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MS006238 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006238
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWD repeat-containing protein 91-like protein
Genome locationscaffold96:1425839..1426372
RNA-Seq ExpressionMS006238
SyntenyMS006238
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579338.1 hypothetical protein SDJN03_23786, partial [Cucurbita argyrosperma subsp. sororia]4.2e-5263.79Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL
        MA GELKR F+EL  +NEKQE++V YH+ KVQNIV GYLIW   F + +SQ  SF KCN+WWV+LA++LL  F+YFLLFLDA+TML   QYQLD++C+EL
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL

Query:  TQICQQILVVKNQGDVGLMEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLC
         + CQQ L+ KN+ D+ L+EAGES D F+F FH+K+LMLD   I GR VY+ F VCALLAV AIELYA KYLLC
Subjt:  TQICQQILVVKNQGDVGLMEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLC

KAG7016840.1 hypothetical protein SDJN02_21951, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-5564.97Show/hide
Query:  SIVMALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMC
        SIVMA GELKR  +EL  +NEKQE++V YH+ KVQNIV GYLIW   FF+ +SQ  SF KCN+WWV+LA++LL  F+YFLLFLDA+TML   QYQLD++C
Subjt:  SIVMALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMC

Query:  EELTQICQQILVVKNQGDVGLMEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLC
        +EL + CQQ L+ KN+ D+ L+EAGESCD F+F FH+K+LMLD   I GR VY+ F VCALLAV AIELYA KYLLC
Subjt:  EELTQICQQILVVKNQGDVGLMEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLC

XP_022157130.1 uncharacterized protein LOC111023927 [Momordica charantia]8.0e-5162.92Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEE
        M  GELKRNFE LK + EKQESRV+YHE++ QNI + YLIWG  FFFA+SQT SS LKC DWW+VL +++ CAFVYFL FL+AVTML+  Q+Q+D++C+E
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEE

Query:  LTQICQQILVVKNQ-GDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
          +ICQQILV ++Q  DV L MEAG+S D F FSFH K+L     RI  RK Y+C TV ALLAVTAIELYAC +L C+
Subjt:  LTQICQQILVVKNQ-GDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

XP_022157176.1 uncharacterized protein LOC111023953 isoform X2 [Momordica charantia]1.8e-5567.05Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL
        MA+GEL+R F ELK INEKQESRVRYHE K Q IV GYLI    FFF +SQTSS  KC+DWWV+L+++LLC+FVYFLLFLDA T L+ T+ QLD++C+EL
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL

Query:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
         ++CQQILV +NQ DV L ME G+  D F+F FHEK+L+LD  R  GRKVY+ FTVCAL+AVTAIELY  KYLLCN
Subjt:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

XP_022157182.1 uncharacterized protein LOC111023958 [Momordica charantia]3.8e-6172.73Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL
        MALGEL+R FEELK INEKQESRVRY+ETKVQNIV GYLI+   FFF +SQTSS   C DWWV+LA++LLC+F+YFLLFLDAV MLF TQYQLD++C+EL
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL

Query:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
         ++ QQILV KNQ DVGL ME GES   F+F FHEK+LMLD  RI GRKVY+ FTV ALLAVTAIELY  KY+LCN
Subjt:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

TrEMBL top hitse value%identityAlignment
A0A0A0KJZ3 Uncharacterized protein5.4e-4558.79Show/hide
Query:  SIVMA-LGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLM
        SI MA LG+L++NF  LK IN+ QE+ +RY ETK+QNIV+GYL WG  FFF  S +    KC DWWVVL++ LL  F+Y LLF+DAV ML  T  QL ++
Subjt:  SIVMA-LGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLM

Query:  CEELTQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIA--GRKVYMCFTVCALLAVTAIELYACKYLLCN
         +ELT+ICQQILV +NQ  V L ME GE CD F+ SFHE++ MLD   +   GRK Y+ F VCALL +TAIELYACK LLCN
Subjt:  CEELTQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIA--GRKVYMCFTVCALLAVTAIELYACKYLLCN

A0A5A7TMJ1 WD repeat-containing protein 91-like protein3.4e-4760.8Show/hide
Query:  LGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEELTQ
        LG+L+RNF  LK IN+ QE+ +RY ETK+QN+V+GYL WG  FFF VS +    KC DWWV+LA+ L   F YFLLF+DAV ML  T  QLD++ +EL +
Subjt:  LGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEELTQ

Query:  ICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRI--AGRKVYMCFTVCALLAVTAIELYACKYLLCN
        ICQQILV +NQ +VGL MEAGE  D F+ SFHE++ MLD  R+   GRKVY+ F VC LLA+TAIELYACK LLCN
Subjt:  ICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRI--AGRKVYMCFTVCALLAVTAIELYACKYLLCN

A0A6J1DS87 uncharacterized protein LOC1110239273.9e-5162.92Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEE
        M  GELKRNFE LK + EKQESRV+YHE++ QNI + YLIWG  FFFA+SQT SS LKC DWW+VL +++ CAFVYFL FL+AVTML+  Q+Q+D++C+E
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQT-SSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEE

Query:  LTQICQQILVVKNQ-GDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
          +ICQQILV ++Q  DV L MEAG+S D F FSFH K+L     RI  RK Y+C TV ALLAVTAIELYAC +L C+
Subjt:  LTQICQQILVVKNQ-GDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

A0A6J1DSQ0 uncharacterized protein LOC1110239581.8e-6172.73Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL
        MALGEL+R FEELK INEKQESRVRY+ETKVQNIV GYLI+   FFF +SQTSS   C DWWV+LA++LLC+F+YFLLFLDAV MLF TQYQLD++C+EL
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL

Query:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
         ++ QQILV KNQ DVGL ME GES   F+F FHEK+LMLD  RI GRKVY+ FTV ALLAVTAIELY  KY+LCN
Subjt:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

A0A6J1DX74 uncharacterized protein LOC111023953 isoform X28.9e-5667.05Show/hide
Query:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL
        MA+GEL+R F ELK INEKQESRVRYHE K Q IV GYLI    FFF +SQTSS  KC+DWWV+L+++LLC+FVYFLLFLDA T L+ T+ QLD++C+EL
Subjt:  MALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEEL

Query:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN
         ++CQQILV +NQ DV L ME G+  D F+F FHEK+L+LD  R  GRKVY+ FTVCAL+AVTAIELY  KYLLCN
Subjt:  TQICQQILVVKNQGDVGL-MEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCCATAGTCATGGCACTTGGAGAGCTGAAGAGGAATTTTGAGGAGTTGAAAGTTATTAACGAGAAGCAAGAATCTAGGGTGCGTTACCATGAAACCAAAGTGCAGAACAT
TGTAATTGGTTACCTCATTTGGGGATGCTCCTTCTTCTTTGCTGTCTCTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTTGTTTTGGCTATGAATCTGTTGT
GTGCCTTTGTCTACTTTTTGCTTTTTCTGGATGCTGTCACTATGTTATTTTGGACCCAATACCAGCTAGACTTAATGTGCGAGGAATTAACTCAAATTTGCCAACAAATT
TTGGTAGTCAAAAACCAAGGTGATGTGGGTTTAATGGAGGCTGGAGAATCATGTGATGCATTTGATTTCAGTTTCCATGAGAAGATACTCATGCTTGATCCTTGTAGAAT
TGCTGGGAGGAAAGTTTACATGTGCTTCACTGTCTGTGCTCTGCTTGCTGTTACTGCTATTGAATTATATGCTTGCAAGTACTTGTTATGCAAC
mRNA sequenceShow/hide mRNA sequence
TCCATAGTCATGGCACTTGGAGAGCTGAAGAGGAATTTTGAGGAGTTGAAAGTTATTAACGAGAAGCAAGAATCTAGGGTGCGTTACCATGAAACCAAAGTGCAGAACAT
TGTAATTGGTTACCTCATTTGGGGATGCTCCTTCTTCTTTGCTGTCTCTCAGACTTCTTCATTCCTCAAGTGCAATGATTGGTGGGTTGTTTTGGCTATGAATCTGTTGT
GTGCCTTTGTCTACTTTTTGCTTTTTCTGGATGCTGTCACTATGTTATTTTGGACCCAATACCAGCTAGACTTAATGTGCGAGGAATTAACTCAAATTTGCCAACAAATT
TTGGTAGTCAAAAACCAAGGTGATGTGGGTTTAATGGAGGCTGGAGAATCATGTGATGCATTTGATTTCAGTTTCCATGAGAAGATACTCATGCTTGATCCTTGTAGAAT
TGCTGGGAGGAAAGTTTACATGTGCTTCACTGTCTGTGCTCTGCTTGCTGTTACTGCTATTGAATTATATGCTTGCAAGTACTTGTTATGCAAC
Protein sequenceShow/hide protein sequence
SIVMALGELKRNFEELKVINEKQESRVRYHETKVQNIVIGYLIWGCSFFFAVSQTSSFLKCNDWWVVLAMNLLCAFVYFLLFLDAVTMLFWTQYQLDLMCEELTQICQQI
LVVKNQGDVGLMEAGESCDAFDFSFHEKILMLDPCRIAGRKVYMCFTVCALLAVTAIELYACKYLLCN