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MS006188 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006188
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionImportin subunit beta-1
Genome locationscaffold96:980200..980335
RNA-Seq ExpressionMS006188
SyntenyMS006188
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042542.1 importin subunit beta-1 [Cucumis melo var. makuwa]6.8e-0779.17Show/hide
Query:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
        MH+GVLS G DCILQV T R  GSCSL VVTNSCI  IMKALLTIALA
Subjt:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
KGN49854.1 hypothetical protein Csa_000509 [Cucumis sativus]6.8e-0779.17Show/hide
Query:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
        MH+GVLS G DCILQV T R  GSCSL VVTNSCI  IMKALLTIALA
Subjt:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
TrEMBL top hitse value%identityAlignment
A0A0A0KLW1 Uncharacterized protein3.3e-0779.17Show/hide
Query:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
        MH+GVLS G DCILQV T R  GSCSL VVTNSCI  IMKALLTIALA
Subjt:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
A0A5A7TGL2 Importin subunit beta-13.3e-0779.17Show/hide
Query:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
        MH+GVLS G DCILQV T R  GSCSL VVTNSCI  IMKALLTIALA
Subjt:  MHLGVLSRGQDCILQVVTYR-NGSCSLPVVTNSCI--IMKALLTIALA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATTTGGGTGTGTTGAGTCGGGGTCAAGATTGCATCTTACAAGTCGTCACTTACAGAAACGGAAGCTGTTCACTCCCAGTTGTCACTAACTCTTGCATCATCATGAA
AGCATTGCTAACTATTGCATTAGCA
mRNA sequenceShow/hide mRNA sequence
ATGCATTTGGGTGTGTTGAGTCGGGGTCAAGATTGCATCTTACAAGTCGTCACTTACAGAAACGGAAGCTGTTCACTCCCAGTTGTCACTAACTCTTGCATCATCATGAA
AGCATTGCTAACTATTGCATTAGCA
Protein sequenceShow/hide protein sequence
MHLGVLSRGQDCILQVVTYRNGSCSLPVVTNSCIIMKALLTIALA