; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006178 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006178
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein yippee-like
Genome locationscaffold96:891916..892930
RNA-Seq ExpressionMS006178
SyntenyMS006178
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145944.1 protein yippee-like At4g27740 [Cucumis sativus]3.3e-4180.77Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS P+YSCRNCR+PLASG HLLSKS+LAKSG+A+LFSEAKNIVEG KE +QLITG+FK A+IHC+ CGQ LGWKYLKAYD  QKYKEGKFIIE AKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
        +KEY
Subjt:  AKEY

XP_022137891.1 protein yippee-like At4g27740 [Momordica charantia]2.1e-5199.04Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYSRPSYSCRNCR+PLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
        AKEY
Subjt:  AKEY

XP_022958310.1 protein yippee-like At4g27740 [Cucurbita moschata]3.7e-4080.77Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS  +YSCR+CR+PLASG  LLSKS+LAKSG+A+LFS+AKNIVEG KEK+ LITGLFK ADIHCS CGQ+LGWKYLKAYD KQK+KEGKFIIERAKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
         KEY
Subjt:  AKEY

XP_023532447.1 protein yippee-like At4g27740 [Cucurbita pepo subsp. pepo]1.2e-3877.88Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS  +YSCR+CR+PLASG  LLSKS+LAKSG+A+LFS+AKNIVEG KE++ LITG+FK ADIHCS C Q+LGWKYLKAYD KQK+KEGKFIIERAKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
         KEY
Subjt:  AKEY

XP_038874274.1 protein yippee-like At4g27740 [Benincasa hispida]1.2e-4180.77Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS P+YSCRNCR+PLASG HLLSKS+ AKSG+A+LFSEAKNIVEG KE++QLITG+FK A+IHC+ CGQ+LGWKYLKAYD KQKYKEGKFIIE AKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
        +KEY
Subjt:  AKEY

TrEMBL top hitse value%identityAlignment
A0A0A0KN57 Protein yippee-like1.6e-4180.77Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS P+YSCRNCR+PLASG HLLSKS+LAKSG+A+LFSEAKNIVEG KE +QLITG+FK A+IHC+ CGQ LGWKYLKAYD  QKYKEGKFIIE AKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
        +KEY
Subjt:  AKEY

A0A5B6ZJA6 Protein yippee-like1.2e-3167.62Show/hide
Query:  MAEYS-RPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAK
        MAE +  P+YSC NCR+P+A    LLSK YLAKSG AYLFS A N+  G KE R+LITGLF IADI+CSNCG++LGWKYL+AYD +QK+KEG FIIE+ K
Subjt:  MAEYS-RPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAK

Query:  IAKEY
        I KEY
Subjt:  IAKEY

A0A6J1C809 Protein yippee-like1.0e-5199.04Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYSRPSYSCRNCR+PLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
        AKEY
Subjt:  AKEY

A0A6J1H345 Protein yippee-like1.8e-4080.77Show/hide
Query:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI
        MAEYS  +YSCR+CR+PLASG  LLSKS+LAKSG+A+LFS+AKNIVEG KEK+ LITGLFK ADIHCS CGQ+LGWKYLKAYD KQK+KEGKFIIERAKI
Subjt:  MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKI

Query:  AKEY
         KEY
Subjt:  AKEY

A0A6J5XKC1 Protein yippee-like1.5e-3163.81Show/hide
Query:  MAEY-SRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAK
        MA++   P +SCRNC++PLA    L+SK ++ KSG  Y+FS A NI+ G+KE R+L+TG+F IADI CSNCG++LGWKY++AYD  QKYKEGKFIIERAK
Subjt:  MAEY-SRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAK

Query:  IAKEY
        IAKEY
Subjt:  IAKEY

SwissProt top hitse value%identityAlignment
Q2V3E2 Protein yippee-like At4g277406.4e-2751.46Show/hide
Query:  AEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA
        A  + P+Y CRNC +PLA G  L+SK ++  SG A++FS A N+V G K  R+LITG + +AD+ CS CG+ LGWKY++ +D KQ+YKEG F+IE+ K+ 
Subjt:  AEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA

Query:  KEY
        K Y
Subjt:  KEY

Q65Z59 Protein yippee-like 14.0e-2151.04Show/hide
Query:  SYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE
        +YSC +CR+ LA+   L+SKS+    G+AYLF+   N+  G  E+R L+TGL  +ADI+C NC   LGWKY  A++  QKYKEGKFIIE A + K+
Subjt:  SYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE

Q9SR97 Protein yippee-like At3g089904.7e-2252.08Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY
        YSC+ C++  A    ++SKS+  K G+AYLF    N+  GEKE R +ITG   +ADI C +CG L+GWKY  AYD  QKYKEGKFI+ER K+   Y
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY

Q9T096 Protein yippee-like At4g277456.6e-2454.74Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE
        YSC NCR+ +     ++SK++  ++G+A+LFS A NIV G KE R L+TGL  +ADI C +C + LGWKY +AY+  QKYKEGKFI E+AKI KE
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE

Q9W2X7 Protein yippee-like1.8e-2153.12Show/hide
Query:  SYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE
        +YSC +CR+ LAS   L+SKS+    G AYLF+   N+  G+ E+R L+TGL  +ADI+C  C   LGWKY  AY+  QKYKEGKFIIE A + KE
Subjt:  SYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein1.4e-2147.31Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA
        YSC++C++ LA+   ++SKS+  K G+AYLF++  N+  GE E+R ++TG   +ADI C +CG ++GWKY  A++  QKYKEGK ++ER KI+
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA

AT3G08990.1 Yippee family putative zinc-binding protein3.4e-2352.08Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY
        YSC+ C++  A    ++SKS+  K G+AYLF    N+  GEKE R +ITG   +ADI C +CG L+GWKY  AYD  QKYKEGKFI+ER K+   Y
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY

AT3G08990.2 Yippee family putative zinc-binding protein3.4e-2352.08Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY
        YSC+ C++  A    ++SKS+  K G+AYLF    N+  GEKE R +ITG   +ADI C +CG L+GWKY  AYD  QKYKEGKFI+ER K+   Y
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY

AT4G27740.1 Yippee family putative zinc-binding protein4.5e-2851.46Show/hide
Query:  AEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA
        A  + P+Y CRNC +PLA G  L+SK ++  SG A++FS A N+V G K  R+LITG + +AD+ CS CG+ LGWKY++ +D KQ+YKEG F+IE+ K+ 
Subjt:  AEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIA

Query:  KEY
        K Y
Subjt:  KEY

AT4G27745.1 Yippee family putative zinc-binding protein4.7e-2554.74Show/hide
Query:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE
        YSC NCR+ +     ++SK++  ++G+A+LFS A NIV G KE R L+TGL  +ADI C +C + LGWKY +AY+  QKYKEGKFI E+AKI KE
Subjt:  YSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGTATTCGAGGCCTTCGTATAGCTGCAGAAATTGCCGCAGTCCCCTTGCCTCCGGAATTCATCTCCTTTCCAAATCCTACCTGGCAAAATCAGGGCAAGCATA
CCTATTCTCTGAAGCAAAGAACATAGTGGAGGGGGAGAAGGAGAAGAGGCAGCTGATAACAGGGCTTTTCAAAATTGCTGATATCCACTGCAGTAACTGTGGCCAACTTT
TGGGTTGGAAATATCTCAAAGCTTATGACTTCAAACAGAAATACAAGGAAGGGAAGTTCATCATTGAAAGAGCTAAGATTGCAAAGGAGTAC
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGTATTCGAGGCCTTCGTATAGCTGCAGAAATTGCCGCAGTCCCCTTGCCTCCGGAATTCATCTCCTTTCCAAATCCTACCTGGCAAAATCAGGGCAAGCATA
CCTATTCTCTGAAGCAAAGAACATAGTGGAGGGGGAGAAGGAGAAGAGGCAGCTGATAACAGGGCTTTTCAAAATTGCTGATATCCACTGCAGTAACTGTGGCCAACTTT
TGGGTTGGAAATATCTCAAAGCTTATGACTTCAAACAGAAATACAAGGAAGGGAAGTTCATCATTGAAAGAGCTAAGATTGCAAAGGAGTAC
Protein sequenceShow/hide protein sequence
MAEYSRPSYSCRNCRSPLASGIHLLSKSYLAKSGQAYLFSEAKNIVEGEKEKRQLITGLFKIADIHCSNCGQLLGWKYLKAYDFKQKYKEGKFIIERAKIAKEY