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MS006217 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006217
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription factor TRY
Genome locationscaffold96:1264868..1265388
RNA-Seq ExpressionMS006217
SyntenyMS006217
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016898876.1 PREDICTED: transcription factor TRY [Cucumis melo]1.9e-3491.46Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR QKQ KI+PLDSE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

XP_022159376.1 transcription factor TRY-like isoform X1 [Momordica charantia]3.9e-40100Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

XP_022159377.1 transcription factor TRY-like isoform X2 [Momordica charantia]2.8e-3898.8Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        MDNHRQQKQPKITPLDSE EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

XP_022958649.1 transcription factor TRY-like [Cucurbita moschata]1.6e-3390.24Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR Q+Q K TPL+SE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

XP_022996343.1 transcription factor TRY-like [Cucurbita maxima]1.6e-3390.24Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR Q+Q K TPL+SE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

TrEMBL top hitse value%identityAlignment
A0A1S4DSB1 transcription factor TRY9.0e-3591.46Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR QKQ KI+PLDSE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

A0A5D3C2B2 Transcription factor TRY9.0e-3591.46Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR QKQ KI+PLDSE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGF +RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

A0A6J1DZP2 transcription factor TRY-like isoform X21.3e-3898.8Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        MDNHRQQKQPKITPLDSE EVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

A0A6J1E3Q8 transcription factor TRY-like isoform X11.9e-40100Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

A0A6J1KAI4 transcription factor TRY-like7.6e-3490.24Show/hide
Query:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        MDNHR Q+Q K TPL+SE EVSSTRWQ ITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFA RRR
Subjt:  MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

SwissProt top hitse value%identityAlignment
B3H4X8 MYB-like transcription factor TCL21.8e-1957.69Show/hide
Query:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        R +KQ K T L   AEV+S +W+ I MT QEEDLI RMH+L+GDRWDLIAGR+ GR+ ++IERYWIM + +  + +RR
Subjt:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

O22059 Transcription factor CPC3.5e-2060.76Show/hide
Query:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        R+++Q K     SE EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR+
Subjt:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

Q84RD1 MYB-like transcription factor ETC24.3e-1864.18Show/hide
Query:  DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR
        DSE EVSS  W+ I+MT QEEDLI RM++L+G+RWDLIAGR+ GRK  EIERYWIM + + F+ +RR
Subjt:  DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRR

Q8GV05 Transcription factor TRY3.6e-2567.07Show/hide
Query:  DNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        D  R++KQ KI   DSE EVSS  W+ I MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA++RR+
Subjt:  DNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

Q9M157 MYB-like transcription factor ETC33.5e-2060.27Show/hide
Query:  MDNHRQQKQPKITPL--DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR+ KQPK   +   S  EVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRQQKQPKITPL--DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

Arabidopsis top hitse value%identityAlignment
AT2G46410.1 Homeodomain-like superfamily protein2.5e-2160.76Show/hide
Query:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        R+++Q K     SE EVSS  W+ + M+ +EEDLI RM+KL+GDRW+LIAGRIPGR PEEIERYW+M H   FA RRR+
Subjt:  RQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE

AT4G01060.1 CAPRICE-like MYB34.3e-2158.67Show/hide
Query:  MDNHRQQKQPK----ITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR+ KQPK    +T      EVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRQQKQPK----ITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT4G01060.2 CAPRICE-like MYB31.5e-2161.11Show/hide
Query:  MDNHRQQKQPKITPL-DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR+ KQPK   +  S +EVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRQQKQPKITPL-DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT4G01060.3 CAPRICE-like MYB32.5e-2160.27Show/hide
Query:  MDNHRQQKQPKITPL--DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM
        MDNHR+ KQPK   +   S  EVSS  W+++ M+ +EEDL+ RMHKL+GDRW+LIAGRIPGR   EIER+W+M
Subjt:  MDNHRQQKQPKITPL--DSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIM

AT5G53200.1 Homeodomain-like superfamily protein2.6e-2667.07Show/hide
Query:  DNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE
        D  R++KQ KI   DSE EVSS  W+ I MT QEEDLI RM++L+GDRWDLIAGR+PGR+PEEIERYWIM + EGFA++RR+
Subjt:  DNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAATCATCGTCAACAGAAACAACCTAAAATCACTCCACTGGACTCTGAAGCAGAAGTCAGCAGCACTAGGTGGCAGCTTATAACTATGACAGCACAAGAGGAAGA
TCTTATCCATAGAATGCATAAGCTGATTGGAGACAGGTGGGACCTGATAGCGGGTAGAATTCCTGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACC
TTGAAGGATTTGCAGAGAGAAGAAGAGAA
mRNA sequenceShow/hide mRNA sequence
ATGGACAATCATCGTCAACAGAAACAACCTAAAATCACTCCACTGGACTCTGAAGCAGAAGTCAGCAGCACTAGGTGGCAGCTTATAACTATGACAGCACAAGAGGAAGA
TCTTATCCATAGAATGCATAAGCTGATTGGAGACAGGTGGGACCTGATAGCGGGTAGAATTCCTGGGCGTAAACCAGAAGAAATAGAGAGGTATTGGATAATGACTCACC
TTGAAGGATTTGCAGAGAGAAGAAGAGAA
Protein sequenceShow/hide protein sequence
MDNHRQQKQPKITPLDSEAEVSSTRWQLITMTAQEEDLIHRMHKLIGDRWDLIAGRIPGRKPEEIERYWIMTHLEGFAERRRE