111457905 isoform X1

3.6e-46

64.25

Show/hide

Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDKKKKKKNN----KNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
         SFD+G AMNS+PKKQK K+KK KK  N    KNKRQK                          +IVEDS CG+ KRPK
Subjt:  GSFDEGGAMNSDPKKQKKKDKKKKKKNN----KNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

A0A6J1IUT6 uncharacterized protein LOC111479494

6.1e-46

64.97

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Query:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE
        MEDLSEEERRALRGSKFAPLP     SRS  RL HPGGP+KTNKAAALAKFL RKLHQDP+G SSI+P IL+LAVRNAKA++LSS  + IRHVDTFDDPE
Subjt:  MEDLSEEERRALRGSKFAPLP----PSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPE

Query:  GSFDEGGAMNSDPKKQKKKDK--KKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK
         SFD+G AMNS+PKKQK K+K  KK KK  KNKRQK                           IVEDS CG+ KRPK
Subjt:  GSFDEGGAMNSDPKKQKKKDK--KKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G18540.1 unknown protein

1.8e-29

58.33

Show/hide

Query:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF
        E+L+E+E+RALRGSKFAPL   PS S S   RL HPGGP+KTNKAAALAKFL RKL QDP+G +SIDP +++LAV+NAK T++SSG S+    I+HV +F
Subjt:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF

Query:  DDPEGSFD----EGGAMNSDPKK---QKKKDKKKKKKNNKNKRQ
        +D E S D    E   +N   KK   +KKK++KKKKKN K+K+Q
Subjt:  DDPEGSFD----EGGAMNSDPKK---QKKKDKKKKKKNNKNKRQ

AT5G18540.2 unknown protein

3.0e-29

56.64

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Query:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF
        E+L+E+E+RALRGSKFAPL   PS S S   RL HPGGP+KTNKAAALAKFL RKL QDP+G +SIDP +++LAV+NAK T++SSG S+    I+HV +F
Subjt:  EDLSEEERRALRGSKFAPLP--PSRSLS---RLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTST----IRHVDTF

Query:  DDPEGSFD----EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKV
        +D E S D    E   +N   KK+  K KK++KK  KNK+ K+
Subjt:  DDPEGSFD----EGGAMNSDPKKQKKKDKKKKKKNNKNKRQKV

Sequences

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CDS sequence

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ATGGAGGATCTGAGCGAAGAAGAGAGGCGCGCCTTACGCGGCAGCAAGTTCGCGCCCCTGCCGCCCTCTCGCTCCCTCTCAAGGCTGCCTCACCCTGGTGGCCCTATCAA
GACCAACAAGGCTGCGGCTCTTGCCAAGTTTCTCCACAGAAAACTCCACCAAGACCCCCATGGTTTCTCCTCCATCGATCCCAACATTCTCGACCTCGCCGTTCGTAATG
CCAAAGCCACTCTTCTTTCCAGTGGCACTTCAACCATTCGCCATGTGGACACATTTGATGACCCTGAGGGCTCTTTCGACGAAGGGGGTGCCATGAATTCTGACCCTAAA
AAGCAAAAGAAGAAAGACAAAAAGAAGAAGAAGAAGAATAATAAGAATAAAAGGCAAAAGGTTGAAAATCCCCTCTCATGGTTTTGTTATAAGCTCTATGATTTTAGTGG
GTTTCTTGACAAATCTGTTGTTGTTCTGCAGATTGTGGAGGACTCCGAGTGTGGCATTGCAAAAAGGCCCAAA

mRNA sequence

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Protein sequence

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MEDLSEEERRALRGSKFAPLPPSRSLSRLPHPGGPIKTNKAAALAKFLHRKLHQDPHGFSSIDPNILDLAVRNAKATLLSSGTSTIRHVDTFDDPEGSFDEGGAMNSDPK
KQKKKDKKKKKKNNKNKRQKVENPLSWFCYKLYDFSGFLDKSVVVLQIVEDSECGIAKRPK

MS006087 (gene) of Bitter gourd (TR) v1 genome