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MS006196 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006196
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF688)
Genome locationscaffold96:1036500..1036943
RNA-Seq ExpressionMS006196
SyntenyMS006196
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605789.1 hypothetical protein SDJN03_03106, partial [Cucurbita argyrosperma subsp. sororia]3.9e-3560Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR
        MWSEPPH  E SSTP+L  S+L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  AGS+    +PP   LPP  R L     +Q+ L SPTTVLDGPE  R
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR

Query:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV
        A G  SKRWGSFR CKE+               GGG GR  +K    LSVSSY +SHFLV
Subjt:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV

XP_022158043.1 uncharacterized protein At4g00950-like [Momordica charantia]1.1e-7499.31Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS
        MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS

Query:  NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLVN
        NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLV+
Subjt:  NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLVN

XP_022958693.1 uncharacterized protein LOC111459844 [Cucurbita moschata]3.9e-3560Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR
        MWSEPPH  E SSTP+L  S+L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  AGS+    +PP   LPP  R L     +Q+ L SPTTVLDGPE  R
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR

Query:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV
        A G  SKRWGSFR CKE+               GGG GR  +K    LSVSSY +SHFLV
Subjt:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV

XP_022995989.1 uncharacterized protein At4g00950-like [Cucurbita maxima]1.0e-3560.62Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR
        MWSEPPH  E SSTP+L LS+L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  AGS+    +PP   LPP  R L     +Q+ L SPTTVLDGPE  R
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR

Query:  AGGSNSKRWGSFRKCKEIAV------------AGGGGGRLRRKRNVLLSVSSYSKSHFLV
        A G  SKRWGSFR CKE+               GGG GR  +K    LSVSSY +SHFLV
Subjt:  AGGSNSKRWGSFRKCKEIAV------------AGGGGGRLRRKRNVLLSVSSYSKSHFLV

XP_038875428.1 uncharacterized protein LOC120067888 [Benincasa hispida]8.4e-3054.22Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRL-----QTALPSPTTVLDG
        M SEPPH    +S PTL LS L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  A S+     P    LPP       PP+L     Q+ LPSPTT+LDG
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRL-----QTALPSPTTVLDG

Query:  PEIRRAGGSNSKRWGSFRKCKEI--------------AVAGGGGGRLRRKRNVLLSVSSYSKSHFL
        PE     G  SKRWGSFR  K+               A  GGG G  RRKR    SVSSY++SHFL
Subjt:  PEIRRAGGSNSKRWGSFRKCKEI--------------AVAGGGGGRLRRKRNVLLSVSSYSKSHFL

TrEMBL top hitse value%identityAlignment
A0A1S3AU39 uncharacterized protein LOC1034829694.7e-2656.49Show/hide
Query:  MWSEPPHAT-EPSSTPTLSLSQL-LPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPP-----LPPGERTLELPPRLQTALPSPTTVLDGPE
        M SEPPH T  P+STPTL LS L + + PWMPTPPRLTL S+PFLWEEAPGKPR    S+     P     LPP  R L+   +    LPSPTTVLDG E
Subjt:  MWSEPPHAT-EPSSTPTLSLSQL-LPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPP-----LPPGERTLELPPRLQTALPSPTTVLDGPE

Query:  IRRAGGSNSKRWGSFRKCKEIAVAGGGGGRLRRKRNV-LLSVSSY-SKSHFLVN
          R G   SKRWGSFR C+     GGG GR RR R+   LS+SSY + S FLVN
Subjt:  IRRAGGSNSKRWGSFRKCKEIAVAGGGGGRLRRKRNV-LLSVSSY-SKSHFLVN

A0A5A7TKS5 Uncharacterized protein3.2e-2757.14Show/hide
Query:  MWSEPPHAT-EPSSTPTLSLSQL-LPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPP-----LPPGERTLELPPRLQTALPSPTTVLDGPE
        M SEPPH T  P+STPTL LS L + + PWMPTPPRLTL S+PFLWEEAPGKPR    S+     P     LPP  R L+   +    LPSPTTVLDG E
Subjt:  MWSEPPHAT-EPSSTPTLSLSQL-LPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPP-----LPPGERTLELPPRLQTALPSPTTVLDGPE

Query:  IRRAGGSNSKRWGSFRKCKEIAVAGGGGGRLRRKRNV-LLSVSSY-SKSHFLVN
          R G   SKRWGSFR C+     GGG GR RR R+   LS+SSY + SHFLVN
Subjt:  IRRAGGSNSKRWGSFRKCKEIAVAGGGGGRLRRKRNV-LLSVSSY-SKSHFLVN

A0A6J1DV06 uncharacterized protein At4g00950-like5.4e-7599.31Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS
        MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGS

Query:  NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLVN
        NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLV+
Subjt:  NSKRWGSFRKCKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLVN

A0A6J1H3S6 uncharacterized protein LOC1114598441.9e-3560Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR
        MWSEPPH  E SSTP+L  S+L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  AGS+    +PP   LPP  R L     +Q+ L SPTTVLDGPE  R
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR

Query:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV
        A G  SKRWGSFR CKE+               GGG GR  +K    LSVSSY +SHFLV
Subjt:  AGGSNSKRWGSFRKCKEIA------------VAGGGGGRLRRKRNVLLSVSSYSKSHFLV

A0A6J1K7H0 uncharacterized protein At4g00950-like5.0e-3660.62Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR
        MWSEPPH  E SSTP+L LS+L PEPPWMPTPPRLTLAS+PFLWEEAPGKPR  AGS+    +PP   LPP  R L     +Q+ L SPTTVLDGPE  R
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQ----APPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRR

