; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006332 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006332
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/FBD/LRR-repeat protein At2g04230-like
Genome locationscaffold123_1:162210..163133
RNA-Seq ExpressionMS006332
SyntenyMS006332
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039267.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]9.2e-6347.47Show/hide
Query:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE
        +DDRISLLPD LLH ILS+ N K VVQTC+LSKRWKTLWT IP LN     F    S+       K   FK F+ RVLS+H    IQKL+Y     G + 
Subjt:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC+A  HNV ++ I+TY  G     +C   CSSL  LK+ CG  D  G L LPSLK+LEI       D+    + +      MFSGCPNLESLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR
        L  + F SATI AP+L NF+LC S    LT  ++EL TP LK+V F NVLP  ++  DS+FS + KV+IQ++D  F       D S  + L     +LL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR

Query:  VFRNARCFTLPLNSLQ
        V  NA  FTLP+ + Q
Subjt:  VFRNARCFTLPLNSLQ

XP_008459617.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]5.4e-6347.47Show/hide
Query:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE
        EDDRISLLPD LLH ILS  N K VVQTC+LSKRWKTLWT IP LN     F    S+       K   FK F+ RVLS+H    IQKL+Y     G + 
Subjt:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC+A  HNV ++ ++TY  G     +C   CSSL  LK+ CG  D  G L LPSLK+LEI       D+    + +      MFSGCPNLESLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR
        L  + F SATI AP+L NF+LC S    LT  ++EL TP LK+V F NVLP  ++  DS+FS + KV+IQ++D  F       D S  + L     +LL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR

Query:  VFRNARCFTLPLNSLQ
        V  NA  FTLP+ + Q
Subjt:  VFRNARCFTLPLNSLQ

XP_022141791.1 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like [Momordica charantia]4.9e-6451.1Show/hide
Query:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNF------LDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV---GHDE-
        +DRISLLPDCLL  ILSNIN KQVVQTCVLSKRWKTLWT IP LNF       ++ S     S  K   FK+F+ R+LSE     IQKLSY      DE 
Subjt:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNF------LDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV---GHDE-

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC ARRHNV E+Y+ TY     + K+CLS CSSLTVLK+ CG     G L LPSL++LEI      +D        D K   MFSGCPNL+SLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELR-TPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELL
        L ++ F SATICAPKL N  LC  +   L   ++EL  T +L++V F N+LPT+      +FS + KVNI+V +Y F   S G +    +N I   SEL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELR-TPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELL

Query:  RVFRNARCFTLPLNSLQ
        RVF NAR F LPL   Q
Subjt:  RVFRNARCFTLPLNSLQ

XP_022141794.1 F-box/FBD/LRR-repeat protein At2g04230-like [Momordica charantia]2.8e-12088.11Show/hide
Query:  EEDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLIC
        EEDDRISLLPDCLL QILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKP CFKHFVIRVLSEHRGEHIQKLSYVGHD+LLAESLIC
Subjt:  EEDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLIC

Query:  HARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHNFRS
        HARRHNVGEIYIHTYVNGFRN KHCLSGCSSLTVLKISCGVADYLGAL LPSLKVLEI+NRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHH FRS
Subjt:  HARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHNFRS

Query:  ATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPT
        ATICAPKLYNFEL     W L         PNLK +K +  +PT
Subjt:  ATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPT

XP_038890213.1 uncharacterized protein LOC120079853 [Benincasa hispida]2.2e-6450.16Show/hide
Query:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNH-----KPICFKHFVIRVLSEHRGEHIQKLSYVG---HDEL-
        +D+IS +PDC+LH+ILS +N K VVQTCVLSKRWK LWTHIP LNF  +     + S +     K   FK+F+IRVLS+H   +IQKL+Y      DEL 
Subjt:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNH-----KPICFKHFVIRVLSEHRGEHIQKLSYVG---HDEL-

Query:  LAESLICHARRHNVGEIYIH-TYVNGFRNM-KHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEIL--NRHWPEDQNVKKNNLDAKFEDMFSGCPNLE
        L E LIC+A  HNV ++ I+ TY+    ++  +C S CSSL  LK+ CG  D    L LPSLK LEI     HW E  N            MF GCPNLE
Subjt:  LAESLICHARRHNVGEIYIH-TYVNGFRNM-KHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEIL--NRHWPEDQNVKKNNLDAKFEDMFSGCPNLE

Query:  SLVLSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSE
        SLV   + F SATI APKL N ELC  S +GLT  ++EL TP LKSV F NVLP  I+  DS+F  +HKVNIQ+ED  F+    G    +++    N  E
Subjt:  SLVLSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSE

Query:  LLRVFRNARCFTLPLNSLQ
        LLRVF NAR FTLPL + Q
Subjt:  LLRVFRNARCFTLPLNSLQ

TrEMBL top hitse value%identityAlignment
A0A0A0KSW6 F-box domain-containing protein3.1e-5646.06Show/hide
Query:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYG------RVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDE---
        E+DRISLLPDCLLH+ILS +N K VVQTCVLSKRWKTLWT IP LNF  + SY             K   FK+F+IRVLS+ R + I+KL+Y        
Subjt:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYG------RVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDE---

Query:  --LLAESLICHARRHNVGEIYIHTY---VNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPN
          +LA+ LI +AR H+V +++++T+    + F +    ++ CSSL  LK+ C  AD L  L LPSLK+LEI    W E  + + N+   K   MF GCPN
Subjt:  --LLAESLICHARRHNVGEIYIHTY---VNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPN

Query:  LESLVLSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNL
        LESLV   H F++ATI APKL N +LC S     T  +++L TP L+++ F NVLPT  +  D +FS + KV+IQ+   +     +  D +SRK+     
Subjt:  LESLVLSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNL

Query:  SELLRVFRNARCFTLPL
         ELL VF  AR FTLPL
Subjt:  SELLRVFRNARCFTLPL

A0A1S3CB41 F-box/LRR-repeat protein At3g26922-like isoform X12.6e-6347.47Show/hide
Query:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE
        EDDRISLLPD LLH ILS  N K VVQTC+LSKRWKTLWT IP LN     F    S+       K   FK F+ RVLS+H    IQKL+Y     G + 
Subjt:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC+A  HNV ++ ++TY  G     +C   CSSL  LK+ CG  D  G L LPSLK+LEI       D+    + +      MFSGCPNLESLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR
        L  + F SATI AP+L NF+LC S    LT  ++EL TP LK+V F NVLP  ++  DS+FS + KV+IQ++D  F       D S  + L     +LL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR

Query:  VFRNARCFTLPLNSLQ
        V  NA  FTLP+ + Q
Subjt:  VFRNARCFTLPLNSLQ

A0A5A7TCF1 F-box/LRR-repeat protein4.5e-6347.47Show/hide
Query:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE
        +DDRISLLPD LLH ILS+ N K VVQTC+LSKRWKTLWT IP LN     F    S+       K   FK F+ RVLS+H    IQKL+Y     G + 
Subjt:  EDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALN-----FLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDE

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC+A  HNV ++ I+TY  G     +C   CSSL  LK+ CG  D  G L LPSLK+LEI       D+    + +      MFSGCPNLESLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR
        L  + F SATI AP+L NF+LC S    LT  ++EL TP LK+V F NVLP  ++  DS+FS + KV+IQ++D  F       D S  + L     +LL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLR

Query:  VFRNARCFTLPLNSLQ
        V  NA  FTLP+ + Q
Subjt:  VFRNARCFTLPLNSLQ

A0A6J1CJT8 F-box/FBD/LRR-repeat protein At2g04230-like1.4e-12088.11Show/hide
Query:  EEDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLIC
        EEDDRISLLPDCLL QILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKP CFKHFVIRVLSEHRGEHIQKLSYVGHD+LLAESLIC
Subjt:  EEDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLIC

Query:  HARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHNFRS
        HARRHNVGEIYIHTYVNGFRN KHCLSGCSSLTVLKISCGVADYLGAL LPSLKVLEI+NRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHH FRS
Subjt:  HARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHNFRS

Query:  ATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPT
        ATICAPKLYNFEL     W L         PNLK +K +  +PT
Subjt:  ATICAPKLYNFELCVSSIWGLTSHKLELRTPNLKSVKFRNVLPT

A0A6J1CKA9 LOW QUALITY PROTEIN: F-box/FBD/LRR-repeat protein At5g18770-like2.4e-6451.1Show/hide
Query:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNF------LDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV---GHDE-
        +DRISLLPDCLL  ILSNIN KQVVQTCVLSKRWKTLWT IP LNF       ++ S     S  K   FK+F+ R+LSE     IQKLSY      DE 
Subjt:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNF------LDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV---GHDE-

Query:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV
        +L E LIC ARRHNV E+Y+ TY     + K+CLS CSSLTVLK+ CG     G L LPSL++LEI      +D        D K   MFSGCPNL+SLV
Subjt:  LLAESLICHARRHNVGEIYIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLV

Query:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELR-TPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELL
        L ++ F SATICAPKL N  LC  +   L   ++EL  T +L++V F N+LPT+      +FS + KVNI+V +Y F   S G +    +N I   SEL 
Subjt:  LSHHNFRSATICAPKLYNFELCVSSIWGLTSHKLELR-TPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELL

Query:  RVFRNARCFTLPLNSLQ
        RVF NAR F LPL   Q
Subjt:  RVFRNARCFTLPLNSLQ

SwissProt top hitse value%identityAlignment
Q6NKX3 F-box/FBD/LRR-repeat protein At2g042305.2e-1628.06Show/hide
Query:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRV--HSNHKPICFKHFVIRVLSEHRGEHIQK--LSYVGHDELLAESL
        +DRIS LPD LL QILS++  +  + T VLSKRW++LWT +P L F  D ++  V    N  P  F   V + LS H+   ++   LS+ G  + L   +
Subjt:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRV--HSNHKPICFKHFVIRVLSEHRGEHIQK--LSYVGHDELLAESL

Query:  -ICHARRHNVGEIYIHTYVNGFRNM---KHCLSGCSSLTVLKISCGV-ADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL
         I  A    V ++ + ++    + +       S   SL +LK+ C +  D+   + L SL+ L +   H+ ++++V          ++  GCP+L+ LV+
Subjt:  -ICHARRHNVGEIYIHTYVNGFRNM---KHCLSGCSSLTVLKISCGV-ADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL

Query:  ---SHHNFRSATICAPKLYNFEL-CVSSIWGLTSHKLELRTPNLKSVKFRNVL
           S+ +  + TI +P L    +  +    G  +    +  P LK +    V+
Subjt:  ---SHHNFRSATICAPKLYNFEL-CVSSIWGLTSHKLELRTPNLKSVKFRNVL

Q9FM87 Putative FBD-associated F-box protein At5g564401.7e-1429.44Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR
        DRISLLPD ++ +ILS +  K VV T +LSKRW+ LW H+P L++ D       H        K  ++         H+         ++  E+ I  A 
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR

Query:  RHNVGEIYIHTYV--NGFRNMKHCLSGCSSLT--VLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL--SHHN
           V  ++I+ Y+   G   +   L  C +L    L +   V D        SLKVL +L   +  D+ V +         + SGCP LE L+L   + N
Subjt:  RHNVGEIYIHTYV--NGFRNMKHCLSGCSSLT--VLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL--SHHN

Query:  FRSATICAPKLYNFEL--CVSSIWGLTSHKLELRTPNLKSVKFRNVLP
         ++ TI AP L       C S + G       ++ P+LKS+   N  P
Subjt:  FRSATICAPKLYNFEL--CVSSIWGLTSHKLELRTPNLKSVKFRNVLP

Q9FM89 F-box/FBD/LRR-repeat protein At5g564201.7e-1431.03Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR
        DR+S LPD  L QILS +  K V+ T +LSKRW+ LWT +P LN+       R+H N  P  F  FV R L  H+   ++ L+       +    IC   
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR

Query:  RHNVGEIYIHTYVNGF--------------RNMKHCLSGCSSLTVLKI-SCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNL
          +VG +++   V+ F                +  CL  CS+L VLK+ +  + D    +   SLK L +L+  + +DQ++ +         + S C +L
Subjt:  RHNVGEIYIHTYVNGF--------------RNMKHCLSGCSSLTVLKI-SCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNL

Query:  ESLVLSH---HNFRSATICAPKLYNFELCVSS
        E LV+      N +  T+ AP L    L  SS
Subjt:  ESLVLSH---HNFRSATICAPKLYNFELCVSS

Q9FZ52 F-box/FBD/LRR-repeat protein At1g169308.8e-1631.19Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPAL-----NFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDELL
        DRIS LPD LL QILS+++ K+ V T VLSKRW+ LW H+P L     NF DD              F  FV R L     +H+++   +     HD   
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPAL-----NFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDELL

Query:  AESLICHARRHNVGEIYIHTYVNG---FRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESL
         +S I    +  V    +H  V+       M   L  C  L  L++     D+  ++ LP +K++ +         ++ K + D+  E + SGCP LE L
Subjt:  AESLICHARRHNVGEIYIHTYVNG---FRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESL

Query:  VL
         +
Subjt:  VL

Q9LXQ6 Putative F-box protein At3g440601.7e-1431.78Show/hide
Query:  LPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDEL------LAESLICHA
        LPD LL QIL  +  K+ V T VLSKRW+TL+T    L+F D  S GR     K   F  FV   L+   G+HI+K S   H ++      + +  IC+A
Subjt:  LPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDEL------LAESLICHA

