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MS006246 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006246
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold96:1520845..1520982
RNA-Seq ExpressionMS006246
SyntenyMS006246
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN64513.1 hypothetical protein VITISV_004352 [Vitis vinifera]3.8e-0584.85Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAK
        ECVP+S GKEVEET QSQ NRLRS+GAIPTAAK
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAK
KAB1227959.1 hypothetical protein CJ030_MR1G013839 [Morella rubra]5.9e-0681.58Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECV +S GKEVEET QSQ NR RSQGAIPTAAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
KAB1227962.1 hypothetical protein CJ030_MR1G013842 [Morella rubra]5.9e-0681.58Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECV +S GKEVEET QSQ NR RSQGAIPTAAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
TrEMBL top hitse value%identityAlignment
A0A4U5PZK3 Uncharacterized protein7.8e-0476.32Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECVP+S  KEVEET  +Q NRLRSQ AIPTAAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
A0A6A1WRP5 PMD domain-containing protein2.8e-0681.58Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECV +S GKEVEET QSQ NR RSQGAIPTAAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
A0A6A1WRS3 Uncharacterized protein2.8e-0681.58Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECV +S GKEVEET QSQ NR RSQGAIPTAAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
A5AFS6 Uncharacterized protein1.8e-0584.85Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAK
        ECVP+S GKEVEET QSQ NRLRS+GAIPTAAK
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAK
F6H890 Uncharacterized protein1.7e-0678.95Show/hide
Query:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
        ECVP+S GKEVEE  QSQ NRLRS+GAIP AAK SWSR
Subjt:  ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAATGTGTTCCGAAGTCCACAGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGTCGAACCGACTAAGATCACAGGGAGCGATCCCCACAGCCGCTAAAAGTAGCTGGAG
CCGAGGAGGCGTGGGCCACAGGTCGCAA
mRNA sequenceShow/hide mRNA sequence
GAATGTGTTCCGAAGTCCACAGGTAAAGAAGTTGAAGAGACGGTTCAGTCGCAGTCGAACCGACTAAGATCACAGGGAGCGATCCCCACAGCCGCTAAAAGTAGCTGGAG
CCGAGGAGGCGTGGGCCACAGGTCGCAA
Protein sequenceShow/hide protein sequence
ECVPKSTGKEVEETVQSQSNRLRSQGAIPTAAKSSWSRGGVGHRSQ