; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006324 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006324
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like
Genome locationscaffold123_1:28534..29133
RNA-Seq ExpressionMS006324
SyntenyMS006324
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]1.4e-6464.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS+ NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]2.4e-6464.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS  NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

XP_008459618.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]2.4e-6464.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS  NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]6.1e-10898.5Show/hide
Query:  SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN
        SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN
Subjt:  SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN

Query:  EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIE   EDCEDDADYKGIRMFSGCPNLKSLVL
Subjt:  EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]2.9e-6564.65Show/hide
Query:  IEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSL--NACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDE
        +EDRISLLPD LL HILS +NTK VVQTCVLSKRWKTLWT IPTLNF++ SY     S   N   +K+ SFK FIFR+LS+ C T I KL+YT+S NEDE
Subjt:  IEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSL--NACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDE

Query:  VVLVELLICFARRHNVRELYLDTY-YISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        +VLVE LIC+A   NV++L ++TY  I +YDW YC S CSSL  LKMVC FV DWGVL +PSL+ILEIEC+W + + +A+YKGI MF GCPNL+SLVL
Subjt:  VVLVELLICFARRHNVRELYLDTY-YISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

TrEMBL top hitse value%identityAlignment
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X11.2e-6464.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS  NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

A0A1S3CBU6 F-box/LRR-repeat protein At3g26922-like isoform X21.2e-6464.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS  NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

A0A5A7TCF1 F-box/LRR-repeat protein6.9e-6564.62Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        +DRISLLPD LL HILS+ NTK VVQTC+LSKRWKTLWT IPTLNF++ S+      + +   SK+ SFK FIFR+LS+ C T IQKL+YTSS N DE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEP-SLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        LVELLIC+A  HNV++L ++TY I +Y+W YC   CSSL  LKMVCGFV DWGVL LPSL+ILEI+C+W   ++ A+Y GI MFSGCPNL+SLVL
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568201.3e-5058.42Show/hide
Query:  KKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRS--KQSSFKNFIFRILSERCRTKIQKLSYTSSG
        KKK   DRISLLPD LL  ILS +NT+QVVQTCVLSKRWKTLWT IPTLNF+F SYPF++   N+  S  K+ SF+ FI R+LSE     I  L+++ S 
Subjt:  KKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRS--KQSSFKNFIFRILSERCRTKIQKLSYTSSG

Query:  NEDEVV-LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSL
        + D+ V L+E LIC+A  H V+EL + TY    Y+W   LS CSSL VLK+ CGFV D G L   SLRILEIEC+W D   D  Y  I MFSGCPNL+SL
Subjt:  NEDEVV-LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSL

Query:  VL
        VL
Subjt:  VL

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like3.0e-10898.5Show/hide
Query:  SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN
        SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN
Subjt:  SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGN

Query:  EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
        EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIE   EDCEDDADYKGIRMFSGCPNLKSLVL
Subjt:  EDEVVLVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

SwissProt top hitse value%identityAlignment
Q56XS8 F-box/FBD/LRR-repeat protein At1g137801.6e-1329.41Show/hide
Query:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLV
        DRIS LP+ L+  IL ++ TK  V+T VLS RWK LW ++P L+ N + +PF+        + +    +FI R L     +++QK     S   D+++  
Subjt:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLV

Query:  ELLICFARRHNVRELYLD--TYYISVYD---------WKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNL
           I  A    +R L ++  TYY    D             L +C +L  LK+    + D G + LP L+ + + E  W   +        ++ SGCP L
Subjt:  ELLICFARRHNVRELYLD--TYYISVYD---------WKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNL

Query:  KSLV
        + L+
Subjt:  KSLV

Q6NKX3 F-box/FBD/LRR-repeat protein At2g042306.3e-1532.5Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYP-FEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        EDRIS LPD LL  ILS++ T+  + T VLSKRW++LWT +P L F+    P F++ +++      + F   +++ LS      ++ L  +  G  D  +
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYP-FEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYY---ISVYDWKYCLSACSSLTVLKMVCGFVADW-GVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNLKSLVL
         V + I  A    VR+L LD++Y    +V       S   SL +LK+ C    D+   + L SLR L + + +++D E   +     +  GCP+L+ LV+
Subjt:  LVELLICFARRHNVRELYLDTYY---ISVYDWKYCLSACSSLTVLKMVCGFVADW-GVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNLKSLVL

Q8GW80 F-box/LRR-repeat protein At3g592103.5e-1332.99Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSY-TSSGNEDEVV
        +D I+ LPD LLC ILSN++TK+   T +LSKRW+ L+  +P L+F+    P   P +      Q+SF +F+ R+L  R +  I K S     G EDE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSY-TSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKM--VCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
           +L     RH V +L L      VY     + A  +L  LK+    G       + LP L+ L ++       ++      ++ SGCP L+ L L
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKM--VCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

Q93ZK9 F-box/FBD/LRR-repeat protein At5g187701.8e-1429.95Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL
        ED IS LPD LLCHIL  ++T + V T VLS RW+ LW  +P L+ N   +P+  P+   C +    F N          + +I + ++ S+ +  E  L
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL

Query:  VELLICFARRHNVRELYLDTYYISVY---DWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
          ++    ++ NVR   +++  +  +   + +  LSAC +L  LK+   ++ D+  L+LP L+I+ +    ED    +D     + S  P L+ L L
Subjt:  VELLICFARRHNVRELYLDTYYISVY---DWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

Q9FLA3 Putative FBD-associated F-box protein At5g449404.1e-1432.02Show/hide
Query:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIP-----TLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYT---SSG
        D IS  PDCLL  IL N+ TK  V+T VLSKRW+ LW ++P     T +F    YP+EE            F  F+ R +  +CR+++QK   T    +G
Subjt:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIP-----TLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYT---SSG

Query:  NEDEVVLVELLICFARRHNVRELYLDTYYISVYDW-KYCLSACSSLTVLKMV-CGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKS
          D   L+EL+     R  ++ LY+  +  +  D+ +  +    +L  LK+          V++LP L+IL++E  +    +D      ++ SGCP L+ 
Subjt:  NEDEVVLVELLICFARRHNVRELYLDTYYISVYDW-KYCLSACSSLTVLKMV-CGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKS

Query:  LVL
        L L
Subjt:  LVL

Arabidopsis top hitse value%identityAlignment
AT1G13780.1 F-box/RNI-like/FBD-like domains-containing protein1.1e-1429.41Show/hide
Query:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLV
        DRIS LP+ L+  IL ++ TK  V+T VLS RWK LW ++P L+ N + +PF+        + +    +FI R L     +++QK     S   D+++  
Subjt:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLV

Query:  ELLICFARRHNVRELYLD--TYYISVYD---------WKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNL
           I  A    +R L ++  TYY    D             L +C +L  LK+    + D G + LP L+ + + E  W   +        ++ SGCP L
Subjt:  ELLICFARRHNVRELYLD--TYYISVYD---------WKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNL

Query:  KSLV
        + L+
Subjt:  KSLV

AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein4.5e-1632.5Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYP-FEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV
        EDRIS LPD LL  ILS++ T+  + T VLSKRW++LWT +P L F+    P F++ +++      + F   +++ LS      ++ L  +  G  D  +
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYP-FEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYY---ISVYDWKYCLSACSSLTVLKMVCGFVADW-GVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNLKSLVL
         V + I  A    VR+L LD++Y    +V       S   SL +LK+ C    D+   + L SLR L + + +++D E   +     +  GCP+L+ LV+
Subjt:  LVELLICFARRHNVRELYLDTYY---ISVYDWKYCLSACSSLTVLKMVCGFVADW-GVLTLPSLRILEI-ECNWEDCEDDADYKGIRMFSGCPNLKSLVL

AT3G59210.1 F-box/RNI-like superfamily protein2.5e-1432.99Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSY-TSSGNEDEVV
        +D I+ LPD LLC ILSN++TK+   T +LSKRW+ L+  +P L+F+    P   P +      Q+SF +F+ R+L  R +  I K S     G EDE V
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSY-TSSGNEDEVV

Query:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKM--VCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
           +L     RH V +L L      VY     + A  +L  LK+    G       + LP L+ L ++       ++      ++ SGCP L+ L L
Subjt:  LVELLICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKM--VCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

AT5G18770.1 F-box/FBD-like domains containing protein1.3e-1529.95Show/hide
Query:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL
        ED IS LPD LLCHIL  ++T + V T VLS RW+ LW  +P L+ N   +P+  P+   C +    F N          + +I + ++ S+ +  E  L
Subjt:  EDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVL

Query:  VELLICFARRHNVRELYLDTYYISVY---DWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL
          ++    ++ NVR   +++  +  +   + +  LSAC +L  LK+   ++ D+  L+LP L+I+ +    ED    +D     + S  P L+ L L
Subjt:  VELLICFARRHNVRELYLDTYYISVY---DWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL

AT5G44940.1 F-box/RNI-like superfamily protein2.9e-1532.02Show/hide
Query:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIP-----TLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYT---SSG
        D IS  PDCLL  IL N+ TK  V+T VLSKRW+ LW ++P     T +F    YP+EE            F  F+ R +  +CR+++QK   T    +G
Subjt:  DRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIP-----TLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYT---SSG

Query:  NEDEVVLVELLICFARRHNVRELYLDTYYISVYDW-KYCLSACSSLTVLKMV-CGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKS
          D   L+EL+     R  ++ LY+  +  +  D+ +  +    +L  LK+          V++LP L+IL++E  +    +D      ++ SGCP L+ 
Subjt:  NEDEVVLVELLICFARRHNVRELYLDTYYISVYDW-KYCLSACSSLTVLKMV-CGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKS

Query:  LVL
        L L
Subjt:  LVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGAAAAAGAAGAAGATTGAAGACAGAATCAGCCTTCTCCCAGATTGTCTTCTTTGTCACATTCTCTCCAACATAAACACAAAACAAGTCGTCCAAACTTGTGTTCTCTC
AAAACGCTGGAAGACCCTTTGGACTAGTATCCCCACTCTCAACTTCAATTTCAAGTCCTACCCGTTTGAAGAGCCAAGTCTAAATGCTTGTAGATCGAAACAATCATCGT
TCAAGAATTTCATCTTCAGAATTCTATCCGAACGCTGTCGCACCAAAATTCAAAAATTGAGCTACACTTCCTCAGGAAATGAAGATGAAGTGGTTTTGGTTGAATTATTG
ATATGTTTTGCACGACGCCACAATGTTCGGGAACTTTACCTAGACACTTATTACATTAGTGTTTATGACTGGAAATATTGTTTGTCGGCGTGTTCATCACTGACTGTGCT
GAAGATGGTGTGTGGGTTTGTGGCTGACTGGGGAGTCTTGACTTTACCATCGTTGAGAATTTTAGAGATCGAATGTAATTGGGAAGATTGTGAGGATGATGCAGATTACA
AAGGAATTAGAATGTTCTCGGGCTGTCCAAACTTAAAATCTTTGGTTTTA
mRNA sequenceShow/hide mRNA sequence
TCGAAAAAGAAGAAGATTGAAGACAGAATCAGCCTTCTCCCAGATTGTCTTCTTTGTCACATTCTCTCCAACATAAACACAAAACAAGTCGTCCAAACTTGTGTTCTCTC
AAAACGCTGGAAGACCCTTTGGACTAGTATCCCCACTCTCAACTTCAATTTCAAGTCCTACCCGTTTGAAGAGCCAAGTCTAAATGCTTGTAGATCGAAACAATCATCGT
TCAAGAATTTCATCTTCAGAATTCTATCCGAACGCTGTCGCACCAAAATTCAAAAATTGAGCTACACTTCCTCAGGAAATGAAGATGAAGTGGTTTTGGTTGAATTATTG
ATATGTTTTGCACGACGCCACAATGTTCGGGAACTTTACCTAGACACTTATTACATTAGTGTTTATGACTGGAAATATTGTTTGTCGGCGTGTTCATCACTGACTGTGCT
GAAGATGGTGTGTGGGTTTGTGGCTGACTGGGGAGTCTTGACTTTACCATCGTTGAGAATTTTAGAGATCGAATGTAATTGGGAAGATTGTGAGGATGATGCAGATTACA
AAGGAATTAGAATGTTCTCGGGCTGTCCAAACTTAAAATCTTTGGTTTTA
Protein sequenceShow/hide protein sequence
SKKKKIEDRISLLPDCLLCHILSNINTKQVVQTCVLSKRWKTLWTSIPTLNFNFKSYPFEEPSLNACRSKQSSFKNFIFRILSERCRTKIQKLSYTSSGNEDEVVLVELL
ICFARRHNVRELYLDTYYISVYDWKYCLSACSSLTVLKMVCGFVADWGVLTLPSLRILEIECNWEDCEDDADYKGIRMFSGCPNLKSLVL