; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006135 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006135
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionYABBY protein
Genome locationscaffold96:396667..398050
RNA-Seq ExpressionMS006135
SyntenyMS006135
Gene Ontology termsGO:0009944 - polarity specification of adaxial/abaxial axis (biological process)
GO:0010154 - fruit development (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:1902183 - regulation of shoot apical meristem development (biological process)
GO:2000024 - regulation of leaf development (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006780 - YABBY protein
IPR036910 - High mobility group box domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156472.1 axial regulator YABBY 5-like [Momordica charantia]5.0e-9699.44Show/hide
Query:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN
        SSSSPTPPPCHPL PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN
Subjt:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN

Query:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

XP_022957809.1 axial regulator YABBY 5-like [Cucurbita moschata]9.4e-7987.85Show/hide
Query:  SSSSPTPPPCHPL--PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILE
        SSSSPT               LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILE
Subjt:  SSSSPTPPPCHPL--PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILE

Query:  NIPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        NIPTPNSN+LINQFAATN FGMPSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  NIPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

XP_022995783.1 axial regulator YABBY 1-like [Cucurbita maxima]4.2e-7988.83Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENI
        SSSSPT             LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILENI
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENI

Query:  PTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        PTPNSN+LINQFAATN FGMPSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  PTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

XP_023532966.1 protein YABBY 4-like [Cucurbita pepo subsp. pepo]7.2e-7988.33Show/hide
Query:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN
        SSSSPT              LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILEN
Subjt:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN

Query:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        IPTPNSN+LINQFAATN FGMPSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

XP_038906988.1 axial regulator YABBY 5-like [Benincasa hispida]1.9e-7993.79Show/hide
Query:  LDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQF-AATNNF
        LDHHLP+ EQLCYVHCNICDTVLAVSVPC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILEN+ TPNSN+LINQF A TNNF
Subjt:  LDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQF-AATNNF

Query:  GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

TrEMBL top hitse value%identityAlignment
A0A0A0KKT0 Axial regulator YABBY11.7e-7892.59Show/hide
Query:  LDHHLPAA-EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQF-AATNN
        LDHHLP++ EQLCYVHCNICDTVLAVSVPC SLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILEN+ TPNSN+LINQF A TNN
Subjt:  LDHHLPAA-EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQF-AATNN

Query:  FGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        FGMPSRGVTDELPRPPV+NRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  FGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

A0A6J1DS48 axial regulator YABBY 5-like2.4e-9699.44Show/hide
Query:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN
        SSSSPTPPPCHPL PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN
Subjt:  SSSSPTPPPCHPL-PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILEN

Query:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  IPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

A0A6J1H326 axial regulator YABBY 5-like4.6e-7987.85Show/hide
Query:  SSSSPTPPPCHPL--PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILE
        SSSSPT               LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILE
Subjt:  SSSSPTPPPCHPL--PPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILE

Query:  NIPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        NIPTPNSN+LINQFAATN FGMPSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  NIPTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

A0A6J1I282 axial regulator YABBY 5-like9.5e-7791.93Show/hide
Query:  LDHHLP-AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQFAATNNF
        LDHHLP AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFH LGH      SHNILENIPTPN N+LINQFAATNNF
Subjt:  LDHHLP-AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLINQFAATNNF

Query:  GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        G PSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

A0A6J1K906 axial regulator YABBY 1-like2.0e-7988.83Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENI
        SSSSPT             LDHHLP+ EQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS NQFHQLGHSFFSP SHNILENI
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENI

Query:  PTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        PTPNSN+LINQFAATN FGMPSRGV DELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
Subjt:  PTPNSNFLINQFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

SwissProt top hitse value%identityAlignment
A2X7Q3 Protein YABBY 41.1e-4253.62Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS-----TNQFHQLGHSFFSPSS-H
        SSSS    P   L  P P         EQLCYVHCN CDT+LAV VPCSSLFKTVTVRCGHC NLL VN+RGLLLP+      NQ H  G S  SP+S H
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS-----TNQFHQLGHSFFSPSS-H

Query:  NILENIPTPNSNFLINQFAATNNFGMPSRGVTD--------------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA
         +L+ +     + L+ Q A+ +   +  R  +                     ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISHREA
Subjt:  NILENIPTPNSNFLINQFAATNNFGMPSRGVTD--------------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA

Query:  FSAAAKN
        FSAAAKN
Subjt:  FSAAAKN

O22152 Axial regulator YABBY 11.1e-4256.76Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFH-QLG-HSFFSPSSHNILE
        S SSP+   C P        DH  P ++ LCYV CN C T+LAV+VP +SLFKTVTVRCG CTNLL VNMR  +LP++NQ   QLG HS+F+P   +ILE
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFH-QLG-HSFFSPSSHNILE

Query:  NIPTPNSN---FLINQFAATNNF-GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
         +    SN    ++NQ    N+           E+P+ P +NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKN
Subjt:  NIPTPNSN---FLINQFAATNNF-GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

Q01JG2 Protein YABBY 53.6e-4152.55Show/hide
Query:  HPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLP---STNQFHQLGHSFFSPSS-HNILENIP-----
        H    PPP     L   EQLCYVHCN CDT+LAV VPCSSLFKTVTVRCGHC NLL VN+RGLLLP   ST      G +  SP+S H +L+ +P     
Subjt:  HPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLP---STNQFHQLGHSFFSPSS-HNILENIP-----

Query:  ---------------TPNSNFLINQFAATNNFGMPSRGVTDELPRP---PVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
                       T +++   N   AT+     ++    E  +P   P  NR  EKRQRVPSAYNRFIKDEIQRIK+ NPDI+HREAFSAAAKN
Subjt:  ---------------TPNSNFLINQFAATNNFGMPSRGVTDELPRP---PVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

Q6H668 Protein YABBY 41.1e-4253.62Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS-----TNQFHQLGHSFFSPSS-H
        SSSS    P   L  P P         EQLCYVHCN CDT+LAV VPCSSLFKTVTVRCGHC NLL VN+RGLLLP+      NQ H  G S  SP+S H
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPS-----TNQFHQLGHSFFSPSS-H

Query:  NILENIPTPNSNFLINQFAATNNFGMPSRGVTD--------------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA
         +L+ +     + L+ Q A+ +   +  R  +                     ELP+  P   NRPPEKRQRVPSAYNRFIKDEIQRIK+ NPDISHREA
Subjt:  NILENIPTPNSNFLINQFAATNNFGMPSRGVTD--------------------ELPR--PPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREA

Query:  FSAAAKN
        FSAAAKN
Subjt:  FSAAAKN

Q9XFB1 Axial regulator YABBY 38.6e-4354.55Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSH
        SSS+P  PP             H  + +QLCYVHC+ CDTVLAVSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS +    LGHSF      P   
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSH

Query:  NILENIPTPNSNFLINQFAA--------TNNFGMPSRG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        N+LE + +   N  +N   +          +  M +R         E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKN
Subjt:  NILENIPTPNSNFLINQFAA--------TNNFGMPSRG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

Arabidopsis top hitse value%identityAlignment
AT2G26580.1 plant-specific transcription factor YABBY family protein6.2e-3650.31Show/hide
Query:  AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPN---SNFLINQFAAT--NNFGM
        A EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCGHCTNL  VNM                          L+++  PN   +N+ + ++ ++  ++  +
Subjt:  AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPN---SNFLINQFAAT--NNFGM

Query:  PSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        PSR  T  +    ++NRPPEKRQRVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKN
Subjt:  PSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

AT2G26580.2 plant-specific transcription factor YABBY family protein6.2e-3650.31Show/hide
Query:  AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPN---SNFLINQFAAT--NNFGM
        A EQLCY+ CN C+ +LAV+VPCSSLF  VTVRCGHCTNL  VNM                          L+++  PN   +N+ + ++ ++  ++  +
Subjt:  AAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPN---SNFLINQFAAT--NNFGM

Query:  PSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        PSR  T  +    ++NRPPEKRQRVPSAYN+FIK+EIQRIK+ NPDISHREAFS AAKN
Subjt:  PSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

AT2G45190.1 Plant-specific transcription factor YABBY family protein8.0e-4456.76Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFH-QLG-HSFFSPSSHNILE
        S SSP+   C P        DH  P ++ LCYV CN C T+LAV+VP +SLFKTVTVRCG CTNLL VNMR  +LP++NQ   QLG HS+F+P   +ILE
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFH-QLG-HSFFSPSSHNILE

