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MS006151 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006151
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold96:604819..605136
RNA-Seq ExpressionMS006151
SyntenyMS006151
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50764.1 hypothetical protein EZV62_023288 [Acer yangbiense]1.2e-1441.58Show/hide
Query:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR
        V +L+   G W++GL+R+ F   E +LIL+I L      D ++WHFDK   FS+KS YK+     L+ +AS S    L+ WWK  W++++PSKI+IF W+
Subjt:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR

Query:  S
        +
Subjt:  S

TXG65555.1 hypothetical protein EZV62_006830 [Acer yangbiense]2.5e-1238.61Show/hide
Query:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR
        V +L+   G W++ L+R+ F   E+++IL+I L      D ++WHFDK   FSVKS YK+     L  +AS S     + WWK  W++++PSKI+ F W+
Subjt:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR

Query:  S
        +
Subjt:  S

XP_017250619.1 PREDICTED: uncharacterized protein LOC108221234 [Daucus carota subsp. sativus]4.6e-1446.53Show/hide
Query:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW
        +V + IT  G WN  LIR +F + + QLIL I L R  H+D   WH++    ++VKSGYKLV    L+   SSSS   +  WWK FW  +IP KI IF W
Subjt:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW

Query:  R
        R
Subjt:  R

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]1.2e-1446.24Show/hide
Query:  GAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRA-SSSSSAELILWWKGFWNMQIPSKIQIFLWR
        G W   ++R  F   EA+ IL+I +GR +  D+ IW+++KT ++SV+SGYK+        +A SSSSS E+  WW GFW M IP+KI++FLWR
Subjt:  GAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRA-SSSSSAELILWWKGFWNMQIPSKIQIFLWR

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]9.7e-1238.24Show/hide
Query:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW
        +V +LI     WNE +I  SF   +A +I +I L R    D+ IWH+D+  L+SVKSGY+L  K       +SS+ A     W+  W + +P KI+IF+W
Subjt:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW

Query:  RS
        ++
Subjt:  RS

TrEMBL top hitse value%identityAlignment
A0A5C7H1A9 zf-RVT domain-containing protein5.9e-1541.58Show/hide
Query:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR
        V +L+   G W++GL+R+ F   E +LIL+I L      D ++WHFDK   FS+KS YK+     L+ +AS S    L+ WWK  W++++PSKI+IF W+
Subjt:  VFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWR

Query:  S
        +
Subjt:  S

A0A6J1DAR4 uncharacterized protein LOC1110189545.9e-1546.24Show/hide
Query:  GAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRA-SSSSSAELILWWKGFWNMQIPSKIQIFLWR
        G W   ++R  F   EA+ IL+I +GR +  D+ IW+++KT ++SV+SGYK+        +A SSSSS E+  WW GFW M IP+KI++FLWR
Subjt:  GAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRA-SSSSSAELILWWKGFWNMQIPSKIQIFLWR

A0A803PAK3 Uncharacterized protein5.9e-1543.69Show/hide
Query:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW
        +V DLI     WN GL+   F   +  LI +I L  + H D  IWH + T ++SVKSGY L  K  L  +   SS  +   WWK FW +++PSKI+IFLW
Subjt:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW

Query:  RSI
        R+I
Subjt:  RSI

A0A803PC16 Uncharacterized protein4.5e-1544.66Show/hide
Query:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW
        +V DLI     WN GL+   F   +  LI +I L  V H D  IWH + T ++SVKSGY L  K  L  +   SS  +   WWK FW +++PSKI+IFLW
Subjt:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW

Query:  RSI
        R+I
Subjt:  RSI

A0A803QJ22 Uncharacterized protein7.7e-1544.66Show/hide
Query:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW
        +V DLI     WN  L+   F   +  LI +I L  V H D  IWH + T ++SVKSGY L  K  L  +   SS  +  LWWK FW +++PSKI+IFLW
Subjt:  RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLW

Query:  RSI
        R+I
Subjt:  RSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein7.2e-0526.32Show/hide
Query:  WNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWRSIASA
        W++  I    D  +   I  I+L +    D+ IW+++ T  ++V+SGY L+      +  + +     I      WN+ I  K++ FLWR+++ A
Subjt:  WNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWRSIASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CGAGTTTTTGATTTAATTACCGCTTTGGGAGCTTGGAACGAGGGGTTGATTCGGGCAAGTTTTGATGCTCGGGAGGCCCAGCTGATTTTGACCATCCATTTGGGTCGTGT
GAGCCATTCAGACCAACATATATGGCATTTTGATAAGACTTGTCTTTTTTCTGTCAAAAGTGGATACAAACTAGTCCAAAAGTATGGTTTGCACCATAGGGCGTCATCGT
CGTCGTCAGCTGAGTTGATTCTTTGGTGGAAGGGATTTTGGAATATGCAGATTCCGAGCAAGATACAAATATTTTTATGGCGGTCTATTGCGAGCGCT
mRNA sequenceShow/hide mRNA sequence
CGAGTTTTTGATTTAATTACCGCTTTGGGAGCTTGGAACGAGGGGTTGATTCGGGCAAGTTTTGATGCTCGGGAGGCCCAGCTGATTTTGACCATCCATTTGGGTCGTGT
GAGCCATTCAGACCAACATATATGGCATTTTGATAAGACTTGTCTTTTTTCTGTCAAAAGTGGATACAAACTAGTCCAAAAGTATGGTTTGCACCATAGGGCGTCATCGT
CGTCGTCAGCTGAGTTGATTCTTTGGTGGAAGGGATTTTGGAATATGCAGATTCCGAGCAAGATACAAATATTTTTATGGCGGTCTATTGCGAGCGCT
Protein sequenceShow/hide protein sequence
RVFDLITALGAWNEGLIRASFDAREAQLILTIHLGRVSHSDQHIWHFDKTCLFSVKSGYKLVQKYGLHHRASSSSSAELILWWKGFWNMQIPSKIQIFLWRSIASA