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MS006209 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006209
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold96:1166460..1166679
RNA-Seq ExpressionMS006209
SyntenyMS006209
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON41695.1 hypothetical protein PanWU01x14_287580 [Parasponia andersonii]2.5e-0641.89Show/hide
Query:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        + + HLFLHC F LS+W KIL  FG SW  PK   + L I   +      + LW  A +A  W  W +RN R+F
Subjt:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

PON63797.1 hypothetical protein TorRG33x02_275070 [Trema orientale]2.5e-0641.89Show/hide
Query:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        + + HLFLHC F LS+W KIL  FG SW  PK   + L I   +      + LW  A +A  W  W +RN R+F
Subjt:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

PON81686.1 hypothetical protein TorRG33x02_225050 [Trema orientale]1.4e-0640.85Show/hide
Query:  HLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQ-IDPVMP-AKLLWFNAIVATFWRTWFKRNHRVF
        HLF+HCP   S+W+++L  FG+ W +PK     L+    I+      K LW  A++ATFW  W  RN R+F
Subjt:  HLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQ-IDPVMP-AKLLWFNAIVATFWRTWFKRNHRVF

XP_030479135.1 uncharacterized protein LOC115696374 [Cannabis sativa]4.9e-0736.62Show/hide
Query:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        ++HLFLHC F   +W+ +L  FG+ W  P+ + + L+  +I       +LW  A++AT W  W +RN R+F
Subjt:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

XP_030505044.1 uncharacterized protein LOC115720016 [Cannabis sativa]2.9e-0736.62Show/hide
Query:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        ++HLFLHC F   +W+ +L  FG+ W  P+ + + L+  +I       +LW  A++AT W  W +RN R+F
Subjt:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

TrEMBL top hitse value%identityAlignment
A0A2P5AYR5 Uncharacterized protein1.2e-0641.89Show/hide
Query:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        + + HLFLHC F LS+W KIL  FG SW  PK   + L I   +      + LW  A +A  W  W +RN R+F
Subjt:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEAL-IQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

A0A2P5E831 Uncharacterized protein7.0e-0740.85Show/hide
Query:  HLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQ-IDPVMP-AKLLWFNAIVATFWRTWFKRNHRVF
        HLF+HCP   S+W+++L  FG+ W +PK     L+    I+      K LW  A++ATFW  W  RN R+F
Subjt:  HLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQ-IDPVMP-AKLLWFNAIVATFWRTWFKRNHRVF

A0A803P465 Uncharacterized protein1.8e-0739.73Show/hide
Query:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        + + HLFL C FI  IW  +L  FG+SW  P+ +   +    I      K LW +AI+AT W  W +RN R+F
Subjt:  QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

A0A803PZR8 Uncharacterized protein1.4e-0736.62Show/hide
Query:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        ++HLFLHC F   +W+ +L  FG+ W  P+ + + L+  +I       +LW  A++AT W  W +RN R+F
Subjt:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

A0A803QGT5 Uncharacterized protein2.4e-0736.62Show/hide
Query:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF
        ++HLFLHC F   +W+ +L  FG+ W  P+ + + L+  +I       +LW  A++AT W  W +RN R+F
Subjt:  IQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGGCATCCAGCATCTTTTCCTCCATTGTCCTTTCATACTATCTATTTGGGCAAAGATTTTAGCTCTCTTTGGCATAAGCTGGTGTTTTCCAAAGAAAATTGGGGAAGC
CCTAATCCAACTTCAAATTGACCCTGTTATGCCAGCTAAGCTTCTTTGGTTCAATGCTATCGTGGCAACCTTTTGGAGAACTTGGTTTAAGAGAAATCATAGGGTCTTC
mRNA sequenceShow/hide mRNA sequence
CAGGGCATCCAGCATCTTTTCCTCCATTGTCCTTTCATACTATCTATTTGGGCAAAGATTTTAGCTCTCTTTGGCATAAGCTGGTGTTTTCCAAAGAAAATTGGGGAAGC
CCTAATCCAACTTCAAATTGACCCTGTTATGCCAGCTAAGCTTCTTTGGTTCAATGCTATCGTGGCAACCTTTTGGAGAACTTGGTTTAAGAGAAATCATAGGGTCTTC
Protein sequenceShow/hide protein sequence
QGIQHLFLHCPFILSIWAKILALFGISWCFPKKIGEALIQLQIDPVMPAKLLWFNAIVATFWRTWFKRNHRVF