Query:  NIPTPNSN---FLINQFAATNNF-GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
         +    SN    ++NQ    N+           E+P+ P +NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKN
Subjt:  NIPTPNSN---FLINQFAATNNF-GMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

AT4G00180.1 Plant-specific transcription factor YABBY family protein6.1e-4454.55Show/hide
Query:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSH
        SSS+P  PP             H  + +QLCYVHC+ CDTVLAVSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS +    LGHSF      P   
Subjt:  SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSH

Query:  NILENIPTPNSNFLINQFAA--------TNNFGMPSRG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        N+LE + +   N  +N   +          +  M +R         E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKN
Subjt:  NILENIPTPNSNFLINQFAA--------TNNFGMPSRG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN

AT4G00180.2 Plant-specific transcription factor YABBY family protein1.8e-3555.56Show/hide
Query:  ICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSHNILENIPTPNSNFLINQFAA--------TNNFGMPS
        +CD    VSVP SSLFKTVTVRCGHC+NLL   V+MR LLLPS +    LGHSF      P   N+LE + +   N  +N   +          +  M +
Subjt:  ICDTVLAVSVPCSSLFKTVTVRCGHCTNLL--PVNMRGLLLPSTNQFHQLGHSFF----SPSSHNILENIPTPNSNFLINQFAA--------TNNFGMPS

Query:  RG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN
        R         E+PRPP  NRPPEKRQRVPSAYNRFIK+EIQRIK+ NPDISHREAFSAAAKN
Subjt:  RG-----VTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTCTTCTTCTCCAACTCCTCCACCCTGTCATCCTCTACCGCCGCCGCCGCCGCCGCTGGACCACCACCTCCCCGCCGCCGAGCAGCTCTGCTATGTCCATTGCAATAT
TTGCGACACTGTCCTTGCGGTGAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTTACTGTCCGATGTGGGCACTGCACCAATCTGCTGCCTGTCAACATGCGTGGCCTGC
TTCTGCCTTCTACTAATCAGTTTCATCAGCTTGGCCACTCTTTTTTCTCTCCTTCTTCTCACAACATTCTGGAGAATATCCCCACCCCGAATTCGAATTTCCTCATCAAC
CAGTTTGCAGCTACTAACAATTTTGGAATGCCATCTCGTGGAGTCACTGATGAGCTCCCAAGGCCCCCAGTCATCAACAGACCTCCGGAGAAGAGACAGAGAGTGCCCTC
TGCTTACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGTGAATCCCGATATATCCCACAGAGAAGCCTTCAGCGCCGCGGCTAAGAATGTAAATTTAAAAC
CCACC
mRNA sequenceShow/hide mRNA sequence
TCTTCTTCTTCTCCAACTCCTCCACCCTGTCATCCTCTACCGCCGCCGCCGCCGCCGCTGGACCACCACCTCCCCGCCGCCGAGCAGCTCTGCTATGTCCATTGCAATAT
TTGCGACACTGTCCTTGCGGTGAGTGTTCCTTGTTCTAGCTTGTTCAAAACTGTTACTGTCCGATGTGGGCACTGCACCAATCTGCTGCCTGTCAACATGCGTGGCCTGC
TTCTGCCTTCTACTAATCAGTTTCATCAGCTTGGCCACTCTTTTTTCTCTCCTTCTTCTCACAACATTCTGGAGAATATCCCCACCCCGAATTCGAATTTCCTCATCAAC
CAGTTTGCAGCTACTAACAATTTTGGAATGCCATCTCGTGGAGTCACTGATGAGCTCCCAAGGCCCCCAGTCATCAACAGACCTCCGGAGAAGAGACAGAGAGTGCCCTC
TGCTTACAACCGCTTCATCAAGGACGAGATCCAACGCATCAAGTCTGTGAATCCCGATATATCCCACAGAGAAGCCTTCAGCGCCGCGGCTAAGAATGTAAATTTAAAAC
CCACC
Protein sequenceShow/hide protein sequence
SSSSPTPPPCHPLPPPPPPLDHHLPAAEQLCYVHCNICDTVLAVSVPCSSLFKTVTVRCGHCTNLLPVNMRGLLLPSTNQFHQLGHSFFSPSSHNILENIPTPNSNFLIN
QFAATNNFGMPSRGVTDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNVNLKPT