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MS006308 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006308
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description30S ribosomal protein S11, chloroplastic
Genome locationscaffold247:538426..538503
RNA-Seq ExpressionMS006308
SyntenyMS006308
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5D2N4W1 Uncharacterized protein7.5e-0492.31Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS SFAG+CGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
SwissProt top hitse value%identityAlignment
A4QJE8 30S ribosomal protein S11, chloroplastic1.7e-0588.46Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AG+CGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
A4QJN2 30S ribosomal protein S11, chloroplastic1.7e-0588.46Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AG+CGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
A4QKD8 30S ribosomal protein S11, chloroplastic1.7e-0588.46Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AG+CGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
B5LMQ6 30S ribosomal protein S11, chloroplastic7.7e-0692.31Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AGSCGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
P06587 30S ribosomal protein S11, chloroplastic7.7e-0692.31Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AGSCGFKGTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ
Arabidopsis top hitse value%identityAlignment
ATCG00750.1 ribosomal protein S112.7e-0684.62Show/hide
Query:  GRVISGSFAGSCGFKGTRRGTPFAAQ
        GRVIS S AG+CGF+GTRRGTPFAAQ
Subjt:  GRVISGSFAGSCGFKGTRRGTPFAAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCGGGTAATTTCTGGGTCCTTCGCCGGTAGTTGTGGATTCAAAGGTACAAGAAGAGGGACACCATTTGCCGCACAA
mRNA sequenceShow/hide mRNA sequence
GGTCGGGTAATTTCTGGGTCCTTCGCCGGTAGTTGTGGATTCAAAGGTACAAGAAGAGGGACACCATTTGCCGCACAA
Protein sequenceShow/hide protein sequence
GRVISGSFAGSCGFKGTRRGTPFAAQ