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MS006205 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006205
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationscaffold96:1132796..1133137
RNA-Seq ExpressionMS006205
SyntenyMS006205
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009064 - glutamine family amino acid metabolic process (biological process)
GO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR012875 - Succinate dehydrogenase assembly factor 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3477.19Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPG+EQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]2.2e-3071.93Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNLSRLFSS  +LSALPAVSR+T NSLSR VSSS+NQQPSR ++GV  EEQREAGK S PN+HE AGDD+   D+   GVD  + T E+GGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWER GRC DF
Subjt:  RYGDWERNGRCYDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]8.8e-3578.07Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]1.4e-3578.95Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL+AL AV+RVTS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]2.0e-3477.19Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL++L AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial1.1e-3071.93Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNLSRLFSS  +LSALPAVSR+T NSLSR VSSS+NQQPSR ++GV  EEQREAGK S PN+HE AGDD+   D+   GVD  + T E+GGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWER GRC DF
Subjt:  RYGDWERNGRCYDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial1.4e-3071.93Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSS+LSRLFSS  +LSALP V R+TSNSLSR VSSS+NQQPSRS+QGV  EEQREA K S PNQHE AGDD+   D    GVD  +   E+GGPKG EPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial4.2e-3578.07Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL+AL AV+R TS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial6.5e-3678.95Show/hide
Query:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT
        MSSNL+RLFS   SL+AL AV+RVTS S+SRLVSSSANQQPSR +QGVPGEEQREAGK SLP+QHE AGDD+D +D+   G D+N+ATGEVGGPKGPEPT
Subjt:  MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPT

Query:  RYGDWERNGRCYDF
        RYGDWERNGRCYDF
Subjt:  RYGDWERNGRCYDF

W9RP47 Succinate dehydrogenase assembly factor 4, mitochondrial1.2e-1652.85Show/hide
Query:  MSSNLSRLFSSLQSLSALPAV---------SRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEV
        M+SNL RLFSS+ +LS    +         +R  +NS SRLVSSSA Q+P   Q+ +  +EQREA  + L N+ E      D  +D++ G  LNE TGEV
Subjt:  MSSNLSRLFSSLQSLSALPAV---------SRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEV

Query:  GGPKGPEPTRYGDWERNGRCYDF
        GGP+GPEPTRYGDWERNGRCYDF
Subjt:  GGPKGPEPTRYGDWERNGRCYDF

SwissProt top hitse value%identityAlignment
Q54Y25 Succinate dehydrogenase assembly factor 4, mitochondrial1.3e-0432.14Show/hide
Query:  SNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPTRY
        +NL   F+ +  L+A    +++  +  S  ++++ N   + +   +   ++ E  KE+     +   D +++ D+D+    +N  T E+GGPKGPEPTRY
Subjt:  SNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPTRY

Query:  GDWERNGRCYDF
         DWERNGR  DF
Subjt:  GDWERNGRCYDF

Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial2.2e-0442.31Show/hide
Query:  QQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQ--DDDDDDDGGVDLNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        ++ S SQ G     ++   K  LP     A +D   + +  +    D+N  T E GGP+GPEPTRYGDWER GRC DF
Subjt:  QQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQ--DDDDDDDGGVDLNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial6.8e-0646.48Show/hide
Query:  EEQREAGKESLPNQHEPAG--DDQDDDDDDDGGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCYDF
        E + E  K++L     P G  D  +D  ++   +     D+N  T E GGPKGPEPTRYGDWER GRC DF
Subjt:  EEQREAGKESLPNQHEPAG--DDQDDDDDDDGGV-----DLNEATGEVGGPKGPEPTRYGDWERNGRCYDF

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial4.7e-0776.67Show/hide
Query:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF
        N  TGE+GGP GPEPTRYGDWER GR  DF
Subjt:  NEATGEVGGPKGPEPTRYGDWERNGRCYDF

Arabidopsis top hitse value%identityAlignment
AT5G67490.1 unknown protein3.7e-0737.39Show/hide
Query:  SSNLSRLFSSLQSLSA--LPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEP
        ++N+ RL +  +S+S+  L  VSR  S+      +    Q PS +Q      +  +  +++L  Q E    ++++ +   GG  +NE TGE+GGP+GPEP
Subjt:  SSNLSRLFSSLQSLSA--LPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEP

Query:  TRYGDWERNGRCYDF
        TRYGDWE+ GRC DF
Subjt:  TRYGDWERNGRCYDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCAATCTCAGCCGTTTATTCTCGTCGCTGCAGAGTCTCTCAGCCCTACCGGCGGTGAGTCGCGTCACTTCCAACTCGTTGAGCCGACTCGTCAGCTCCTCGGC
GAATCAGCAGCCTTCTCGTTCGCAGCAAGGCGTCCCCGGCGAGGAACAACGTGAGGCCGGGAAAGAAAGCTTGCCAAATCAACACGAGCCTGCGGGAGATGATCAAGACG
ACGACGACGACGACGACGGAGGAGTTGATTTGAATGAAGCTACCGGCGAGGTCGGTGGACCTAAAGGCCCTGAGCCCACCCGCTACGGCGATTGGGAACGAAACGGCCGG
TGCTACGATTTT
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCAATCTCAGCCGTTTATTCTCGTCGCTGCAGAGTCTCTCAGCCCTACCGGCGGTGAGTCGCGTCACTTCCAACTCGTTGAGCCGACTCGTCAGCTCCTCGGC
GAATCAGCAGCCTTCTCGTTCGCAGCAAGGCGTCCCCGGCGAGGAACAACGTGAGGCCGGGAAAGAAAGCTTGCCAAATCAACACGAGCCTGCGGGAGATGATCAAGACG
ACGACGACGACGACGACGGAGGAGTTGATTTGAATGAAGCTACCGGCGAGGTCGGTGGACCTAAAGGCCCTGAGCCCACCCGCTACGGCGATTGGGAACGAAACGGCCGG
TGCTACGATTTT
Protein sequenceShow/hide protein sequence
MSSNLSRLFSSLQSLSALPAVSRVTSNSLSRLVSSSANQQPSRSQQGVPGEEQREAGKESLPNQHEPAGDDQDDDDDDDGGVDLNEATGEVGGPKGPEPTRYGDWERNGR
CYDF