Query:  AGGSNSKRWGSFRKCKEIAV------------AGGGGGRLRRKRNVLLSVSSYSKSHFLV
        A G  SKRWGSFR CKE+               GGG GR  +K    LSVSSY +SHFLV
Subjt:  AGGSNSKRWGSFRKCKEIAV------------AGGGGGRLRRKRNVLLSVSSYSKSHFLV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00950.1 Protein of unknown function (DUF688)8.5e-0437.17Show/hide
Query:  EPPHATEPSSTPTLSLSQLLPEPP-----WMPTPPRLTL-ASIPFLWEEAPGKPRQCAGSQAPPSPPLP-------PGE--RTLELPPRLQ---------
        E    TE     T+    +LP  P      M +P   ++ AS+PF WEE PGKP+Q + S +  S   P       P E  ++LELPPRL          
Subjt:  EPPHATEPSSTPTLSLSQLLPEPP-----WMPTPPRLTL-ASIPFLWEEAPGKPRQCAGSQAPPSPPLP-------PGE--RTLELPPRLQ---------

Query:  TALPSPTTVLDGP
        T L SP TV DGP
Subjt:  TALPSPTTVLDGP

AT4G27810.1 unknown protein1.8e-0939.86Show/hide
Query:  EPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGE-------RTLELPPRL---QTALPSPTTVLDGP---------EIRRAGGSNSKRW
        + P + TPP     S+PFLWEEAPGKPR  +    P +      E       R LELPPRL       PSPTTVLDGP          IRR+  ++  R+
Subjt:  EPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGE-------RTLELPPRL---QTALPSPTTVLDGP---------EIRRAGGSNSKRW

Query:  GSFRKCKEIAVAGGGG-----GRLRRKRNVLLSVSSYSKSHFL
           R        GGGG      R+RRK ++L    S+SKS FL
Subjt:  GSFRKCKEIAVAGGGG-----GRLRRKRNVLLSVSSYSKSHFL

AT5G51680.1 hydroxyproline-rich glycoprotein family protein1.3e-0438.64Show/hide
Query:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTP---PRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSP
        +W E P   + +  P  SL+  +P PP +P P   P   + S+PF WEE PGKP   A S  PP  P PP          L+TA P+P
Subjt:  MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTP---PRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSP

AT5G53030.1 unknown protein1.0e-0939.68Show/hide
Query:  PWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRL-----QTAL--PSPTTVLDGP---------------------------
        P + TPP     S+PFLWEEAPGKPR+    + P         R+LELPPRL      T +  PSPTTVLDGP                           
Subjt:  PWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRL-----QTAL--PSPTTVLDGP---------------------------

Query:  ---EIRRAGGSNSKRWGSFRKCKEIA
           E R  GGS+  RWGSF  CKE++
Subjt:  ---EIRRAGGSNSKRWGSFRKCKEIA

AT5G53030.2 unknown protein1.0e-0939.68Show/hide
Query:  PWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRL-----QTAL--PSPTTVLDGP---------------------------
        P + TPP     S+PFLWEEAPGKPR+    + P         R+LELPPRL      T +  PSPTTVLDGP                           
Subjt:  PWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRL-----QTAL--PSPTTVLDGP---------------------------

Query:  ---EIRRAGGSNSKRWGSFRKCKEIA
           E R  GGS+  RWGSF  CKE++
Subjt:  ---EIRRAGGSNSKRWGSFRKCKEIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTCGGAGCCGCCGCATGCGACGGAACCGAGCTCTACTCCGACGCTATCTCTCTCTCAGCTTCTGCCGGAGCCGCCGTGGATGCCCACGCCGCCGCGTTTAACTCT
GGCCTCAATCCCCTTCCTGTGGGAGGAGGCGCCGGGCAAGCCCCGCCAATGCGCCGGATCACAAGCTCCGCCGTCGCCACCGCTGCCGCCGGGAGAGAGAACGTTGGAGC
TGCCTCCGCGGCTGCAGACCGCTCTGCCGTCGCCTACAACGGTGCTCGACGGCCCGGAAATTAGGAGGGCCGGGGGATCCAACTCCAAGAGATGGGGCAGTTTCAGGAAG
TGTAAGGAGATCGCCGTCGCCGGCGGCGGCGGCGGGAGGCTTAGAAGGAAGAGAAATGTATTGCTATCAGTTTCATCTTATTCAAAATCACACTTCTTGGTAAACTGCTC
CAAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTCGGAGCCGCCGCATGCGACGGAACCGAGCTCTACTCCGACGCTATCTCTCTCTCAGCTTCTGCCGGAGCCGCCGTGGATGCCCACGCCGCCGCGTTTAACTCT
GGCCTCAATCCCCTTCCTGTGGGAGGAGGCGCCGGGCAAGCCCCGCCAATGCGCCGGATCACAAGCTCCGCCGTCGCCACCGCTGCCGCCGGGAGAGAGAACGTTGGAGC
TGCCTCCGCGGCTGCAGACCGCTCTGCCGTCGCCTACAACGGTGCTCGACGGCCCGGAAATTAGGAGGGCCGGGGGATCCAACTCCAAGAGATGGGGCAGTTTCAGGAAG
TGTAAGGAGATCGCCGTCGCCGGCGGCGGCGGCGGGAGGCTTAGAAGGAAGAGAAATGTATTGCTATCAGTTTCATCTTATTCAAAATCACACTTCTTGGTAAACTGCTC
CAAA
Protein sequenceShow/hide protein sequence
MWSEPPHATEPSSTPTLSLSQLLPEPPWMPTPPRLTLASIPFLWEEAPGKPRQCAGSQAPPSPPLPPGERTLELPPRLQTALPSPTTVLDGPEIRRAGGSNSKRWGSFRK
CKEIAVAGGGGGRLRRKRNVLLSVSSYSKSHFLVNCSK