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MS006331 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006331
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein
Genome locationscaffold123_1:156212..156549
RNA-Seq ExpressionMS006331
SyntenyMS006331
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]8.6e-1955.86Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS
        G LALPSLK+LEI       ++  N D     MFSGCPNLESLVL  Y+F SATI APRLENF+L  S +  LT P++EL TP   +V F NVLP +   
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        ++SEFSCI KV
Subjt:  ANSEFSCIHKV

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]8.6e-1955.86Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS
        G LALPSLK+LEI       ++  N D     MFSGCPNLESLVL  Y+F SATI APRLENF+L  S +  LT P++EL TP   +V F NVLP +   
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        ++SEFSCI KV
Subjt:  ANSEFSCIHKV

XP_022141794.1 F-box/FBD/LRR-repeat protein At2g04230-like [Momordica charantia]8.4e-2271.76Show/hide
Query:  LGALALPSLKVLEIVSRHWPEE---KLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRT
        LGALALPSLKVLEIV+RHWPE+   K  N+DAKF DMFSGCPNLESLVLSH+IF SATICAP+L NFEL    N   L  L+L+T
Subjt:  LGALALPSLKVLEIVSRHWPEE---KLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRT

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]1.6e-1755.65Show/hide
Query:  NLGALALPSLKVLEIV--SRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFEL-GVSSNGLTLPKLELRTPNHTSVKFSNVLPT
        N   LALPSLK LEI     HW E+   N       MF GCPNLESLV   Y+F SATI AP+LEN EL   S  GLT P++EL TP   SV F NVLP 
Subjt:  NLGALALPSLKVLEIV--SRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFEL-GVSSNGLTLPKLELRTPNHTSVKFSNVLPT

Query:  MIKSANSEFSCIHKV
         I  ++SEF CIHKV
Subjt:  MIKSANSEFSCIHKV

XP_038890214.1 F-box/LRR-repeat protein At3g26922-like [Benincasa hispida]4.7e-1753.15Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS
        G LA+PSLK+LEI    +  +K  N   K   MF GCPNLESLVL  Y+F S+TI AP+L+N +L  S    LT P++EL TP   +V F NVLP  I  
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        ++SEFSCIHKV
Subjt:  ANSEFSCIHKV

TrEMBL top hitse value%identityAlignment
A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X14.2e-1955.86Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS
        G LALPSLK+LEI       ++  N D     MFSGCPNLESLVL  Y+F SATI APRLENF+L  S +  LT P++EL TP   +V F NVLP +   
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        ++SEFSCI KV
Subjt:  ANSEFSCIHKV

A0A5A7TCF1 F-box/LRR-repeat protein4.2e-1955.86Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS
        G LALPSLK+LEI       ++  N D     MFSGCPNLESLVL  Y+F SATI APRLENF+L  S +  LT P++EL TP   +V F NVLP +   
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSN-GLTLPKLELRTPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        ++SEFSCI KV
Subjt:  ANSEFSCIHKV

A0A6J1CJ18 LOW QUALITY PROTEIN: putative FBD-associated F-box protein At5g568209.7e-1652.68Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFG--DMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRTPNHTSVKFSNVLPTMIK
        GAL   SL++LEI    W +      D K+   +MFSGCPNLESLVL +Y+F SATI AP+LEN EL  S      P++EL  P+  ++KF NVLPT +K
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFG--DMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRTPNHTSVKFSNVLPTMIK

Query:  SANSEFSCIHKV
        SA S+F+CIHKV
Subjt:  SANSEFSCIHKV

A0A6J1CJT8 F-box/FBD/LRR-repeat protein At2g04230-like4.0e-2271.76Show/hide
Query:  LGALALPSLKVLEIVSRHWPEE---KLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRT
        LGALALPSLKVLEIV+RHWPE+   K  N+DAKF DMFSGCPNLESLVLSH+IF SATICAP+L NFEL    N   L  L+L+T
Subjt:  LGALALPSLKVLEIVSRHWPEE---KLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRT

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like1.1e-1450.45Show/hide
Query:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELR-TPNHTSVKFSNVLPTMIKS
        G L LPSL++LEI      ++     D K   MFSGCPNL+SLVL +Y+F SATICAP+LEN  L  S N L   ++EL  T +  +V FSN+LPT+  +
Subjt:  GALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELR-TPNHTSVKFSNVLPTMIKS

Query:  ANSEFSCIHKV
        +  EFSCI KV
Subjt:  ANSEFSCIHKV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTTGGGAGCCTTGGCATTGCCATCCTTGAAAGTTTTAGAGATTGTAAGTCGTCATTGGCCAGAGGAGAAATTGATGAATGTCGATGCCAAATTTGGAGACATGTTCTC
CGGCTGTCCAAATTTGGAATCTTTGGTCTTGAGTCACTATATTTTTGGGAGTGCTACAATTTGTGCTCCAAGACTTGAGAATTTTGAATTGGGTGTTTCTTCTAATGGGT
TGACTTTGCCCAAACTTGAGTTACGTACGCCGAATCACACAAGTGTCAAGTTTAGCAATGTTTTACCCACTATGATCAAGTCGGCTAATTCAGAATTTTCTTGCATACAC
AAAGTA
mRNA sequenceShow/hide mRNA sequence
AACTTGGGAGCCTTGGCATTGCCATCCTTGAAAGTTTTAGAGATTGTAAGTCGTCATTGGCCAGAGGAGAAATTGATGAATGTCGATGCCAAATTTGGAGACATGTTCTC
CGGCTGTCCAAATTTGGAATCTTTGGTCTTGAGTCACTATATTTTTGGGAGTGCTACAATTTGTGCTCCAAGACTTGAGAATTTTGAATTGGGTGTTTCTTCTAATGGGT
TGACTTTGCCCAAACTTGAGTTACGTACGCCGAATCACACAAGTGTCAAGTTTAGCAATGTTTTACCCACTATGATCAAGTCGGCTAATTCAGAATTTTCTTGCATACAC
AAAGTA
Protein sequenceShow/hide protein sequence
NLGALALPSLKVLEIVSRHWPEEKLMNVDAKFGDMFSGCPNLESLVLSHYIFGSATICAPRLENFELGVSSNGLTLPKLELRTPNHTSVKFSNVLPTMIKSANSEFSCIH
KV