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MS006310 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006310
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF1162)
Genome locationscaffold247:545011..545385
RNA-Seq ExpressionMS006310
SyntenyMS006310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149963.1 uncharacterized protein LOC111018256 isoform X1 [Momordica charantia]2.0e-4697.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
XP_022149964.1 uncharacterized protein LOC111018256 isoform X2 [Momordica charantia]2.0e-4697.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
XP_022149965.1 uncharacterized protein LOC111018256 isoform X3 [Momordica charantia]2.0e-4697.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
XP_038879509.1 uncharacterized protein LOC120071354 isoform X1 [Benincasa hispida]3.3e-4189.8Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS
        M  T TQ+AVEKS VDDR+M KPRGWLNWLSLGMLGAGGTEDSSQFSGVISDD+VKDIYEATKFHP V SNVSAADEERICFCAIKIDIHQISATLLS
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS
XP_038879512.1 uncharacterized protein LOC120071354 isoform X4 [Benincasa hispida]3.3e-4189.8Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS
        M  T TQ+AVEKS VDDR+M KPRGWLNWLSLGMLGAGGTEDSSQFSGVISDD+VKDIYEATKFHP V SNVSAADEERICFCAIKIDIHQISATLLS
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS
TrEMBL top hitse value%identityAlignment
A0A6J1D861 uncharacterized protein LOC111018256 isoform X19.6e-4797.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
A0A6J1D8L0 uncharacterized protein LOC111018256 isoform X29.6e-4797.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
A0A6J1DA10 uncharacterized protein LOC111018256 isoform X39.6e-4797.98Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDS QFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLS+
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
A0A6J1JM44 uncharacterized protein LOC111485823 isoform X24.6e-4186.87Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MV T TQ+A EKSQVDDR+M KPRGWLNWLSLGMLGAGGTEDSSQF+GVISDD+VKDIYEATKFHP   S VSAADEERICFC+IKIDIHQISATLLSM
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
A0A6J1JMV4 uncharacterized protein LOC111485823 isoform X14.6e-4186.87Show/hide
Query:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
        MV T TQ+A EKSQVDDR+M KPRGWLNWLSLGMLGAGGTEDSSQF+GVISDD+VKDIYEATKFHP   S VSAADEERICFC+IKIDIHQISATLLSM
Subjt:  MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G24740.1 Protein of unknown function (DUF1162)9.3e-2658.89Show/hide
Query:  QSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATL
        QSA EK   DD ++ K RGWLNWLS GMLGAGGTEDSSQFSGV+SD++VKDI++ATKF+P   S  + +   +IC C+I++++ + SATL
Subjt:  QSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGCTACTGCTACACAATCAGCTGTTGAGAAGTCACAAGTCGATGATCGTTCAATGAGGAAACCTCGGGGATGGTTGAACTGGCTATCCCTTGGTATGTTAGGTGC
TGGGGGTACTGAAGATTCAAGTCAATTTTCTGGAGTCATTTCAGATGATATTGTCAAGGACATATATGAGGCAACCAAATTCCACCCTCAAGTTCCATCTAACGTCAGTG
CTGCTGATGAAGAAAGGATCTGTTTCTGTGCCATCAAAATTGACATTCATCAGATATCAGCAACTTTACTGAGCATGTATGAGTTC
mRNA sequenceShow/hide mRNA sequence
ATGGTAGCTACTGCTACACAATCAGCTGTTGAGAAGTCACAAGTCGATGATCGTTCAATGAGGAAACCTCGGGGATGGTTGAACTGGCTATCCCTTGGTATGTTAGGTGC
TGGGGGTACTGAAGATTCAAGTCAATTTTCTGGAGTCATTTCAGATGATATTGTCAAGGACATATATGAGGCAACCAAATTCCACCCTCAAGTTCCATCTAACGTCAGTG
CTGCTGATGAAGAAAGGATCTGTTTCTGTGCCATCAAAATTGACATTCATCAGATATCAGCAACTTTACTGAGCATGTATGAGTTC
Protein sequenceShow/hide protein sequence
MVATATQSAVEKSQVDDRSMRKPRGWLNWLSLGMLGAGGTEDSSQFSGVISDDIVKDIYEATKFHPQVPSNVSAADEERICFCAIKIDIHQISATLLSMYEF