; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006110 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006110
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold96:125109..127784
RNA-Seq ExpressionMS006110
SyntenyMS006110
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584016.1 hypothetical protein SDJN03_19948, partial [Cucurbita argyrosperma subsp. sororia]3.9e-7590.73Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+GFAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH+TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

XP_022139852.1 uncharacterized protein LOC111010664 [Momordica charantia]5.7e-8299.34Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQV FAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

XP_022927571.1 uncharacterized protein LOC111434363 [Cucurbita moschata]5.7e-7490.07Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+GFAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPV CPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

XP_023001755.1 uncharacterized protein LOC111495798 [Cucurbita maxima]6.7e-7590.73Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+GFAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

XP_023519551.1 uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo]5.7e-7490.07Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSHT  R+HLDPEAQ+GFAGKLGH SPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  S+ATTSSH TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

TrEMBL top hitse value%identityAlignment
A0A1S3B529 uncharacterized protein LOC1034860981.2e-7288Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSPIGAPLD+ +EDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH  GR+HLDPEAQ+GF GKL HPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSS
        VLMPGDHIPTYIAHPAPVPC PERIPWPQHQHN  SY T SSHLTE+SSS
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSS

A0A5D3DRS2 Uncharacterized protein1.2e-7288Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSPIGAPLD+ +EDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH  GR+HLDPEAQ+GF GKL HPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSS
        VLMPGDHIPTYIAHPAPVPC PERIPWPQHQHN  SY T SSHLTE+SSS
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSS

A0A6J1CF31 uncharacterized protein LOC1110106642.7e-8299.34Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQV FAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

A0A6J1EI19 uncharacterized protein LOC1114343632.8e-7490.07Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+GFAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPV CPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

A0A6J1KM25 uncharacterized protein LOC1114957983.3e-7590.73Show/hide
Query:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS
        MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSMFL+MAIFERFLRP PTAFSH   R+HLDPEAQ+GFAGKLGHPSPKMTVYSCGVS
Subjt:  MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVS

Query:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL
        VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH TENSSSL
Subjt:  VLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G09812.1 unknown protein6.2e-1844.72Show/hide
Query:  WSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFS--HTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPG
        WS I +P +   E  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H   +   D  +Q           P  TV    VSV+MPG
Subjt:  WSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFS--HTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPG

Query:  DHIPTYIAHPAPVPCPPERIPWP
        + +P++IA PAP+PC  E I WP
Subjt:  DHIPTYIAHPAPVPCPPERIPWP

AT1G11120.1 unknown protein8.6e-3649.14Show/hide
Query:  DYGWSPIGAPLDLHREDHWR-HFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHT-AGRSHLDP--EAQVGFAG---KLGHPSPK------
        ++ W PIGAP++L RE+ W+  FD+SV+AVSFGFVATAIL+SMFLVMAIFER +R   T+ +++ +  S + P  +++VGF G   KLG+ SPK      
Subjt:  DYGWSPIGAPLDLHREDHWR-HFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHT-AGRSHLDP--EAQVGFAG---KLGHPSPK------

Query:  --------------------MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTE
                            MTVYS GVSVLMPGD IPT+IAHPAPVPCPP+ I   QHQH ++  +++S+ + E
Subjt:  --------------------MTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTE

AT1G11120.2 unknown protein4.4e-4057.72Show/hide
Query:  DYGWSPIGAPLDLHREDHWR-HFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHT-AGRSHLDP--EAQVGFAG---KLGHPSPKMTVYSC
        ++ W PIGAP++L RE+ W+  FD+SV+AVSFGFVATAIL+SMFLVMAIFER +R   T+ +++ +  S + P  +++VGF G   KLG+ SPKMTVYS 
Subjt:  DYGWSPIGAPLDLHREDHWR-HFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHT-AGRSHLDP--EAQVGFAG---KLGHPSPKMTVYSC

Query:  GVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTE
        GVSVLMPGD IPT+IAHPAPVPCPP+ I   QHQH ++  +++S+ + E
Subjt:  GVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTE

AT1G58007.1 unknown protein3.7e-1543.69Show/hide
Query:  NSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S  +    +D  +Q     KL   +  + V +  VSV+MPGD +P+Y+A PAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH

AT1G58007.2 unknown protein3.7e-1543.69Show/hide
Query:  NSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW
        +S++A+SFGFVATAIL+ MF++MAI E   R      S  +    +D  +Q     KL   +  + V +  VSV+MPGD +P+Y+A PAP PC  E I W
Subjt:  NSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPW

Query:  PQH
        P H
Subjt:  PQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGAAGAAGACTATGGATGGTCCCCAATTGGGGCTCCTCTAGACCTGCACAGAGAGGACCACTGGAGGCATTTCGACAACTCAGTCGACGCCGTCTCTTTTGGGTT
TGTTGCTACCGCCATTCTCGTCTCTATGTTCTTGGTAATGGCCATTTTCGAAAGGTTTTTGCGACCTGCTCCCACGGCTTTCTCTCACACCGCTGGCCGGAGCCACCTTG
ACCCCGAGGCGCAGGTGGGATTTGCGGGGAAGCTTGGCCATCCCTCGCCTAAAATGACTGTTTATTCCTGTGGAGTTTCAGTGCTGATGCCAGGAGATCATATACCTACG
TACATCGCCCACCCGGCTCCTGTTCCCTGTCCTCCCGAACGCATTCCATGGCCACAGCATCAACACAACACCACATCCTATGCCACCACCAGTTCCCATCTCACTGAAAA
CTCAAGTTCCCTA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGAAGAAGACTATGGATGGTCCCCAATTGGGGCTCCTCTAGACCTGCACAGAGAGGACCACTGGAGGCATTTCGACAACTCAGTCGACGCCGTCTCTTTTGGGTT
TGTTGCTACCGCCATTCTCGTCTCTATGTTCTTGGTAATGGCCATTTTCGAAAGGTTTTTGCGACCTGCTCCCACGGCTTTCTCTCACACCGCTGGCCGGAGCCACCTTG
ACCCCGAGGCGCAGGTGGGATTTGCGGGGAAGCTTGGCCATCCCTCGCCTAAAATGACTGTTTATTCCTGTGGAGTTTCAGTGCTGATGCCAGGAGATCATATACCTACG
TACATCGCCCACCCGGCTCCTGTTCCCTGTCCTCCCGAACGCATTCCATGGCCACAGCATCAACACAACACCACATCCTATGCCACCACCAGTTCCCATCTCACTGAAAA
CTCAAGTTCCCTA
Protein sequenceShow/hide protein sequence
MGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSMFLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPT
YIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL