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MS006236 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006236
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibosomal protein S19
Genome locationscaffold96:1412136..1412264
RNA-Seq ExpressionMS006236
SyntenyMS006236
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002222 - Ribosomal protein S19/S15
IPR023575 - Ribosomal protein S19/S15, superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
WP_131747057.1 ribosomal protein S19 family protein [Candidatus Frankia meridionalis]1.8e-1288.37Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEG+VGHKFGEFASTRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
YP_003587230.1 ribosomal protein S19 [Citrullus lanatus]1.0e-1288.37Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEGR+GHKFGEFASTRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
YP_003587264.1 ribosomal protein S19 [Citrullus lanatus]2.0e-1186.05Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G   VRCKITEGRVGHKFGEFA TRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
YP_009041175.1 ribosomal protein S19 [Rhazya stricta]9.7e-1183.72Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEG+VGHKFGEFASTRKRR SRTNIGPG+K G
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
YP_009913640.1 ribosomal protein S19 [Luffa acutangula]7.9e-1390.7Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEGRVGHKFGEFASTRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
TrEMBL top hitse value%identityAlignment
A0A060D4Y0 Ribosomal protein S194.7e-1183.72Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEG+VGHKFGEFASTRKRR SRTNIGPG+K G
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
A0A7D6C0E4 Ribosomal protein S193.8e-1390.7Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEGRVGHKFGEFASTRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
A0A7L7T747 Ribosomal protein S196.1e-1181.4Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G   VRCKITEG+VGHKFGEFASTRKRR SRTNIGPG+K G
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
D5I3A0 Ribosomal protein S195.0e-1388.37Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G  SVRCKITEGR+GHKFGEFASTRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
D5I3D4 Ribosomal protein S199.4e-1286.05Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G   VRCKITEGRVGHKFGEFA TRKRR SRTNIGPGKKGG
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
SwissProt top hitse value%identityAlignment
P27527 Ribosomal protein S19, mitochondrial3.1e-1279.07Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
        Y G   VRCKITEG+VGHKFGEFA TRKRR SRTNIGPG+K G
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG
P39697 40S ribosomal protein S19, mitochondrial7.5e-0678.57Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRK
        Y G   VRCKITEG+VGHKFGEFA TRK
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRK
Arabidopsis top hitse value%identityAlignment
AT5G47320.1 ribosomal protein S195.3e-0778.57Show/hide
Query:  YTGTRSVRCKITEGRVGHKFGEFASTRK
        Y G   VRCKITEG+VGHKFGEFA TRK
Subjt:  YTGTRSVRCKITEGRVGHKFGEFASTRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACACAGGGACTAGATCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGATTTTCGAGAACAAATATTGG
ACCGGGAAAAAAAGGGGGA
mRNA sequenceShow/hide mRNA sequence
TACACAGGGACTAGATCTGTTCGTTGTAAGATCACTGAAGGAAGGGTTGGTCATAAATTTGGAGAGTTTGCTTCGACACGGAAACGAAGATTTTCGAGAACAAATATTGG
ACCGGGAAAAAAAGGGGGA
Protein sequenceShow/hide protein sequence
YTGTRSVRCKITEGRVGHKFGEFASTRKRRFSRTNIGPGKKGG