; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006150 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006150
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold96:586147..586326
RNA-Seq ExpressionMS006150
SyntenyMS006150
Gene Ontology termsGO:0006810 - transport (biological process)
GO:0009987 - cellular process (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041036.1 putative plant SNARE 11 [Cucumis melo var. makuwa]4.5e-0645.61Show/hide
Query:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFI
        ++ + + D+WR + +S+GGRL+L Q++LNSLP YLFS ++ L   I++MEK ++DF+
Subjt:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFI

KAF5806717.1 putative reverse transcriptase zinc-binding domain-containing protein [Helianthus annuus]3.8e-0543.86Show/hide
Query:  KARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K R  KW+  ++S GGRL+L +++L SLP+Y FS   A +K+I+ +E+ M +F+W G
Subjt:  KARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

KYP46897.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]1.0e-0544.07Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K++ +  KW+G ++S GGRL L +++LNS+P+Y  S  KA   VISQ+E  + +F+W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

KYP51226.1 Putative ribonuclease H protein At1g65750 family [Cajanus cajan]1.0e-0544.07Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K++ +  KW+G ++S GGRL L +++LNS+P+Y  S  KA   VISQ+E  + +F+W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

XP_023756501.1 uncharacterized protein LOC111905047 [Lactuca sativa]3.8e-0545.76Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K K+R   W+   +S GGRL+L +++LNSLP Y  S  KA Q +I Q+EK   +F+W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

TrEMBL top hitse value%identityAlignment
A0A151RWN5 Putative ribonuclease H protein At1g65750 family4.9e-0644.07Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K++ +  KW+G ++S GGRL L +++LNS+P+Y  S  KA   VISQ+E  + +F+W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

A0A151S8S9 Putative ribonuclease H protein At1g65750 family4.9e-0644.07Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K++ +  KW+G ++S GGRL L +++LNS+P+Y  S  KA   VISQ+E  + +F+W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

A0A5A7TG65 Putative plant SNARE 112.2e-0645.61Show/hide
Query:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFI
        ++ + + D+WR + +S+GGRL+L Q++LNSLP YLFS ++ L   I++MEK ++DF+
Subjt:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFI

A0A803QNN3 Uncharacterized protein3.7e-0643.33Show/hide
Query:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        +K   + D W+   +S GGRL+L Q++L+SLP+Y  S  KA + V+  +EK M DF+W G
Subjt:  KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

A0A803QQM3 Uncharacterized protein3.7e-0645.76Show/hide
Query:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG
        K   R D W+   +S GGRL+L Q++L+SLP+Y  S  KA + V+ ++EK M DF W G
Subjt:  KLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAAAGTTGAAGGCTAGGCCAGACAAATGGAGGGGCCTCATGATCTCAGAGGGAGGTAGACTGTCTCTTAAACAAGCTATCCTCAACAGTCTACCAGTGTATCTCTTCTC
CCCCATCAAAGCTCTCCAAAAAGTTATCAGCCAGATGGAAAAGACCATGACAGACTTCATCTGGAGTGGA
mRNA sequenceShow/hide mRNA sequence
AAAAAGTTGAAGGCTAGGCCAGACAAATGGAGGGGCCTCATGATCTCAGAGGGAGGTAGACTGTCTCTTAAACAAGCTATCCTCAACAGTCTACCAGTGTATCTCTTCTC
CCCCATCAAAGCTCTCCAAAAAGTTATCAGCCAGATGGAAAAGACCATGACAGACTTCATCTGGAGTGGA
Protein sequenceShow/hide protein sequence
KKLKARPDKWRGLMISEGGRLSLKQAILNSLPVYLFSPIKALQKVISQMEKTMTDFIWSG