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MS006299 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006299
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold247:438485..438625
RNA-Seq ExpressionMS006299
SyntenyMS006299
Gene Ontology termsGO:0016310 - phosphorylation (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0016020 - membrane (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0004672 - protein kinase activity (molecular function)
GO:0140640 - catalytic activity, acting on a nucleic acid (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7832946.1 putative ribonuclease H-like domain, reverse transcriptase zinc-binding domain-containing protein [Senna tora]6.6e-0553.19Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        K++   KIK FLW+  + I+PV  NL  RGMDV+P CP+C   EESI
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
XP_019083273.1 PREDICTED: protein TIME FOR COFFEE-like [Camelina sativa]8.7e-0550Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEES
        K++  PKIK+FLWK +   IPV   L  RGM+++PIC IC + EE+
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEES
XP_019159987.1 PREDICTED: uncharacterized protein LOC109156589 [Ipomoea nil]3.3e-0448.94Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        K+K  PK K FLW+AV  I+P   NL  + ++V PICP+CC  +E+I
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
XP_031101846.1 uncharacterized protein LOC116005747 [Ipomoea triloba]3.5e-0648.94Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        ++K  PK++  LW+ ++N++PVR NLR +GM VS ICP+CC++ E+I
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
XP_031131841.1 uncharacterized protein LOC116033223 [Ipomoea triloba]8.7e-0551.06Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        K+K  PK K FLW+A++NI+P   NL NR +DVSP CP+C    E +
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
TrEMBL top hitse value%identityAlignment
A0A0A8ZJV0 zf-RVT domain-containing protein3.6e-0452.5Show/hide
Query:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEE
        PKIK FLW+   +I+P R+N+R RGMDV   CP+C   +E
Subjt:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEE
A0A1R3G1X7 Reverse transcriptase3.6e-0445.24Show/hide
Query:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        PKI+ F W+ + N++P++ NL+ RGMDV  +C +C + EES+
Subjt:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
A0A1R3IRQ9 Non-specific serine/threonine protein kinase3.6e-0445.24Show/hide
Query:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        PK+K FLW+   NI+P ++NL+ RG+ V  +CP+C  +E+S+
Subjt:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
A0A2I4EWZ9 uncharacterized protein LOC1089934602.7e-0448.94Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        K+K   KIKIF+W++ + I+P RVNL  R +  SP+CPIC I  E++
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
A0A484KZP7 Uncharacterized protein2.1e-0441.3Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEES
        K++  PK++ F+W+A+ +++PVR NLR R ++V+ +CP CC  +E+
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEES
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein2.6e-0746.81Show/hide
Query:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        K+  +PKIK FLW+ V   +     LR+R +D  PIC  CCI EE+I
Subjt:  KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
AT3G09510.1 Ribonuclease H-like superfamily protein4.6e-0442.86Show/hide
Query:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
        PK+K FLW+A+   +     L  RGM + P CP C    ESI
Subjt:  PKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.2e-0543.59Show/hide
Query:  IKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPIC
        +K SPKIK+ +WKA+ N +PV   L +R + + P C  C
Subjt:  IKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPIC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAATCAAACATTCCCCAAAAATAAAGATCTTCCTTTGGAAAGCAGTTCAAAATATTATCCCAGTTAGGGTCAATTTGAGAAACAGAGGCATGGATGTTTCCCCCATTTG
TCCTATTTGTTGTATTATGGAGGAATCTATC
mRNA sequenceShow/hide mRNA sequence
AAAATCAAACATTCCCCAAAAATAAAGATCTTCCTTTGGAAAGCAGTTCAAAATATTATCCCAGTTAGGGTCAATTTGAGAAACAGAGGCATGGATGTTTCCCCCATTTG
TCCTATTTGTTGTATTATGGAGGAATCTATC
Protein sequenceShow/hide protein sequence
KIKHSPKIKIFLWKAVQNIIPVRVNLRNRGMDVSPICPICCIMEESI