; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006248 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006248
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA-binding protein pno1-like
Genome locationscaffold96:1557515..1558186
RNA-Seq ExpressionMS006248
SyntenyMS006248
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR004087 - K Homology domain
IPR036612 - K Homology domain, type 1 superfamily
IPR039912 - Pre-rRNA-processing protein PNO1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042585.1 RNA-binding protein pno1-like [Cucumis melo var. makuwa]1.4e-11394.64Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_004145908.1 RNA-binding protein pno1 [Cucumis sativus]1.7e-11495.09Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_008437547.1 PREDICTED: RNA-binding protein pno1-like [Cucumis melo]1.4e-11394.64Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_022157181.1 RNA-binding protein pno1-like [Momordica charantia]2.1e-11799.11Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEAPTSMEVEA+STKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

XP_038874451.1 RNA-binding protein pno1-like [Benincasa hispida]4.9e-11495.54Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVEAVS+K  TEVGTLPPKP+FDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKID+RMNLKARKVELKTRADTPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

TrEMBL top hitse value%identityAlignment
A0A0A0KQC5 KH domain-containing protein8.1e-11595.09Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TE+GTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRADTPD+S
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A1S3AUA6 RNA-binding protein pno1-like6.9e-11494.64Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A5D3C450 RNA-binding protein pno1-like6.9e-11494.64Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVE VS+K +TEVGT+PPKPQF+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+Y+QMKIDIRMNLKARKVELKTRA+TPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFD+IDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1DX80 RNA-binding protein pno1-like1.0e-11799.11Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTEAPTSMEVEA+STKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTR DTPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

A0A6J1K1S8 RNA-binding protein pno1-like2.0e-11395.98Show/hide
Query:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS
        MQSTE P SMEVEAV +K ITEVG LPPKP F+PLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTP+YEQMKIDIRMNLKARKVELKTRADTPDIS
Subjt:  MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDIS

Query:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
        NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL
Subjt:  NLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSL

Query:  ILGSPAGKVYSKLRAVTARLAERF
        ILGSPAGKVYSKLRAVTARLAERF
Subjt:  ILGSPAGKVYSKLRAVTARLAERF

SwissProt top hitse value%identityAlignment
A7RP64 RNA-binding protein pno13.3e-6560.71Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD
        +P F P+K  ++  G+ + RK+ VP HRY+PLK+ WM+I+TPV E +K+ IR NL +R VE++   +T DI  +QK ADFV AF+LGF++ DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFEI DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+A+TKIHILGSF NIKIAR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q29IG6 RNA-binding protein pno14.4e-6567.42Show/hide
Query:  QFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRG
        + RKVSVPPHRYS LK+ WM+I+TPV E MK+ IR N+KAR+VEL+   +TPDI+NLQK ADFV AF+ GF++ DA+ALLR+++L+VE+FEIKDVKTLRG
Subjt:  QFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRG

Query:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        +H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LR+V +RL+ER
Subjt:  EHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Q5F414 RNA-binding protein PNO11.1e-6359.69Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD
        +P F PL    +  G+ + RKV VP +RY+PLK+ WM+I+TP+ E +++ IR NLK R VE+KT ++T D+S L K ADFV AF+LGF + DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        +L++ESFE+ DVK L+G+HLSRAIGR++GK GKTKF IEN T+TRIV+AD+KIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q6VBQ6 RNA-binding protein PNO11.8e-6359.18Show/hide
Query:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD
        +P F P+   ++  G  + RKV+VP HRY+PLK+ W++I+TP+ E +++ +R NLK R VE+KT  +T DI+ L K ADF+ AF+LGF + DA+AL+R+D
Subjt:  KPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVD

Query:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF
        EL++ESF++ DVK L+G+HLSRAIGR++GK GKTKF IEN TKTRIV+ADTKIHILGSF NIK+AR ++C+LILGSP  KVY  +RAV +R AERF
Subjt:  ELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAERF

Q9VR89 RNA-binding protein pno13.9e-6665.78Show/hide
Query:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFE
        P +    R + RKVSVPPHRYS LK+ WM+I+TPV E MK+ IR N+KAR+VEL+   +TPDI+NLQ+ ADFV AF+ GF++ DA+ALLR+++L+VESFE
Subjt:  PHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVHAFMLGFDIIDAIALLRVDELYVESFE

Query:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER
        IKDVKTLRG+H SRAIGRL+GK G+TKF IEN TKTRIV+AD+KIHILGS+ NI++AR ++C+LILGSP  KVY  LRAV +RL+ER
Subjt:  IKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARLAER

Arabidopsis top hitse value%identityAlignment
AT3G13230.1 RNA-binding KH domain-containing protein5.4e-9580.47Show/hide
Query:  TSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCAD
        T MEVE  +   +     LPPKP F PLK HEM+DG+VQFRK++VPP+RYSPLKKAW++IYTP+Y+QMK+DIRMNLKARKVELKTRADTPDISNLQK AD
Subjt:  TSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCAD

Query:  FVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAG
        FVHAFMLGFDI DAI+LLR+DELYVESFEIKDVKTL+GEHLSRAIGRLSGK GKTKFAIEN+TKTRIVIADT+IHILG+F+NIK+AR SLCSLI+GSPAG
Subjt:  FVHAFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAG

Query:  KVYSKLRAVTARLAE
        KVYSKLR+V+ARL E
Subjt:  KVYSKLRAVTARLAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCTACTGAAGCCCCCACTTCCATGGAAGTAGAAGCCGTGTCAACTAAACCGATAACCGAAGTTGGCACCTTGCCACCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGCCGAGTTCAGTTCCGGAAGGTGTCTGTTCCTCCGCATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAGTATATGAGC
AGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACCAGAGCAGACACACCCGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTCCAT
GCCTTCATGCTCGGTTTTGACATAATCGATGCAATTGCACTCTTACGAGTTGATGAACTCTACGTCGAATCTTTTGAGATTAAGGATGTTAAAACACTTCGAGGTGAACA
CTTATCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCGATTGAAAATGCTACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATAT
TAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCCCCTGCAGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCTGAAAGGTTT
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCTACTGAAGCCCCCACTTCCATGGAAGTAGAAGCCGTGTCAACTAAACCGATAACCGAAGTTGGCACCTTGCCACCAAAACCACAGTTTGATCCTCTAAAGCC
TCATGAGATGAATGATGGCCGAGTTCAGTTCCGGAAGGTGTCTGTTCCTCCGCATCGCTATTCTCCTCTCAAGAAAGCATGGATGGAGATTTACACCCCAGTATATGAGC
AGATGAAAATTGACATCCGTATGAACCTCAAGGCTCGTAAAGTTGAACTGAAAACCAGAGCAGACACACCCGACATCAGTAACTTGCAAAAGTGTGCAGATTTTGTCCAT
GCCTTCATGCTCGGTTTTGACATAATCGATGCAATTGCACTCTTACGAGTTGATGAACTCTACGTCGAATCTTTTGAGATTAAGGATGTTAAAACACTTCGAGGTGAACA
CTTATCTCGTGCCATAGGCAGATTGTCTGGTAAAGCTGGTAAAACAAAGTTTGCGATTGAAAATGCTACAAAGACGAGGATAGTTATTGCAGACACCAAGATTCACATAT
TAGGATCCTTTGCCAACATCAAGATTGCTAGAGATTCTCTTTGCAGCCTCATTTTAGGTTCCCCTGCAGGAAAAGTTTATTCAAAACTAAGAGCAGTTACAGCCAGATTG
GCTGAAAGGTTT
Protein sequenceShow/hide protein sequence
MQSTEAPTSMEVEAVSTKPITEVGTLPPKPQFDPLKPHEMNDGRVQFRKVSVPPHRYSPLKKAWMEIYTPVYEQMKIDIRMNLKARKVELKTRADTPDISNLQKCADFVH
AFMLGFDIIDAIALLRVDELYVESFEIKDVKTLRGEHLSRAIGRLSGKAGKTKFAIENATKTRIVIADTKIHILGSFANIKIARDSLCSLILGSPAGKVYSKLRAVTARL
AERF