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MS006191 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006191
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionImportin subunit beta-1
Genome locationscaffold96:997929..998175
RNA-Seq ExpressionMS006191
SyntenyMS006191
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042542.1 importin subunit beta-1 [Cucumis melo var. makuwa]3.5e-3091.57Show/hide
Query:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
        MHMGVL WGPDCILQVFTLRTTGSCSLLVVTNSCII IMKALLTIALAASS DLVCHGRSG+RERPLA PVR+AWSV IVSLT
Subjt:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
KGN49854.1 hypothetical protein Csa_000509 [Cucumis sativus]1.6e-3092.77Show/hide
Query:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
        MHMGVL WGPDCILQVFTLRTTGSCSLLVVTNSCII IMKALLTIALAASS DLVCHGRSGRRERPLA PVR+AWSV IVSLT
Subjt:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
TrEMBL top hitse value%identityAlignment
A0A0A0KLW1 Uncharacterized protein7.7e-3192.77Show/hide
Query:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
        MHMGVL WGPDCILQVFTLRTTGSCSLLVVTNSCII IMKALLTIALAASS DLVCHGRSGRRERPLA PVR+AWSV IVSLT
Subjt:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
A0A5A7TGL2 Importin subunit beta-11.7e-3091.57Show/hide
Query:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
        MHMGVL WGPDCILQVFTLRTTGSCSLLVVTNSCII IMKALLTIALAASS DLVCHGRSG+RERPLA PVR+AWSV IVSLT
Subjt:  MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCII-IMKALLTIALAASS-DLVCHGRSGRRERPLALPVRMAWSVRIVSLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGGTGTGTTGATTTGGGGTCCAGATTGCATCTTACAAGTCTTCACTCTCAGGACAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACTCTTGCATCATCAT
CATGAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTGATCTTGTATGTCATGGTAGAAGTGGGAGGAGGGAGCGTCCATTAGCGCTCCCAGTTCGTATGGCTTGGT
CGGTTCGAATTGTATCTCTGACT
mRNA sequenceShow/hide mRNA sequence
ATGCATATGGGTGTGTTGATTTGGGGTCCAGATTGCATCTTACAAGTCTTCACTCTCAGGACAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACTCTTGCATCATCAT
CATGAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTGATCTTGTATGTCATGGTAGAAGTGGGAGGAGGGAGCGTCCATTAGCGCTCCCAGTTCGTATGGCTTGGT
CGGTTCGAATTGTATCTCTGACT
Protein sequenceShow/hide protein sequence
MHMGVLIWGPDCILQVFTLRTTGSCSLLVVTNSCIIIMKALLTIALAASSDLVCHGRSGRRERPLALPVRMAWSVRIVSLT