; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006137 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006137
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSET domain
Genome locationscaffold96:410520..411293
RNA-Seq ExpressionMS006137
SyntenyMS006137
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016908.1 hypothetical protein SDJN02_22019, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-7566.53Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST E SMEVQ QKI+ALLDFVMEC RNHRL SR++EPEN  VS+MKDAVLDSA+I+D+LTVLS +ED  EI NVPKEHV   D LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        +RSFPPGCGRGAP VR QHGSK L+N+ SR + R W   A TK AKKL+AAS+SGAN        P+T R  SEDH +LED  RK T NED +I G+F R
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR
        +FD  KS+ G L ATGPE ME RVVVQ L AAP+CPWRQSKR  KS   ++
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR

XP_022156471.1 uncharacterized protein LOC111023359 [Momordica charantia]1.3e-13999.22Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR
        MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR

Query:  SFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD
        SFPPGCG GAPRVRTQHGSKCLQNNSSRTKKR WYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD
Subjt:  SFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD

Query:  DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL
        DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL
Subjt:  DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL

XP_022922208.1 uncharacterized protein LOC111430264 [Cucurbita moschata]1.3e-7365.74Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST E SMEVQ QKI+ALLDFVMEC RNHRL S ++EPEN  VS+MKDAVLDSA+I+D+LTVLS +ED  EI NVPKEHV   D LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        +RSFPPGCGRGAP VR QHGSK L+N+ SR + R W   A TK AKKL+AAS+SGAN        PIT R  SEDH +LED  RK   NED +I G+  R
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR
        +FD  KS+ G L ATGPE ME RVVVQ L AAP+CPWRQSKR  KS   ++
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR

XP_023550719.1 uncharacterized protein LOC111808780 [Cucurbita pepo subsp. pepo]1.2e-7164.94Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST E SMEVQ QKI+ALLDFVMEC RNHRL S ++EPEN  VS+MKDAVLDSA+I+D+LTVLS +ED  E  NVPKEHV   D LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        +RSFPPGCGRGAP VR QHGSK L+N+ SR + R W   A TK AKK +AAS+S A         PIT R  SEDH +LED  RK   NED +I GKF R
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR
        +FD  KS+ G L ATGPE ME RVVVQ L AAP+CPWRQSKR  KS   ++
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR

XP_038875989.1 uncharacterized protein LOC120068330 [Benincasa hispida]1.6e-7164.06Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST E SMEVQ Q I+ALL F+MEC RNHRL SR++EPEN FVS+MKDAVLDSA+IVD+LTVLS +ED  EIVNVPKEHV   D+LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYG-ASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        IRSFPPGCGRGAP V  +HGSKCLQ N SR KKR     A TKVA+K +  S+S A        SPIT R  S D+N+LED  RK + NED + G KFSR
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYG-ASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGE
         FD+ KS+ G  +AT PE + KRVVVQ LTA+PNCPWRQ K+  KS  T    EG+
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGE

TrEMBL top hitse value%identityAlignment
A0A1Q3CI33 SET domain-containing protein/YDG_SRA domain-containing protein/Pre-SET domain-containing protein (Fragment)3.9e-0428.49Show/hide
Query:  PKEHVVLVDSLPKFHPPRKGFSAIRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNL
        PKE         + +PPR+  SAIR FPP CGR APR   +  ++ L +  + +  +      T +    +      A   K W      SR + +D+  
Subjt:  PKEHVVLVDSLPKFHPPRKGFSAIRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNL

Query:  L-----------EDTTRKA--TGNEDINIGGKFSRQFDDEKSEGGILVATGPES----------MEKRVVVQALTAAPNCPWRQSK
                    EDT   +  TGN D+ +  + SR+     +E G     G ++          +  RV+VQ L AA  CPWRQSK
Subjt:  L-----------EDTTRKA--TGNEDINIGGKFSRQFDDEKSEGGILVATGPES----------MEKRVVVQALTAAPNCPWRQSK

A0A1S3ASX0 uncharacterized protein LOC1034826423.0e-6060.16Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST   SMEVQ QKI+ALL  +M C RN RL SR++EPEN   S+MKDAVLDSA++VD LTVLS +ED  EIVNVPKEHV   D+LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGAS-TKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        IRSFPPGCGRGAP +  ++ SK LQ + SR KKR W     TKVAKK +A S SGA          IT R   EDHN+ ED  R+ + +ED +IG + SR
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGAS-TKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKS
         FD+ KS+ G L A  PES+ KRVVVQ LTA+ NCPWRQ K++ KS
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKS

A0A200QLE2 SET domain5.1e-0424.9Show/hide
Query:  VDTLTVLSTNEDEIVNVPKEHVVL---VDSLPKFHPPRKGFSAIRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKL----------
        + T+ V+ T+   + +VP+E  +L   V S+ K +PPR+  SA R FPPGCGR APR+  +   K      +++ K   +G   +  +++          
Subjt:  VDTLTVLSTNEDEIVNVPKEHVVL---VDSLPKFHPPRKGFSAIRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKL----------

Query:  ----------------------NAASYSGANPCKS---WLQSPITSRTESEDHNLLEDTTR----------------------------KATGNE--DIN
                              N    S  +  K+     Q    S ++ E  +  E+TTR                            +  G E   IN
Subjt:  ----------------------NAASYSGANPCKS---WLQSPITSRTESEDHNLLEDTTR----------------------------KATGNE--DIN

Query:  IGGKFSRQFD---------DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSK
            F R+             +S G + +  GP +  +R++VQAL AAPNCPWRQ+K
Subjt:  IGGKFSRQFD---------DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSK

A0A6J1DV21 uncharacterized protein LOC1110233596.4e-14099.22Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR
        MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIR

Query:  SFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD
        SFPPGCG GAPRVRTQHGSKCLQNNSSRTKKR WYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD
Subjt:  SFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFD

Query:  DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL
        DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL
Subjt:  DEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL

A0A6J1E5Y5 uncharacterized protein LOC1114302646.1e-7465.74Show/hide
Query:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA
        MESST E SMEVQ QKI+ALLDFVMEC RNHRL S ++EPEN  VS+MKDAVLDSA+I+D+LTVLS +ED  EI NVPKEHV   D LPKFHPPRKG SA
Subjt:  MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNED--EIVNVPKEHVVLVDSLPKFHPPRKGFSA

Query:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR
        +RSFPPGCGRGAP VR QHGSK L+N+ SR + R W   A TK AKKL+AAS+SGAN        PIT R  SEDH +LED  RK   NED +I G+  R
Subjt:  IRSFPPGCGRGAPRVRTQHGSKCLQNNSSRTKKRPW-YGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSR

Query:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR
        +FD  KS+ G L ATGPE ME RVVVQ L AAP+CPWRQSKR  KS   ++
Subjt:  QFDDEKSEGGILVATGPESMEKRVVVQALTAAPNCPWRQSKRICKSKPTKR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTTCAACTTCAGAGGCTTCGATGGAGGTTCAGCATCAAAAGATTTATGCTCTTCTTGATTTTGTGATGGAGTGTTGTAGAAATCATAGATTAATTTCTAGGAT
GGTGGAACCAGAGAACTCCTTTGTTTCTATTATGAAGGATGCAGTACTTGATTCAGCACTAATAGTTGACACTCTTACTGTTTTAAGTACTAATGAAGATGAGATAGTCA
ATGTTCCAAAGGAACATGTTGTACTTGTGGACAGCTTGCCTAAGTTTCATCCACCTCGAAAGGGTTTTTCAGCAATTAGAAGCTTTCCTCCCGGGTGCGGGAGGGGTGCT
CCTCGGGTTAGAACTCAACATGGCTCAAAATGCTTGCAGAACAATAGTTCAAGAACTAAAAAGAGACCTTGGTATGGAGCATCAACCAAAGTTGCAAAGAAATTAAATGC
TGCAAGTTATTCCGGAGCCAATCCGTGTAAGTCTTGGTTGCAGTCTCCAATCACTAGCAGAACAGAGTCTGAAGACCATAATCTTTTGGAGGATACAACAAGGAAGGCAA
CTGGGAATGAAGATATAAATATAGGGGGGAAGTTTTCTAGACAATTTGACGATGAGAAATCCGAGGGAGGAATACTTGTTGCAACTGGCCCTGAATCTATGGAGAAAAGG
GTCGTGGTGCAGGCTTTGACGGCAGCGCCAAATTGCCCATGGAGACAAAGCAAGAGAATTTGTAAATCGAAACCAACTAAGAGAATTTGCGAAGGCGAAGAACTTCAAGA
TTTA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTTCAACTTCAGAGGCTTCGATGGAGGTTCAGCATCAAAAGATTTATGCTCTTCTTGATTTTGTGATGGAGTGTTGTAGAAATCATAGATTAATTTCTAGGAT
GGTGGAACCAGAGAACTCCTTTGTTTCTATTATGAAGGATGCAGTACTTGATTCAGCACTAATAGTTGACACTCTTACTGTTTTAAGTACTAATGAAGATGAGATAGTCA
ATGTTCCAAAGGAACATGTTGTACTTGTGGACAGCTTGCCTAAGTTTCATCCACCTCGAAAGGGTTTTTCAGCAATTAGAAGCTTTCCTCCCGGGTGCGGGAGGGGTGCT
CCTCGGGTTAGAACTCAACATGGCTCAAAATGCTTGCAGAACAATAGTTCAAGAACTAAAAAGAGACCTTGGTATGGAGCATCAACCAAAGTTGCAAAGAAATTAAATGC
TGCAAGTTATTCCGGAGCCAATCCGTGTAAGTCTTGGTTGCAGTCTCCAATCACTAGCAGAACAGAGTCTGAAGACCATAATCTTTTGGAGGATACAACAAGGAAGGCAA
CTGGGAATGAAGATATAAATATAGGGGGGAAGTTTTCTAGACAATTTGACGATGAGAAATCCGAGGGAGGAATACTTGTTGCAACTGGCCCTGAATCTATGGAGAAAAGG
GTCGTGGTGCAGGCTTTGACGGCAGCGCCAAATTGCCCATGGAGACAAAGCAAGAGAATTTGTAAATCGAAACCAACTAAGAGAATTTGCGAAGGCGAAGAACTTCAAGA
TTTA
Protein sequenceShow/hide protein sequence
MESSTSEASMEVQHQKIYALLDFVMECCRNHRLISRMVEPENSFVSIMKDAVLDSALIVDTLTVLSTNEDEIVNVPKEHVVLVDSLPKFHPPRKGFSAIRSFPPGCGRGA
PRVRTQHGSKCLQNNSSRTKKRPWYGASTKVAKKLNAASYSGANPCKSWLQSPITSRTESEDHNLLEDTTRKATGNEDINIGGKFSRQFDDEKSEGGILVATGPESMEKR
VVVQALTAAPNCPWRQSKRICKSKPTKRICEGEELQDL