; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006201 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006201
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein BOBBER 1
Genome locationscaffold96:1095286..1102475
RNA-Seq ExpressionMS006201
SyntenyMS006201
Gene Ontology termsGO:0006457 - protein folding (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0051082 - unfolded protein binding (molecular function)
InterPro domainsIPR007052 - CS domain
IPR008978 - HSP20-like chaperone
IPR037898 - NudC family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579322.1 Protein BOBBER 1, partial [Cucurbita argyrosperma subsp. sororia]7.0e-14385.8Show/hide
Query:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV
        MAIISDYEEKEEI KPK+P      SSSSSAKPSQFNA+FDPSNPLGFLEKVFDF+AKESDFL RD  EKEIETVVRRAVEKRKK E+SLEH  K EKR+
Subjt:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV

Query:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
        KEE R+VK+E + VKEEP+TVAS  EEK+ VKLE  +EE    NGPRVPN GNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
Subjt:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ

Query:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
        PPVIDG+LCQIVKPDDCYWSIEDQS ISILLTKHNQMEWWKYLVKG+PE+DTQKVEPENSKL+DLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
Subjt:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK

Query:  KFMAEHPEMDFSRAKIS
        KFMAEHPEMDFSRAK+S
Subjt:  KFMAEHPEMDFSRAKIS

KAG7035749.1 Protein BOBBER 1 [Cucurbita argyrosperma subsp. argyrosperma]4.5e-14284.42Show/hide
Query:  MAIISDYEEKEEIPKPKKPSS-------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK
        MAIIS+YEEKEEIPKPKKPSS       SSSS+KPSQF+ANFDPSNPLGFL +VFDF+AKESDFL RD VEKEIETVVRRAVEKRKK  +SLE   K EK
Subjt:  MAIISDYEEKEEIPKPKKPSS-------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK

Query:  RVKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVG
        R+KEE  +VK+E  P TVK+EP+ VAS  EEK+DVKLE+  EEKKE+NGPRVPN+GNGLDM+NY WTQTLQEVN+NVPVPKGTKSRFVVCEIKKNHLKVG
Subjt:  RVKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVG

Query:  LKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
        LKGQPPVIDG+L QIVKPDDCYWSIEDQS+ISILLTKHNQMEWWKYLVKGEPE+DTQKVEPENSKLSDLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Subjt:  LKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQ

Query:  EILKKFMAEHPEMDFSRAKIS
        +ILKKFMAEHPEMDFSRAKIS
Subjt:  EILKKFMAEHPEMDFSRAKIS

XP_022158046.1 protein BOBBER 1 [Momordica charantia]3.7e-16899.68Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEEPR
        MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRK EKRVKEEPR
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEEPR

Query:  TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID
        TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID
Subjt:  TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID

Query:  GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE
        GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE
Subjt:  GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE

Query:  HPEMDFSRAKIS
        HPEMDFSRAKIS
Subjt:  HPEMDFSRAKIS

XP_022922435.1 protein BOBBER 1-like [Cucurbita moschata]1.6e-14285.49Show/hide
Query:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV
        MAIISDYEEKEEI KPK+P      SSSSSAKPSQFNA+FDPSNPLGFLEKVFDF+AKESDFL RD  EKEIETVVRRAVEKRKK E+SLEH  K EKR+
Subjt:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV

Query:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
        KEE R+VK+E + VKEEP+TVAS  EEK+ +KLE  +EE    NGPRVPN GNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
Subjt:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ

Query:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
        PPVIDG+LCQIVKPDDCYWSIEDQS ISILLTKHNQMEWWKYLVKG+PE+DTQKVEPENSKL+DLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
Subjt:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK

Query:  KFMAEHPEMDFSRAKIS
        KFMAEHPEMDFSRAK+S
Subjt:  KFMAEHPEMDFSRAKIS

XP_023534559.1 protein BOBBER 1-like [Cucurbita pepo subsp. pepo]7.7e-14284.38Show/hide
Query:  MAIISDYEEKEEIPKPKKPSS------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKR
        MAIIS+YEEKEEIPKPKKPSS      SSSS+KPSQF+ANFDPSNPLGFL +VFDF+AKESDFL RD VEKEIETVVRRAVEKRKK  +SLE   K EKR
Subjt:  MAIISDYEEKEEIPKPKKPSS------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKR

