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MS006317 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006317
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionER membrane protein complex subunit 10
Genome locationscaffold247:677319..677694
RNA-Seq ExpressionMS006317
SyntenyMS006317
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038205.1 ER membrane protein complex subunit 10 [Cucumis melo var. makuwa]3.3e-3593.02Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFA+DILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

XP_008443658.1 PREDICTED: ER membrane protein complex subunit 10 [Cucumis melo]3.3e-3593.02Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFA+DILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

XP_011660199.1 ER membrane protein complex subunit 10 [Cucumis sativus]3.3e-3593.02Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFA+DILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

XP_022150006.1 ER membrane protein complex subunit 10 [Momordica charantia]1.1e-38100Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

XP_038879061.1 ER membrane protein complex subunit 10 [Benincasa hispida]1.6e-3490.7Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFADDILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQ QPQQS  A+QRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

TrEMBL top hitse value%identityAlignment
A0A1S3B9A8 ER membrane protein complex subunit 101.6e-3593.02Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFA+DILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

A0A5A7T9U1 ER membrane protein complex subunit 101.6e-3593.02Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFA+DILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ  GQAAGQAQPQQS AAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

A0A6J1DA53 ER membrane protein complex subunit 105.3e-39100Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
        RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR

A0A6J1HB50 ER membrane protein complex subunit 101.8e-3489.77Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAA--GQAQPQQSTAAVQRGPGSSAVRRR
        RTP+FADDILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ GGQAA  GQAQPQQS AA+QRGPGSS VRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAA--GQAQPQQSTAAVQRGPGSSAVRRR

A0A6J1JBS8 ER membrane protein complex subunit 101.8e-3489.77Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAA--GQAQPQQSTAAVQRGPGSSAVRRR
        RTP+FADDILVGE GEGE VKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQ GGQAA  GQAQPQQS AA+QRGPGSS VRRR
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAA--GQAQPQQSTAAVQRGPGSSAVRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G65270.1 unknown protein7.6e-2272.06Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE AGGQA G Q QP
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP

AT1G65270.2 unknown protein7.6e-2272.06Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE AGGQA G Q QP
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP

AT1G65270.3 unknown protein7.6e-2272.06Show/hide
Query:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP
        RTP+F ++IL  E  EGE   PPE+SFWAKYWMYLIPLGL+VMNA+TQA NMAEE AGGQA G Q QP
Subjt:  RTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAG-QAQP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTCAAGTTTATATTCAATGGTTTCCACAGAACTCCTGTATTTGCTGATGACATTCTTGTTGGTGAGGCTGGAGAAGGGGAAGATGTAAAGCCACCTGAAAAGTCCTTTTG
GGCAAAATATTGGATGTACCTGATACCCCTTGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGCTGGTGGCCAAGCAGCTGGACAGG
CACAGCCACAACAGTCAACCGCTGCAGTACAGCGCGGACCGGGTTCTTCCGCTGTTAGACGACGA
mRNA sequenceShow/hide mRNA sequence
CTCAAGTTTATATTCAATGGTTTCCACAGAACTCCTGTATTTGCTGATGACATTCTTGTTGGTGAGGCTGGAGAAGGGGAAGATGTAAAGCCACCTGAAAAGTCCTTTTG
GGCAAAATATTGGATGTACCTGATACCCCTTGGACTGATTGTTATGAATGCCATAACACAAGCAATGAACATGGCTGAAGAACAGGCTGGTGGCCAAGCAGCTGGACAGG
CACAGCCACAACAGTCAACCGCTGCAGTACAGCGCGGACCGGGTTCTTCCGCTGTTAGACGACGA
Protein sequenceShow/hide protein sequence
LKFIFNGFHRTPVFADDILVGEAGEGEDVKPPEKSFWAKYWMYLIPLGLIVMNAITQAMNMAEEQAGGQAAGQAQPQQSTAAVQRGPGSSAVRRR