CuGenDBv2

Gene ID	MS006146
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	21 kDa protein
Genome location	scaffold96:506925..508538
RNA-Seq Expression	MS006146
Synteny	MS006146
Gene Ontology terms	GO:0003729 - mRNA binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039677.1 uncharacterized protein E6C27_scaffold558G00080 [Cucumis melo var. makuwa]

1.1e-98

82.77

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Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALS G TAT I + ++SI +R  P TITC+ WDPEGLFG+PQTGHIAR EFKRRLEKDAEAREAFER VREEKERR+ALRESR  PDN+  L+EYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRL EEFFSH+K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQ ELVKAR+ LTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        RSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKY+T
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

XP_008437135.1 PREDICTED: uncharacterized protein LOC103482648 [Cucumis melo]

2.8e-99

83.19

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Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALS G TAT I + ++SI +R  P TITC+ WDPEGLFG+PQTGHIAR EFKRRLEKDAEAREAFER VREEKERR+ALRESR IPDN+  L+EYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRL EEFFSH+K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQ ELVKAR+ LTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        RSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKY+T
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

XP_022156442.1 uncharacterized protein LOC111023335 [Momordica charantia]

1.1e-119

99.58

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Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDR IELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT
        RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT

XP_022958721.1 uncharacterized protein LOC111459862 [Cucurbita moschata]

1.8e-98

82.92

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Query:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF
        MAAL  G TAT I VS++SI  R+RPN  TITCV WDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFERQVREEKERR+ LR SR +P+N+  L+EYF
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFS +K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQGELVKAR+ LTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        LNRSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKYMT
Subjt:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

XP_038874696.1 uncharacterized protein LOC120067243 [Benincasa hispida]

6.6e-101

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Query:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF
        MAALS G TAT I   +SSI  RSRP+  TITC+ WDPEGLFGRPQTGHIAR EFKRRLEKDAEAREAFER VREEKERR+ALRESR IPDN+  L+EYF
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRL EEFFSH+K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQGELVKAR+ LTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        LNRSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKYMT
Subjt:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AT96 uncharacterized protein LOC103482648

1.3e-99

83.19

Show/hide

Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALS G TAT I + ++SI +R  P TITC+ WDPEGLFG+PQTGHIAR EFKRRLEKDAEAREAFER VREEKERR+ALRESR IPDN+  L+EYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRL EEFFSH+K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQ ELVKAR+ LTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        RSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKY+T
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

A0A5A7TDT6 Uncharacterized protein

5.1e-99

82.77

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Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALS G TAT I + ++SI +R  P TITC+ WDPEGLFG+PQTGHIAR EFKRRLEKDAEAREAFER VREEKERR+ALRESR  PDN+  L+EYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRL EEFFSH+K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQ ELVKAR+ LTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        RSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKY+T
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

A0A6J1DQM7 uncharacterized protein LOC111023335

5.3e-120

99.58

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Query:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
        MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLD

Query:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
        TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDR IELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN
Subjt:  TEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELN

Query:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT
        RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT
Subjt:  RSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMTT

A0A6J1H2V9 uncharacterized protein LOC111459862

8.7e-99

82.92

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Query:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF
        MAAL  G TAT I VS++SI  R+RPN  TITCV WDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFERQVREEKERR+ LR SR +P+N+  L+EYF
Subjt:  MAALSLGLTATRIRVSTSSIPARSRPN--TITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFS +K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQGELVKAR+ LTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        LNRSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKYMT
Subjt:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

A0A6J1KA41 uncharacterized protein LOC111491485

2.1e-97

82.08

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Query:  MAALSLGLTATRIRVSTSSIPARSR--PNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF
        MAAL  G TAT I VS++SI  R+R  P TITCV WDPEG+FG PQTGHIAR EFKRRLE+DAEAREAFE QVREEKERR+ LR SR +P+N+  L+EYF
Subjt:  MAALSLGLTATRIRVSTSSIPARSR--PNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYF

Query:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE
        LDTEAQDIEFEIARLRPRLTEEFFS +K ELG+LRF+V+KTEAMEDRVIELEALQKALEEG EAYDKMQGELVKAR+ LTKILTSKDVKATLLDMVERNE
Subjt:  LDTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNE

Query:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        LNRSLLALLDENI NAQ G+QK+AAAFMEK+RGAVLKYMT
Subjt:  LNRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G62780.1 unknown protein

4.0e-80

66.53

Show/hide

Query:  MAALSLGLTATRIRVSTSSIPA-RSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFL
        MA LS G+ A    V T  IP   SR + ITC  WDP+G+ G  QTGHIAR+EFKRRLE+D+EAREAF++Q+REEKERR+ALR+SR +PD  A+L+EYFL
Subjt:  MAALSLGLTATRIRVSTSSIPA-RSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFL

Query:  DTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNEL
        DTEAQ+IE+EIARLR RL +EFF+ ++ E+GQ+RF+V+KT  +EDR+IELE LQKALEEG EAYDKMQ EL+ A  SLTK+LTS D+K TLLDMVE+N++
Subjt:  DTEAQDIEFEIARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNEL

Query:  NRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT
        NRSLLALLDENI NA +G+QKEA  +MEKIR +VLKY+T
Subjt:  NRSLLALLDENIVNAQRGDQKEAAAFMEKIRGAVLKYMT

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGCTCTGAGTCTCGGCCTAACGGCCACCAGAATACGTGTTTCCACCAGTTCGATTCCCGCCCGCTCTCGTCCCAACACCATAACCTGCGTCTCATGGGACCCAGA
AGGCCTATTCGGACGGCCTCAGACCGGCCACATCGCTCGAATGGAGTTCAAGAGGCGACTGGAGAAGGACGCCGAAGCTCGCGAGGCCTTCGAGCGCCAAGTCCGGGAAG
AGAAAGAGCGCCGCAGAGCGCTTCGAGAGTCTCGTGAAATTCCGGACAATTTGGCCGACCTGGTCGAGTATTTTCTCGATACTGAAGCTCAGGATATTGAATTTGAAATT
GCCAGGTTGAGGCCCAGACTGACCGAGGAGTTTTTTTCACACTTGAAATTTGAGCTGGGTCAGCTTAGATTTTCTGTTTCAAAAACTGAGGCTATGGAAGATAGAGTGAT
AGAGTTGGAAGCACTACAGAAAGCACTTGAAGAAGGAACAGAAGCCTATGATAAAATGCAAGGTGAACTGGTAAAAGCAAGGCAAAGCTTAACCAAAATTTTAACATCAA
AGGATGTAAAAGCTACCTTGTTAGACATGGTCGAGCGAAACGAGCTCAATAGATCGTTACTGGCCCTTCTCGACGAAAATATAGTGAATGCACAAAGGGGTGACCAGAAG
GAAGCTGCTGCTTTCATGGAGAAGATCCGAGGGGCTGTTCTAAAGTACATGACAACT

mRNA sequence

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Protein sequence

Show/hide protein sequence

MAALSLGLTATRIRVSTSSIPARSRPNTITCVSWDPEGLFGRPQTGHIARMEFKRRLEKDAEAREAFERQVREEKERRRALRESREIPDNLADLVEYFLDTEAQDIEFEI
ARLRPRLTEEFFSHLKFELGQLRFSVSKTEAMEDRVIELEALQKALEEGTEAYDKMQGELVKARQSLTKILTSKDVKATLLDMVERNELNRSLLALLDENIVNAQRGDQK
EAAAFMEKIRGAVLKYMTT

MS006146 (gene) of Bitter gourd (TR) v1 genome