Query:  VKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGL
        +KEE  +VK+E  P TVK+EP+ VAS  +EK+DVKLE+  EEKKE+NGPRVPN+GNGLDM+NY WTQTLQEVN+NVPVPKGTKSRFVVCEIKKNHLKVGL
Subjt:  VKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGL

Query:  KGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQE
        KGQPPVIDG+L QIVKPDDCYWSIEDQS+ISILLTKHNQMEWWKYLVKGEPE+DTQKVEPENSKLSDLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Subjt:  KGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQE

Query:  ILKKFMAEHPEMDFSRAKIS
        ILKKFMAEHPEMDFSRAKIS
Subjt:  ILKKFMAEHPEMDFSRAKIS

TrEMBL top hitse value%identityAlignment
A0A6J1DZV9 protein BOBBER 11.8e-16899.68Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEEPR
        MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRK EKRVKEEPR
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEEPR

Query:  TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID
        TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID
Subjt:  TVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVID

Query:  GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE
        GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE
Subjt:  GDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAE

Query:  HPEMDFSRAKIS
        HPEMDFSRAKIS
Subjt:  HPEMDFSRAKIS

A0A6J1E8R0 protein BOBBER 1-like7.5e-14385.49Show/hide
Query:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV
        MAIISDYEEKEEI KPK+P      SSSSSAKPSQFNA+FDPSNPLGFLEKVFDF+AKESDFL RD  EKEIETVVRRAVEKRKK E+SLEH  K EKR+
Subjt:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV

Query:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
        KEE R+VK+E + VKEEP+TVAS  EEK+ +KLE  +EE    NGPRVPN GNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
Subjt:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ

Query:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
        PPVIDG+LCQIVKPDDCYWSIEDQS ISILLTKHNQMEWWKYLVKG+PE+DTQKVEPENSKL+DLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
Subjt:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK

Query:  KFMAEHPEMDFSRAKIS
        KFMAEHPEMDFSRAK+S
Subjt:  KFMAEHPEMDFSRAKIS

A0A6J1H279 protein BOBBER 1-like1.4e-14183.8Show/hide
Query:  MAIISDYEEKEEIPKPKKPSS-------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK
        MAIIS+YEEKEEIPKPKKPSS       SSSS+KPSQF+ANFDPSNPLGFL +VFDF+AKESDFL RD VEKEIETVVRRAVEKRKK  +S+E   K EK
Subjt:  MAIISDYEEKEEIPKPKKPSS-------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK

Query:  RVKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVG
        R+KEE  +VK+E  P TVK+EP+ VAS +E K+DVKLE+  EEKKE+NGPRVPN+GNGLDM+NY WTQTLQEVN+NVPVPKGTKSRFVVCEIKKNHLKVG
Subjt:  RVKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVG

Query:  LKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
        LKGQPPVIDG+L QIVKPDDCYWSIEDQS+ISILLTKHNQMEWWKYLVKGEPE+DTQKVEPENSKLSDLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQ
Subjt:  LKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQ

Query:  EILKKFMAEHPEMDFSRAKIS
        +ILKKFMAEHPEMDFSRAKIS
Subjt:  EILKKFMAEHPEMDFSRAKIS

A0A6J1I7M3 protein BOBBER 1-like1.9e-13883.28Show/hide
Query:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV
        MAIISDYEEKEEI KPK+P      SSSSSAKPSQFNA+FDPSNPLG LEKVFDF+A ESDFL RD  EKEIE VVRRAVEKRKK E+SLEH  K EKR+
Subjt:  MAIISDYEEKEEIPKPKKP-----SSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRV

Query:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ
        KEE R+VK+E + VKEE +TVAS  EEK+ V LE  ++E    NGPRVPN GNGLDMDNYSWTQTLQEVNVNVPVPKGTKS+FVVCEIKKNHLKVGLKGQ
Subjt:  KEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQ

Query:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK
        PPVIDG+LCQIVKPDDCYWSIEDQS ISILLTKHNQMEWWKYLVKG+PE+DTQKVEPENSKL+DLD ETRQTVEKMMFDQRQKS+GLPTSDEMQKQEILK
Subjt:  PPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILK

Query:  KFMAEHPEMDFSRAKIS
        KFMAEHPEMDFSRAK+S
Subjt:  KFMAEHPEMDFSRAKIS

A0A6J1K9G4 protein BOBBER 1-like1.4e-14183.75Show/hide
Query:  MAIISDYEEKEEIPKPKKPSS------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKR
        MAIIS+YEEKEEIPKPKKPSS      SSSS+KPSQF+ANFDPSNPLGFL +VFDF+AKESDFL RD VEKEIETVVRRAVEKRKK  +SLE   K EKR
Subjt:  MAIISDYEEKEEIPKPKKPSS------SSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKR

Query:  VKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGL
        +KEE  +VK+E  P TVK++P+ VAS  EEK+DVKLE+  EEKKE+NGPRVPN+GNGLDM+NY WTQ+LQEVN+NVPVPKGTKSRFVVCEIKKNHLKVGL
Subjt:  VKEEPRTVKEE--PRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGL

Query:  KGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQE
        KGQPPVIDG+L QIVKPDDCYWSIEDQS+ISILLTKHNQMEWWKYL+KGEPE+DTQKVEPENSKLSDLD ETRQTVEKMMFDQRQKSMGLPTSDEMQKQ+
Subjt:  KGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQE

Query:  ILKKFMAEHPEMDFSRAKIS
        ILKKFMAEHPEMDFSRAKIS
Subjt:  ILKKFMAEHPEMDFSRAKIS

SwissProt top hitse value%identityAlignment
O35685 Nuclear migration protein nudC4.1e-5347.13Show/hide
Query:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGA-----EEKKEDNGPRVPNHGNGLDMD
        E   R+  E+R+K E +   ++         ++++   EE   ++ E    K+     A L    +D   +Q A     EE ++D G   PN GNG D+ 
Subjt:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGA-----EEKKEDNGPRVPNHGNGLDMD

Query:  NYSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVE
        NY WTQTL E+++ VP  V    K + VV +I++ HL+VGLKGQPPV+DG+L   VK ++  W IED  ++++ L K N+MEWW  LV  +PE++T+K+ 
Subjt:  NYSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVE

Query:  PENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS
        PENSKLSDLD+ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS+AK +
Subjt:  PENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS

Q63525 Nuclear migration protein nudC3.5e-5246.74Show/hide
Query:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKE-----DNGPRVPNHGNGLDMD
        E   R+  E+R+K E +   ++         ++++   EE   ++ E    K+       L    +D   +Q AEE+++     D G   PN GNG D+ 
Subjt:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKE-----DNGPRVPNHGNGLDMD

Query:  NYSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVE
        NY WTQTL E+++ VP  V    K + VV +I++ HL+VGLKGQ PVIDG+L   VK ++  W IED  ++++ L K N+MEWW  LV  +PE++T+K+ 
Subjt:  NYSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVE

Query:  PENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS
        PENSKLSDLD+ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS+AK +
Subjt:  PENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS

Q9LV09 Protein BOBBER 11.3e-9160.32Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQED---SLEHSRKVEKRVKE
        MAIIS+ EE+          SSSS      F A    +NPLGFLEKVFDF+ ++SDFL + + E EI   VR A EK KK E      E  + VEK+ ++
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQED---SLEHSRKVEKRVKE

Query:  EPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPP
        E   + E+    +    T+A+ + E I+V+  +  EEKKE +GP VPN GNG D++NYSW Q LQEV VN+PVP GTK+R VVCEIKKN LKVGLKGQ P
Subjt:  EPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPP

Query:  VIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
        ++DG+L + VKPDDCYW+IEDQ +ISILLTK +QMEWWK  VKGEPE+DTQKVEPE SKL DLD ETR TVEKMMFDQRQK MGLPTS+E+QKQEILKKF
Subjt:  VIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF

Query:  MAEHPEMDFSRAKIS
        M+EHPEMDFS AK +
Subjt:  MAEHPEMDFSRAKIS

Q9STN7 Protein BOBBER 22.6e-8455.41Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEE
        MAIIS+ EE                A+PS   F A+FDPSNP+ FLEKV D I KES+FL +DT EKEI   V  A ++ ++ E        V+    E+
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEE

Query:  PRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPV
        P+    +P T  E+P+  + +A + +++  E+  EEK  ++GP VPN GNGLD + YSW Q LQEV +N+P+P+GTKSR V CEIKKN LKVGLKGQ  +
Subjt:  PRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPV

Query:  IDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM
        +DG+    VKPDDC+W+IEDQ MIS+LLTK +QMEWWKY VKGEPE+DTQKVEPE SKL DLD ETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM
Subjt:  IDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM

Query:  AEHPEMDFSRAKIS
        A++P MDFS AK +
Subjt:  AEHPEMDFSRAKIS

Q9Y266 Nuclear migration protein nudC5.9e-5246.54Show/hide
Query:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKE----DNGPRVPNHGNGLDMDN
        E   R+  E+R+K E +   ++         ++++   EE   ++ E    K+     A L    +D   +Q  EE +E    D G   PN GNG D+ N
Subjt:  ETVVRRAVEKRKKQEDSLEHSR---------KVEKRVKEEPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKE----DNGPRVPNHGNGLDMDN

Query:  YSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEP
        Y WTQTL E+++ VP  V    K + +V +I++ HL+VGLKGQP +IDG+L   VK ++  W IED  ++++ L K N+MEWW  LV  +PE++T+K+ P
Subjt:  YSWTQTLQEVNVNVP--VPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEP

Query:  ENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS
        ENSKLSDLD+ETR  VEKMM+DQRQKSMGLPTSDE +KQEILKKFM +HPEMDFS+AK +
Subjt:  ENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS

Arabidopsis top hitse value%identityAlignment
AT2G27280.1 Coiled-coil domain-containing protein 55 (DUF2040)4.9e-0957.14Show/hide
Query:  FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK
        F+A+F+PSNPLGFLE V DFI KES+FL +DT EKEI   V  A E+ ++ E   E S  VEK
Subjt:  FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEK

AT4G27890.1 HSP20-like chaperones superfamily protein1.9e-8555.41Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEE
        MAIIS+ EE                A+PS   F A+FDPSNP+ FLEKV D I KES+FL +DT EKEI   V  A ++ ++ E        V+    E+
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQ--FNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEE

Query:  PRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPV
        P+    +P T  E+P+  + +A + +++  E+  EEK  ++GP VPN GNGLD + YSW Q LQEV +N+P+P+GTKSR V CEIKKN LKVGLKGQ  +
Subjt:  PRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPV

Query:  IDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM
        +DG+    VKPDDC+W+IEDQ MIS+LLTK +QMEWWKY VKGEPE+DTQKVEPE SKL DLD ETR +VEKMMFDQRQK MGLP SDE++K+++LKKFM
Subjt:  IDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFM

Query:  AEHPEMDFSRAKIS
        A++P MDFS AK +
Subjt:  AEHPEMDFSRAKIS

AT5G53400.1 HSP20-like chaperones superfamily protein9.2e-9360.32Show/hide
Query:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQED---SLEHSRKVEKRVKE
        MAIIS+ EE+          SSSS      F A    +NPLGFLEKVFDF+ ++SDFL + + E EI   VR A EK KK E      E  + VEK+ ++
Subjt:  MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQED---SLEHSRKVEKRVKE

Query:  EPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPP
        E   + E+    +    T+A+ + E I+V+  +  EEKKE +GP VPN GNG D++NYSW Q LQEV VN+PVP GTK+R VVCEIKKN LKVGLKGQ P
Subjt:  EPRTVKEEPRTVKEEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPP

Query:  VIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF
        ++DG+L + VKPDDCYW+IEDQ +ISILLTK +QMEWWK  VKGEPE+DTQKVEPE SKL DLD ETR TVEKMMFDQRQK MGLPTS+E+QKQEILKKF
Subjt:  VIDGDLCQIVKPDDCYWSIEDQSMISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKF

Query:  MAEHPEMDFSRAKIS
        M+EHPEMDFS AK +
Subjt:  MAEHPEMDFSRAKIS

AT5G58740.1 HSP20-like chaperones superfamily protein1.1e-1327.81Show/hide
Query:  EQGAEEKKED---NGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISIL
        E+ A EK+ D   NG +V           + W QTL+EVN+ + +P     +   C+I+  H++VG+KG PP ++ DL   VK D  +W++ED  M  I 
Subjt:  EQGAEEKKED---NGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQSMISIL

Query:  LTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS
        L K  + + W   + G+ ++D    + E                                   QK+ +L++F  E+P  DFS+A+ S
Subjt:  LTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTATCTCCGATTACGAAGAGAAAGAGGAAATCCCCAAGCCCAAGAAGCCTTCCTCGTCGTCTTCATCGGCCAAGCCTTCTCAGTTCAATGCCAACTTCGATCC
TTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTATTGCCAAGGAGAGCGACTTTCTTTTCAGGGATACAGTCGAGAAGGAGATCGAGACGGTAGTGCGTAGAG
CTGTGGAGAAGAGAAAGAAGCAGGAAGACTCACTTGAGCATAGTAGAAAGGTTGAGAAGAGGGTGAAGGAGGAGCCGAGGACTGTCAAGGAGGAGCCCAGGACCGTGAAG
GAGGAGCCGCAGACTGTGGCATCTCTGGCAGAAGAGAAGATTGATGTGAAGTTGGAGCAAGGCGCCGAGGAGAAGAAAGAGGACAATGGGCCTAGAGTTCCCAACCACGG
TAATGGTCTTGATATGGACAACTACTCTTGGACACAGACACTCCAAGAAGTGAATGTTAATGTACCAGTACCCAAAGGAACCAAATCCAGGTTTGTGGTGTGTGAGATCA
AGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCGCCAGTGATAGATGGAGATCTTTGTCAGATTGTCAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGC
ATGATCTCTATTCTTTTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAGTGAAGGGTGAACCTGAGGTTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACT
GTCTGATTTGGATGCAGAAACAAGGCAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAGTCCATGGGACTCCCAACCAGTGATGAGATGCAGAAGCAGGAGATTC
TGAAGAAGTTCATGGCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATCTCA
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTATCTCCGATTACGAAGAGAAAGAGGAAATCCCCAAGCCCAAGAAGCCTTCCTCGTCGTCTTCATCGGCCAAGCCTTCTCAGTTCAATGCCAACTTCGATCC
TTCAAACCCTCTAGGGTTTTTGGAGAAGGTGTTCGATTTTATTGCCAAGGAGAGCGACTTTCTTTTCAGGGATACAGTCGAGAAGGAGATCGAGACGGTAGTGCGTAGAG
CTGTGGAGAAGAGAAAGAAGCAGGAAGACTCACTTGAGCATAGTAGAAAGGTTGAGAAGAGGGTGAAGGAGGAGCCGAGGACTGTCAAGGAGGAGCCCAGGACCGTGAAG
GAGGAGCCGCAGACTGTGGCATCTCTGGCAGAAGAGAAGATTGATGTGAAGTTGGAGCAAGGCGCCGAGGAGAAGAAAGAGGACAATGGGCCTAGAGTTCCCAACCACGG
TAATGGTCTTGATATGGACAACTACTCTTGGACACAGACACTCCAAGAAGTGAATGTTAATGTACCAGTACCCAAAGGAACCAAATCCAGGTTTGTGGTGTGTGAGATCA
AGAAGAATCATCTCAAAGTTGGACTAAAGGGTCAACCGCCAGTGATAGATGGAGATCTTTGTCAGATTGTCAAGCCAGATGATTGTTATTGGAGCATAGAGGATCAGAGC
ATGATCTCTATTCTTTTGACCAAGCACAACCAAATGGAGTGGTGGAAGTATTTAGTGAAGGGTGAACCTGAGGTTGATACTCAGAAGGTTGAACCTGAGAACAGCAAACT
GTCTGATTTGGATGCAGAAACAAGGCAAACAGTTGAAAAGATGATGTTCGATCAAAGGCAGAAGTCCATGGGACTCCCAACCAGTGATGAGATGCAGAAGCAGGAGATTC
TGAAGAAGTTCATGGCTGAGCATCCGGAGATGGACTTTTCAAGGGCAAAGATCTCA
Protein sequenceShow/hide protein sequence
MAIISDYEEKEEIPKPKKPSSSSSSAKPSQFNANFDPSNPLGFLEKVFDFIAKESDFLFRDTVEKEIETVVRRAVEKRKKQEDSLEHSRKVEKRVKEEPRTVKEEPRTVK
EEPQTVASLAEEKIDVKLEQGAEEKKEDNGPRVPNHGNGLDMDNYSWTQTLQEVNVNVPVPKGTKSRFVVCEIKKNHLKVGLKGQPPVIDGDLCQIVKPDDCYWSIEDQS
MISILLTKHNQMEWWKYLVKGEPEVDTQKVEPENSKLSDLDAETRQTVEKMMFDQRQKSMGLPTSDEMQKQEILKKFMAEHPEMDFSRAKIS