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MS006327 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006327
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold123_1:88952..89071
RNA-Seq ExpressionMS006327
SyntenyMS006327
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]5.1e-0670Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        ES TI AP+LE+ KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
KGN52679.1 hypothetical protein Csa_008030 [Cucumis sativus]3.3e-0567.5Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        E+ TI AP+LE  KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]5.1e-0670Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        ES TI AP+LE+ KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
XP_022141792.1 uncharacterized protein LOC111012078 [Momordica charantia]7.4e-1397.5Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        +SPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]2.1e-0465Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        ES TI APKL++ KLCA+  +ELTFP+VEL TP L++VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
TrEMBL top hitse value%identityAlignment
A0A0A0KUU7 F-box domain-containing protein1.6e-0567.5Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        E+ TI AP+LE  KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X12.5e-0670Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        ES TI AP+LE+ KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
A0A5A7TCF1 F-box/LRR-repeat protein2.5e-0670Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        ES TI AP+LE+ KLCA+ ++ELTFP+VELLTP LK+VNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
A0A6J1CKV1 uncharacterized protein LOC1110120783.6e-1397.5Show/hide
Query:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
        +SPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
Subjt:  ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAGAGTCCTACTATTTATGCTCCAAAGCTTGAGCATTCTAAATTGTGTGCTACTTTCGAAATAGAATTAACTTTTCCAAAAGTTGAATTACTTACCCCAAATCTCAAAAG
TGTTAATTTC
mRNA sequenceShow/hide mRNA sequence
GAGAGTCCTACTATTTATGCTCCAAAGCTTGAGCATTCTAAATTGTGTGCTACTTTCGAAATAGAATTAACTTTTCCAAAAGTTGAATTACTTACCCCAAATCTCAAAAG
TGTTAATTTC
Protein sequenceShow/hide protein sequence
ESPTIYAPKLEHSKLCATFEIELTFPKVELLTPNLKSVNF