; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006169 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006169
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionauxin-responsive protein SAUR32-like
Genome locationscaffold96:835597..835911
RNA-Seq ExpressionMS006169
SyntenyMS006169
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605808.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2666.67Show/hide
Query:  KHHHL-HLNFHFHL-HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHHSHHRLHLPLP
        KH HL  LNFH HL H  HRSK D PKG +A+LVGQEQ+RFVIPV+ VNHPLFV+LLK+AE E+GF   GPISIPCP D FRTL  IIHH     HL + 
Subjt:  KHHHL-HLNFHFHL-HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHHSHHRLHLPLP

Query:  CF
        CF
Subjt:  CF

KAG7016800.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-3064.6Show/hide
Query:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH
        G GGDKH H LHLNFHFH+      H  HR+K + PKG +AILVGQ+Q+RFVIPV+ VNHPLF  LLKEAE E+GF   GPI+IPCP D FRTL  IIHH
Subjt:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH

Query:  SHHRLH-LPLPCF
         HH  H LP+ CF
Subjt:  SHHRLH-LPLPCF

KGN49830.1 hypothetical protein Csa_000428 [Cucumis sativus]6.8e-3467.26Show/hide
Query:  MGLGGDKHHH---LHLNFHFHLH----QRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH
        MG GGDKHHH   LHLNFHFH+H      HR+K + PKG +AILVGQEQQRF IPV+ VNHPLFV+LLK+AE E+GF   GPISIPCP D FRTL  II+
Subjt:  MGLGGDKHHH---LHLNFHFHLH----QRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH

Query:  HSHHRLHLPLPCF
        H HH  HLP+ CF
Subjt:  HSHHRLHLPLPCF

XP_022974339.1 auxin-responsive protein SAUR32-like [Cucurbita maxima]7.1e-3164.6Show/hide
Query:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH
        G GGDKH H LHLNFHFH+      H  HR+K + PKG +AILVGQ+Q+RFVIPV+ VNHPLF +LLKEAE E+GF   GPI+IPCP D FRTL  IIHH
Subjt:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH

Query:  SHHRLH-LPLPCF
         HH  H LP+ CF
Subjt:  SHHRLH-LPLPCF

XP_023549648.1 auxin-responsive protein SAUR32 [Cucurbita pepo subsp. pepo]1.2e-3064.6Show/hide
Query:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH
        G GGDKH H LHLNFHFH+      H  HR+K + PKG +AILVGQ+Q+RFVIPV+ VNHPLF  LLKEAE E+GF   GPI+IPCP D FRTL  IIHH
Subjt:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH

Query:  SHHRLH-LPLPCF
         HH  H LP+ CF
Subjt:  SHHRLH-LPLPCF

TrEMBL top hitse value%identityAlignment
A0A0A0KJC7 Uncharacterized protein3.3e-3467.26Show/hide
Query:  MGLGGDKHHH---LHLNFHFHLH----QRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH
        MG GGDKHHH   LHLNFHFH+H      HR+K + PKG +AILVGQEQQRF IPV+ VNHPLFV+LLK+AE E+GF   GPISIPCP D FRTL  II+
Subjt:  MGLGGDKHHH---LHLNFHFHLH----QRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH

Query:  HSHHRLHLPLPCF
        H HH  HLP+ CF
Subjt:  HSHHRLHLPLPCF

A0A1J6JXW6 Auxin-responsive protein saur323.3e-2654.46Show/hide
Query:  GDKHHHLHLNFHFHLHQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAII---------HH
        G+K HH HL+ H H  Q H +KDIP+G V +LVGQ  EQQ+FVIPV+ +NHPLF++LLKEAE+E+GFHH+GPI+IPC  ++FR +  II         HH
Subjt:  GDKHHHLHLNFHFHLHQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAII---------HH

Query:  SHHRLHLPLPCF
         HH  H    CF
Subjt:  SHHRLHLPLPCF

A0A5N6RIC8 Uncharacterized protein1.2e-2348.09Show/hide
Query:  MGLGGDKHH---HLHL-NFHFHLHQ-----RHRSKDIPKGFVAILVGQ---EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLH
        MG+ G++HH   H+H+ + HFH HQ         KDIPKG +AILVGQ   ++QRFVIPV+ +NHPLF++LLKE+E+E+GF+H GPI+IPC  ++FRT+ 
Subjt:  MGLGGDKHH---HLHL-NFHFHLHQ-----RHRSKDIPKGFVAILVGQ---EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLH

Query:  AII--------------HHSHHRLHLPLPCF
         II              HH HH  H  + CF
Subjt:  AII--------------HHSHHRLHLPLPCF

A0A6A5MGW4 Putative small auxin-up RNA1.2e-2356.64Show/hide
Query:  MGLGGD-----KHHHLHL---NFHFHLHQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAI
        MG+G D      +H LHL   + HFH H  H  KDIPKG +AILVGQ  EQQRFVIPV+  NHPLF++LLKEAE+E+GF H GPI IPC  +QFRT+  +
Subjt:  MGLGGD-----KHHHLHL---NFHFHLHQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAI

Query:  I-------HHSHH
        I       HH HH
Subjt:  I-------HHSHH

A0A6J1IHB8 auxin-responsive protein SAUR32-like3.4e-3164.6Show/hide
Query:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH
        G GGDKH H LHLNFHFH+      H  HR+K + PKG +AILVGQ+Q+RFVIPV+ VNHPLF +LLKEAE E+GF   GPI+IPCP D FRTL  IIHH
Subjt:  GLGGDKHHH-LHLNFHFHL------HQRHRSK-DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHH

Query:  SHHRLH-LPLPCF
         HH  H LP+ CF
Subjt:  SHHRLH-LPLPCF

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR361.9e-1052.46Show/hide
Query:  HRSKD-IPKGFVAILVGQEQ---QRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPC
        H+  D +P+G +AI VGQ+     R ++P+V  NHPLF ELL+EAE+E+GF H G I+IPC
Subjt:  HRSKD-IPKGFVAILVGQEQ---QRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPC

P32295 Indole-3-acetic acid-induced protein ARG71.1e-1050Show/hide
Query:  DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFR
        D PKG++A+ VG+  +RFVIPV  +N PLF +LL +AE+E G+ H  G ++IPC  D F+
Subjt:  DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFR

P33080 Auxin-induced protein X10A2.5e-1043.08Show/hide
Query:  RSKDIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFRTL
        +S ++PKG++ + VG + +RF+IPV  +N P F +LL +AE+E G+ H  G ++IPC  D+F T+
Subjt:  RSKDIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFRTL

P33083 Auxin-induced protein 6B4.9e-1141.43Show/hide
Query:  RSKDIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFRTLHAIIH
        ++ D+ KG++A+ VG++ +RFVIPV  +N P F +LL +AE+E G+HH +G ++IPC  D F+ + + ++
Subjt:  RSKDIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHH-HGPISIPCPPDQFRTLHAIIH

Q9ZUZ3 Auxin-responsive protein SAUR327.9e-1746.39Show/hide
Query:  NFHFHLHQRHRSKDIPKGFVAILV---GQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH--------HSHHRLH
        +F  H  Q  + KD+PKG +AI V   G+EQQRF++PV+  NHPLF++LLKEAE E+GF   G I+IPC  ++FR + A+I         ++HH  H
Subjt:  NFHFHLHQRHRSKDIPKGFVAILV---GQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH--------HSHHRLH

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family5.6e-1846.39Show/hide
Query:  NFHFHLHQRHRSKDIPKGFVAILV---GQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH--------HSHHRLH
        +F  H  Q  + KD+PKG +AI V   G+EQQRF++PV+  NHPLF++LLKEAE E+GF   G I+IPC  ++FR + A+I         ++HH  H
Subjt:  NFHFHLHQRHRSKDIPKGFVAILV---GQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH--------HSHHRLH

AT3G43120.1 SAUR-like auxin-responsive protein family1.2e-1247.54Show/hide
Query:  DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTL
        D+PKG++A+ VG E +RF+IP   ++H LF  LL++AE+E+GF H G ++IPC  + F+ L
Subjt:  DIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTL

AT3G61900.1 SAUR-like auxin-responsive protein family1.2e-1550Show/hide
Query:  HQRHRSKDIPKGFVAILVG---QEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH
        + +H  KD+PKG +AI VG   +E+QRFV+PV   NHPLF++LL+EAE+E+GF   G I+IPC  + FR +  +I+
Subjt:  HQRHRSKDIPKGFVAILVG---QEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIH

AT4G00880.1 SAUR-like auxin-responsive protein family9.6e-1844.64Show/hide
Query:  HLNFHFHL--HQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAII--------------HH
        H +FH     H  H  + +PKG +A+ VGQ  EQ+RFVIPV+  NHPLF +LLKEAE+E GF   G I+IPC  ++FR +  +I              HH
Subjt:  HLNFHFHL--HQRHRSKDIPKGFVAILVGQ--EQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAII--------------HH

Query:  SHHRLHLPLPCF
         HH  HL + CF
Subjt:  SHHRLHLPLPCF

AT5G53590.1 SAUR-like auxin-responsive protein family4.1e-2146.6Show/hide
Query:  HLHLNFHFHL--------HQRHRSKDIPKGFVAILVGQEQ-----QRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHHSHH
        H+   FHFH+        H  H   D+PKG VAI+VG E       RFV+P+V ++HPLF++LLKEAE+E+GF H GPI+IPC  D+F+ +  +I    H
Subjt:  HLHLNFHFHL--------HQRHRSKDIPKGFVAILVGQEQ-----QRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHHSHH

Query:  RLH
        R H
Subjt:  RLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTCGGCGGCGACAAGCACCACCACCTGCATCTCAATTTCCACTTTCATCTCCACCAGCGGCACCGGAGCAAGGACATTCCAAAGGGGTTCGTGGCCATTCTCGT
GGGCCAGGAGCAACAGAGGTTCGTGATCCCTGTGGTTGATGTGAACCACCCTCTCTTCGTGGAGCTGCTGAAGGAGGCCGAGCAGGAACATGGGTTCCACCACCACGGAC
CCATCTCCATCCCCTGCCCTCCCGACCAATTCCGCACCCTCCACGCCATTATTCACCACTCCCACCACCGTCTTCATCTTCCCCTTCCCTGTTTT
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTCGGCGGCGACAAGCACCACCACCTGCATCTCAATTTCCACTTTCATCTCCACCAGCGGCACCGGAGCAAGGACATTCCAAAGGGGTTCGTGGCCATTCTCGT
GGGCCAGGAGCAACAGAGGTTCGTGATCCCTGTGGTTGATGTGAACCACCCTCTCTTCGTGGAGCTGCTGAAGGAGGCCGAGCAGGAACATGGGTTCCACCACCACGGAC
CCATCTCCATCCCCTGCCCTCCCGACCAATTCCGCACCCTCCACGCCATTATTCACCACTCCCACCACCGTCTTCATCTTCCCCTTCCCTGTTTT
Protein sequenceShow/hide protein sequence
MGLGGDKHHHLHLNFHFHLHQRHRSKDIPKGFVAILVGQEQQRFVIPVVDVNHPLFVELLKEAEQEHGFHHHGPISIPCPPDQFRTLHAIIHHSHHRLHLPLPCF