; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006179 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006179
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein yippee-like
Genome locationscaffold96:900531..901153
RNA-Seq ExpressionMS006179
SyntenyMS006179
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605800.1 Protein yippee-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.3e-5396.19Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDN
        IVRDN
Subjt:  IVRDN

XP_004145943.1 protein yippee-like At4g27745 isoform X3 [Cucumis sativus]4.9e-5698.11Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

XP_022138242.1 protein yippee-like At4g27745 [Momordica charantia]1.2e-57100Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

XP_022922143.1 protein yippee-like At4g27745 [Cucurbita moschata]2.4e-5597.17Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

XP_022958298.1 protein yippee-like At4g27745 [Cucurbita moschata]7.1e-5596.23Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMN TVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

TrEMBL top hitse value%identityAlignment
A0A0A0KQ44 Protein yippee-like2.4e-5698.11Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

A0A1S3AUL4 Protein yippee-like2.4e-5698.11Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

A0A5A7TKR3 Protein yippee-like2.4e-5698.11Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

A0A6J1C9L1 Protein yippee-like5.7e-58100Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

A0A6J1KA57 Protein yippee-like1.2e-5597.17Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MAELLGPRLYSCCNCRNHVA HDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDC  VLGWKYERAYEASQKYKEGKFILEKSK
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IVRDNW
Subjt:  IVRDNW

SwissProt top hitse value%identityAlignment
A6QPH8 Protein yippee-like 31.4e-3259.18Show/hide
Query:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN
        R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+HC +C   LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Subjt:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN

Q65Z54 Protein yippee-like 36.1e-3360.2Show/hide
Query:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN
        R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD++C +CH  LGWKYE+A+E SQKYKEGK+I+E S +++DN
Subjt:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN

Q65Z57 Protein yippee-like 31.4e-3259.18Show/hide
Query:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN
        R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD+HC +C   LGWKYE+A+E+SQKYKEGK+I+E + +++DN
Subjt:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN

Q6NWI4 Protein yippee-like 32.7e-3361.22Show/hide
Query:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN
        R YSC +CR H+A HDD+ISK+FQG  GRA+LF+  +N+  GP E+R L+TGLH VAD++C +CH  LGWKYE+A+E SQKYKEGKFI+E S +++DN
Subjt:  RLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDN

Q9T096 Protein yippee-like At4g277452.7e-4981.13Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MA+ +GPRLYSCCNCRNHV  HDDIISKAFQGR GRAFLFSHAMNI VGPKEDR+L+TGLHTVAD+ CVDC+  LGWKYERAYE SQKYKEGKFI EK+K
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IV+++W
Subjt:  IVRDNW

Arabidopsis top hitse value%identityAlignment
AT3G08990.1 Yippee family putative zinc-binding protein3.2e-2958.51Show/hide
Query:  LYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIV
        +YSC  C+ H A  +DIISK+F  +HGRA+LF + +N+TVG KE R ++TG HTVAD+ CV C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Subjt:  LYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIV

AT3G08990.2 Yippee family putative zinc-binding protein3.2e-2958.51Show/hide
Query:  LYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIV
        +YSC  C+ H A  +DIISK+F  +HGRA+LF + +N+TVG KE R ++TG HTVAD+ CV C  ++GWKYE AY+ SQKYKEGKFILE+ K++
Subjt:  LYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIV

AT3G11230.1 Yippee family putative zinc-binding protein5.5e-2955.43Show/hide
Query:  YSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKI
        YSC +C+ ++A  DD++SK+FQ RHG+A+LFS  +N+  G KEDR +MTG+HTV D++CV C   +GWKYE A+E +QKYKEGK +LE+ K+
Subjt:  YSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKI

AT3G11230.2 Yippee family putative zinc-binding protein5.5e-2955.43Show/hide
Query:  YSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKI
        YSC +C+ ++A  DD++SK+FQ RHG+A+LFS  +N+  G KEDR +MTG+HTV D++CV C   +GWKYE A+E +QKYKEGK +LE+ K+
Subjt:  YSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKI

AT4G27745.1 Yippee family putative zinc-binding protein1.9e-5081.13Show/hide
Query:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK
        MA+ +GPRLYSCCNCRNHV  HDDIISKAFQGR GRAFLFSHAMNI VGPKEDR+L+TGLHTVAD+ CVDC+  LGWKYERAYE SQKYKEGKFI EK+K
Subjt:  MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSK

Query:  IVRDNW
        IV+++W
Subjt:  IVRDNW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAACTATTGGGGCCCCGTTTGTATAGCTGCTGTAATTGTAGAAACCATGTTGCCTTCCACGATGATATAATTTCCAAAGCTTTTCAGGGAAGACATGGGCGTGC
TTTTCTGTTCTCTCATGCCATGAACATCACAGTGGGACCGAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCCGATGTGCATTGTGTTGACTGCCATGTGG
TGCTGGGATGGAAATATGAGAGGGCATATGAGGCATCACAGAAGTACAAAGAAGGGAAGTTCATTCTTGAAAAGTCAAAAATCGTTAGGGACAACTGG
mRNA sequenceShow/hide mRNA sequence
ATGGCTGAACTATTGGGGCCCCGTTTGTATAGCTGCTGTAATTGTAGAAACCATGTTGCCTTCCACGATGATATAATTTCCAAAGCTTTTCAGGGAAGACATGGGCGTGC
TTTTCTGTTCTCTCATGCCATGAACATCACAGTGGGACCGAAAGAAGACCGGCATCTCATGACGGGTCTCCACACTGTTGCCGATGTGCATTGTGTTGACTGCCATGTGG
TGCTGGGATGGAAATATGAGAGGGCATATGAGGCATCACAGAAGTACAAAGAAGGGAAGTTCATTCTTGAAAAGTCAAAAATCGTTAGGGACAACTGG
Protein sequenceShow/hide protein sequence
MAELLGPRLYSCCNCRNHVAFHDDIISKAFQGRHGRAFLFSHAMNITVGPKEDRHLMTGLHTVADVHCVDCHVVLGWKYERAYEASQKYKEGKFILEKSKIVRDNW