CuGenDBv2

Gene ID	MS006288
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	NAD(P)H-quinone oxidoreductase subunit H, chloroplastic
Genome location	scaffold247:213029..213235
RNA-Seq Expression	MS006288
Synteny	MS006288
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function) GO:0051287 - NAD binding (molecular function)
InterPro domains	IPR001135 - NADH-quinone oxidoreductase, subunit D IPR022885 - NAD(P)H-quinone oxidoreductase subunit D/H IPR029014 - [NiFe]-hydrogenase, large subunit

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009236333.1 NADH-plastoquinone oxidoreductase subunit 7 [Gynostemma pentaphyllum]

1.0e-25

88.41

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDRER PEWNDF+ RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

YP_009456118.1 NADH dehydrogenase subunit 7 [Momordica charantia]

6.9e-27

91.3

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDRERSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

YP_009674447.1 NADH dehydrogenase subunit 7 [Siraitia grosvenorii]

5.9e-26

88.41

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTES+KIIQQALEGIP GPYENLEIRCFDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

YP_009752721.1 NADH dehydrogenase subunit H [Ampelosycios humblotii]

4.5e-26

89.86

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

YP_009752975.1 NADH dehydrogenase subunit H [Momordica sessilifolia]

6.9e-27

91.3

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDRERSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

TrEMBL top hits

e value

%identity

Alignment

A0A2I6C035 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.4e-27

91.3

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDRERSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

A0A515BLN0 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.8e-26

88.41

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTES+KIIQQALEGIP GPYENLEIRCFDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

A0A6C0UER3 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.8e-26

88.41

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTES+KIIQQALEGIP GPYENLEIRCFDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

A0A6H0ES80 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

2.2e-26

89.86

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

A0A6H0EW91 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

3.4e-27

91.3

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRLGEMTESIKIIQQALEGIP GPYENLEIRCFDRERSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

SwissProt top hits

e value

%identity

Alignment

B1A990 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

1.9e-27

84.06

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVR+ EMTESIKIIQQALEGIP GPYENLEIRCFDR++ PEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Q09WW2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.5e-28

86.96

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVR+GEMTESIKIIQQALEGIP GPYENLEIR FDRER+PEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Q2L953 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

8.5e-28

85.51

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVR+ EMTESIKIIQQALEGIP GPYENLEIRCFDRER PEWNDF+ RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Q2PMN8 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

5.5e-27

82.61

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVR+GEM ESIKIIQQALEGIP GPYENLEIRCFDRE+ PEWN+F+ RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Q4VZL2 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic

4.2e-27

85.51

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRL EMTES+KIIQQALEGIP GPYENLEIR FDR RSPEWNDFD RFISKKPSPTFEL  + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Arabidopsis top hits

e value

%identity

Alignment

ATCG01110.1 NAD(P)H dehydrogenase subunit H

9.7e-27

81.16

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Query:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL
        LARYLVRL EMTESIKIIQQALEG+P GPYENLE R FDR+R+PEWNDF+ RFISKKPSPTFEL+ + L
Subjt:  LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

Sequences

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CDS sequence

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TTAGCTCGTTATTTAGTCAGACTTGGTGAGATGACGGAATCCATAAAAATTATTCAACAAGCTTTGGAAGGAATTCCCAGGGGGCCCTATGAGAATTTAGAAATACGATG
TTTTGATCGAGAAAGGTCTCCGGAATGGAATGACTTTGACTGTCGATTCATTAGTAAAAAACCTTCTCCAACTTTTGAGTTGACATTTGAAACACTG

mRNA sequence

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Protein sequence

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LARYLVRLGEMTESIKIIQQALEGIPRGPYENLEIRCFDRERSPEWNDFDCRFISKKPSPTFELTFETL

MS006288 (gene) of Bitter gourd (TR) v1 genome