CuGenDBv2

Gene ID	MS006266
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	late embryogenesis abundant protein At1g64065
Genome location	scaffold96:1717186..1717821
RNA-Seq Expression	MS006266
Synteny	MS006266
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022145906.1 late embryogenesis abundant protein At1g64065 [Momordica charantia]

5.9e-101

97.55

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAAQETSGDR ATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPF+DATLIAEVTIENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
        NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLK MNMSCIAEFEGRV LLKLFKEMKVSLLKCTMTLNF+SHAIHN
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

XP_022929131.1 late embryogenesis abundant protein At1g64065 [Cucurbita moschata]

4.2e-75

74.51

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA E   DR ATLRSRR+ASE+CIN  CIYLFA AA AC+A LILGL VVRVKTPT KL+SV VKNL YGFSP PFMDATLIAE+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
         T+ + IYYGVA GIGEVK VSVNAK  K+ +F V+VK N+S  DVDY S+DLA LKTMNMSCIAEF+GRV LLKLFKE KVS+LKCTM+LN  SH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

XP_022970100.1 late embryogenesis abundant protein At1g64065 [Cucurbita maxima]

4.2e-75

74.51

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA E   DR ATLRSRR+ASE+CIN  CIYLFA AA AC+A LILGL VVRVKTPT KL+SV VKNL YGFSP PFMDATLIAE+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
         T+ + IYYGVA GIGEVK VSVNAK  K  +F+V+VK N+S  DVDY S+DLA LKTMNMSCIAEF+GRV LLKLFKE KVS+LKCTM+LN +SH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

XP_023550526.1 late embryogenesis abundant protein At1g64065 [Cucurbita pepo subsp. pepo]

5.5e-75

74.02

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA +   DR ATLRSRR+ASE+CIN  CIYLFA AA AC+A LILGL VVRVKTPT KL+SV VKNL YGFSP PFMDATLIAE+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
         T+ + IYYGVA GIGEVK VSVNAK  K+ +F+V+VK N+S  DVDY S+DLA LKTMNMSCIAEF+GRV LLKLFKE KVS+LKCTM+LN +SH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

XP_038874293.1 late embryogenesis abundant protein At1g64065-like [Benincasa hispida]

4.1e-62

62.56

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MA  +   DR   LR  R A  +C++  CI+LF  A+AAC+  L L L V+RVK PT KL+ VAVK+L YGFSP PFM+ATLI E+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
          + + IY GV  GIGEVKRVSVNAK +++T+F+V+V+ N+S  DVDY SYDLA LKTMNMSCIA+FEGR HLLKLFK  K+S+LKC+M+LN TSH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LAC
        LAC
Subjt:  LAC

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AUE7 late embryogenesis abundant protein At1g64065

2.9e-61

61.58

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA +  GDR    RSRR++S++C+NA CI LFA AA AC+A L  GL V+RVKTPT KL+SVAVKNL YGFSP PFM+ATL  E+T+ENPN+G F+YE 
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
          + + IYYGV  GIGEVKR+SVNAK +++  F V+VK N    +VDY S DLA LKTMNMS  AEFEG+++LLKLFKE K+S++KC+ +LN TSH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LAC
        LAC
Subjt:  LAC

A0A5A7TMT1 Late embryogenesis abundant protein

2.9e-61

61.58

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA +  GDR    RSRR++S++C+NA CI LFA AA AC+A L  GL V+RVKTPT KL+SVAVKNL YGFSP PFM+ATL  E+T+ENPN+G F+YE 
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
          + + IYYGV  GIGEVKR+SVNAK +++  F V+VK N    +VDY S DLA LKTMNMS  AEFEG+++LLKLFKE K+S++KC+ +LN TSH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LAC
        LAC
Subjt:  LAC

A0A6J1CXS7 late embryogenesis abundant protein At1g64065

2.8e-101

97.55

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAAQETSGDR ATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPF+DATLIAEVTIENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
        NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLK MNMSCIAEFEGRV LLKLFKEMKVSLLKCTMTLNF+SHAIHN
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

A0A6J1EM85 late embryogenesis abundant protein At1g64065

2.1e-75

74.51

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA E   DR ATLRSRR+ASE+CIN  CIYLFA AA AC+A LILGL VVRVKTPT KL+SV VKNL YGFSP PFMDATLIAE+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
         T+ + IYYGVA GIGEVK VSVNAK  K+ +F V+VK N+S  DVDY S+DLA LKTMNMSCIAEF+GRV LLKLFKE KVS+LKCTM+LN  SH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

A0A6J1I1W2 late embryogenesis abundant protein At1g64065

2.1e-75

74.51

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Query:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE
        MAA E   DR ATLRSRR+ASE+CIN  CIYLFA AA AC+A LILGL VVRVKTPT KL+SV VKNL YGFSP PFMDATLIAE+T+ENPNFGEFKYEE
Subjt:  MAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEE

Query:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN
         T+ + IYYGVA GIGEVK VSVNAK  K  +F+V+VK N+S  DVDY S+DLA LKTMNMSCIAEF+GRV LLKLFKE KVS+LKCTM+LN +SH + N
Subjt:  NTDASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHN

Query:  LACQ
        LACQ
Subjt:  LACQ

SwissProt top hits

e value

%identity

Alignment

Q6DST1 Late embryogenesis abundant protein At1g64065

4.1e-12

31.16

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Query:  PSQPESMAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL-SYGFSPNPFMDATLIAEVTIENPNF
        P++    + +E SG R       RR +E     C +Y            LIL    +R+  P  +  S++ ++L S G S NP+ +ATL+++++I N NF
Subjt:  PSQPESMAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL-SYGFSPNPFMDATLIAEVTIENPNF

Query:  GEFKYEENTDASFIYYGVAAGIGEVK----RVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTM
        G F++E++T    + Y     +GE K    RV  + K V+ T   VE+  +  + D   +  DL  L  + +  +AE  GR+ +L   K  KVS++ CTM
Subjt:  GEFKYEENTDASFIYYGVAAGIGEVK----RVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTM

Query:  TLNFTSHAIHNLACQ
         LN T   I NL C+
Subjt:  TLNFTSHAIHNLACQ

Arabidopsis top hits

e value

%identity

Alignment

AT1G64065.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

2.9e-13

31.16

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Query:  PSQPESMAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL-SYGFSPNPFMDATLIAEVTIENPNF
        P++    + +E SG R       RR +E     C +Y            LIL    +R+  P  +  S++ ++L S G S NP+ +ATL+++++I N NF
Subjt:  PSQPESMAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNL-SYGFSPNPFMDATLIAEVTIENPNF

Query:  GEFKYEENTDASFIYYGVAAGIGEVK----RVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTM
        G F++E++T    + Y     +GE K    RV  + K V+ T   VE+  +  + D   +  DL  L  + +  +AE  GR+ +L   K  KVS++ CTM
Subjt:  GEFKYEENTDASFIYYGVAAGIGEVK----RVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTM

Query:  TLNFTSHAIHNLACQ
         LN T   I NL C+
Subjt:  TLNFTSHAIHNLACQ

AT2G44000.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

5.1e-10

30.17

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Query:  IYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSY----GFSPNPFMDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKRVSVNA
        I++ AG        +++G   +  K  TA L+SV V+NL Y      S + + +ATL  E+ IENPN G F++   +    +Y G   G   +    V +
Subjt:  IYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSY----GFSPNPFMDATLIAEVTIENPNFGEFKYEENTDASFIYYGVAAGIGEVKRVSVNA

Query:  KGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHNLACQ
         G  RT  S EV    +     ++  D+   + + +   A+  G VHL  L K  +   LKC M LN +   IH L C+
Subjt:  KGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHNLACQ

Sequences

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CDS sequence

Show/hide CDS sequence

CAGCCCCCTTCCCAGCCGGAATCAATGGCGGCACAAGAAACTTCCGGCGACCGGGCGGCCACGCTCAGATCAAGGCGCAGAGCATCAGAGCGCTGCATCAACGCCTGCTG
CATTTACCTCTTCGCCGGCGCCGCTGCGGCATGCGTCGCCGTCCTCATCCTCGGCCTCACCGTGGTCCGCGTGAAAACCCCCACCGCAAAATTAAGCTCCGTCGCGGTAA
AAAATCTGAGCTACGGCTTCTCCCCAAACCCTTTCATGGACGCCACATTAATCGCCGAGGTAACCATAGAAAATCCGAATTTCGGAGAATTCAAGTACGAGGAAAACACG
GACGCCAGCTTCATTTACTACGGCGTGGCGGCGGGAATCGGCGAGGTGAAACGGGTGTCCGTAAATGCAAAGGGCGTGAAGAGGACGAGCTTTAGTGTGGAAGTGAAAAC
AAATGCGAGCGTTGCTGACGTGGATTACATGAGCTACGATTTAGCGAGTCTGAAGACGATGAATATGAGCTGCATCGCCGAGTTTGAAGGGAGGGTCCATTTGTTGAAAT
TGTTTAAGGAGATGAAAGTTTCTTTGTTGAAATGTACCATGACTCTCAACTTCACCTCCCATGCCATCCACAATCTTGCTTGCCAA

mRNA sequence

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Protein sequence

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QPPSQPESMAAQETSGDRAATLRSRRRASERCINACCIYLFAGAAAACVAVLILGLTVVRVKTPTAKLSSVAVKNLSYGFSPNPFMDATLIAEVTIENPNFGEFKYEENT
DASFIYYGVAAGIGEVKRVSVNAKGVKRTSFSVEVKTNASVADVDYMSYDLASLKTMNMSCIAEFEGRVHLLKLFKEMKVSLLKCTMTLNFTSHAIHNLACQ

MS006266 (gene) of Bitter gourd (TR) v1 genome