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MS006164 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006164
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold96:789920..790141
RNA-Seq ExpressionMS006164
SyntenyMS006164
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579294.1 hypothetical protein SDJN03_23742, partial [Cucurbita argyrosperma subsp. sororia]4.4e-1166.67Show/hide
Query:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        SLM+D +K   +STRRV IVLTKKQL+ L+ KQVSMEEL+  QQ+ KT  C+ LE SS WKPALAAIPEG E
Subjt:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

XP_011654573.1 uncharacterized protein LOC105435418 [Cucumis sativus]1.5e-1166.22Show/hide
Query:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        P S ++D  K  S STRRV IVLTKK+LQHLLAKQVS+E+LI   QL  T   ++LESSS WKPALAAIPEG E
Subjt:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

XP_022922389.1 uncharacterized protein LOC111430396 [Cucurbita moschata]4.4e-1166.67Show/hide
Query:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        SLM+D +K   +STRRV IVLTKKQL+ L+ KQVSMEEL+  QQ+ KT  C+ LE SS WKPALAAIPEG E
Subjt:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

XP_023551614.1 uncharacterized protein LOC111809394 [Cucurbita pepo subsp. pepo]9.8e-1165.28Show/hide
Query:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        +LM+D +K   +STRRV IVLTKKQL+ L+ KQVSMEEL+  QQ+ KT  C+ LE SS WKPALAAIPEG E
Subjt:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

XP_038875983.1 uncharacterized protein LOC120068327 [Benincasa hispida]2.6e-1167.57Show/hide
Query:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        P S  ED +K  S++T+RV IVLTKKQLQ LLAKQVSME+LI  QQL +T  C + ESSS WKPALAAIPEG E
Subjt:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

TrEMBL top hitse value%identityAlignment
A0A0A0KN21 Uncharacterized protein7.3e-1266.22Show/hide
Query:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        P S ++D  K  S STRRV IVLTKK+LQHLLAKQVS+E+LI   QL  T   ++LESSS WKPALAAIPEG E
Subjt:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

A0A1S3AUP7 uncharacterized protein LOC1034830078.9e-1060.81Show/hide
Query:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        P + ++D  K  S+STRRV IVLTKK+LQ LLAK+V+M++LI   QL  T   ++LESSS WKPALAAIPEG E
Subjt:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

A0A2N9IS98 Uncharacterized protein7.8e-0647.22Show/hide
Query:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        S+  D EK  +   +R+ IV+TK+QLQ LL KQ+S+E+++S    L+ R C  L+S++ WKP L AIPEG E
Subjt:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

A0A5A7TGH5 Uncharacterized protein8.9e-1060.81Show/hide
Query:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        P + ++D  K  S+STRRV IVLTKK+LQ LLAK+V+M++LI   QL  T   ++LESSS WKPALAAIPEG E
Subjt:  PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

A0A6J1E387 uncharacterized protein LOC1114303962.1e-1166.67Show/hide
Query:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE
        SLM+D +K   +STRRV IVLTKKQL+ L+ KQVSMEEL+  QQ+ KT  C+ LE SS WKPALAAIPEG E
Subjt:  SLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCTGATTCTTTGATGGAAGATCCTGAGAAAAGCACCAGTACAAGTACAAGGAGGGTCACAATCGTTCTAACAAAGAAACAGCTCCAACACTTACTCGCCAAACAAGTATC
CATGGAAGAACTAATTTCGCAGCAGCAGCTTCTTAAAACCCGGTTCTGCGCTGATCTCGAATCTTCATCTCCCTGGAAGCCAGCACTAGCAGCAATTCCTGAAGGAGTCG
AG
mRNA sequenceShow/hide mRNA sequence
CCTGATTCTTTGATGGAAGATCCTGAGAAAAGCACCAGTACAAGTACAAGGAGGGTCACAATCGTTCTAACAAAGAAACAGCTCCAACACTTACTCGCCAAACAAGTATC
CATGGAAGAACTAATTTCGCAGCAGCAGCTTCTTAAAACCCGGTTCTGCGCTGATCTCGAATCTTCATCTCCCTGGAAGCCAGCACTAGCAGCAATTCCTGAAGGAGTCG
AG
Protein sequenceShow/hide protein sequence
PDSLMEDPEKSTSTSTRRVTIVLTKKQLQHLLAKQVSMEELISQQQLLKTRFCADLESSSPWKPALAAIPEGVE