Query:  RRHNVGEIYIHTYVNGFRNMKHCLSGC-SSLTVLKISCGVADYLGAL----ELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHN
          H V E+++H     +  +    S   +S T++K+S G   Y  +      LP+LKVL + +  + +DQ    +N+        + CP LE L + HH 
Subjt:  RRHNVGEIYIHTYVNGFRNMKHCLSGC-SSLTVLKISCGVADYLGAL----ELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHN

Query:  FRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNL
        +    I +  +    L V+S +    + L L TP++
Subjt:  FRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNL

Arabidopsis top hitse value%identityAlignment
AT1G16930.1 F-box/RNI-like/FBD-like domains-containing protein6.2e-1731.19Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPAL-----NFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDELL
        DRIS LPD LL QILS+++ K+ V T VLSKRW+ LW H+P L     NF DD              F  FV R L     +H+++   +     HD   
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPAL-----NFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYV----GHDELL

Query:  AESLICHARRHNVGEIYIHTYVNG---FRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESL
         +S I    +  V    +H  V+       M   L  C  L  L++     D+  ++ LP +K++ +         ++ K + D+  E + SGCP LE L
Subjt:  AESLICHARRHNVGEIYIHTYVNG---FRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESL

Query:  VL
         +
Subjt:  VL

AT2G04230.1 FBD, F-box and Leucine Rich Repeat domains containing protein3.7e-1728.06Show/hide
Query:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRV--HSNHKPICFKHFVIRVLSEHRGEHIQK--LSYVGHDELLAESL
        +DRIS LPD LL QILS++  +  + T VLSKRW++LWT +P L F  D ++  V    N  P  F   V + LS H+   ++   LS+ G  + L   +
Subjt:  DDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRV--HSNHKPICFKHFVIRVLSEHRGEHIQK--LSYVGHDELLAESL

Query:  -ICHARRHNVGEIYIHTYVNGFRNM---KHCLSGCSSLTVLKISCGV-ADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL
         I  A    V ++ + ++    + +       S   SL +LK+ C +  D+   + L SL+ L +   H+ ++++V          ++  GCP+L+ LV+
Subjt:  -ICHARRHNVGEIYIHTYVNGFRNM---KHCLSGCSSLTVLKISCGV-ADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL

Query:  ---SHHNFRSATICAPKLYNFEL-CVSSIWGLTSHKLELRTPNLKSVKFRNVL
           S+ +  + TI +P L    +  +    G  +    +  P LK +    V+
Subjt:  ---SHHNFRSATICAPKLYNFEL-CVSSIWGLTSHKLELRTPNLKSVKFRNVL

AT3G44060.1 F-box/RNI-like superfamily protein1.2e-1531.78Show/hide
Query:  LPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDEL------LAESLICHA
        LPD LL QIL  +  K+ V T VLSKRW+TL+T    L+F D  S GR     K   F  FV   L+   G+HI+K S   H ++      + +  IC+A
Subjt:  LPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDEL------LAESLICHA

Query:  RRHNVGEIYIHTYVNGFRNMKHCLSGC-SSLTVLKISCGVADYLGAL----ELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHN
          H V E+++H     +  +    S   +S T++K+S G   Y  +      LP+LKVL + +  + +DQ    +N+        + CP LE L + HH 
Subjt:  RRHNVGEIYIHTYVNGFRNMKHCLSGC-SSLTVLKISCGVADYLGAL----ELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHN

Query:  FRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNL
        +    I +  +    L V+S +    + L L TP++
Subjt:  FRSATICAPKLYNFELCVSSIWGLTSHKLELRTPNL

AT5G56420.1 F-box/RNI-like/FBD-like domains-containing protein1.2e-1531.03Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR
        DR+S LPD  L QILS +  K V+ T +LSKRW+ LWT +P LN+       R+H N  P  F  FV R L  H+   ++ L+       +    IC   
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR

Query:  RHNVGEIYIHTYVNGF--------------RNMKHCLSGCSSLTVLKI-SCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNL
          +VG +++   V+ F                +  CL  CS+L VLK+ +  + D    +   SLK L +L+  + +DQ++ +         + S C +L
Subjt:  RHNVGEIYIHTYVNGF--------------RNMKHCLSGCSSLTVLKI-SCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNL

Query:  ESLVLSH---HNFRSATICAPKLYNFELCVSS
        E LV+      N +  T+ AP L    L  SS
Subjt:  ESLVLSH---HNFRSATICAPKLYNFELCVSS

AT5G56440.1 F-box/RNI-like/FBD-like domains-containing protein1.2e-1529.44Show/hide
Query:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR
        DRISLLPD ++ +ILS +  K VV T +LSKRW+ LW H+P L++ D       H        K  ++         H+         ++  E+ I  A 
Subjt:  DRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHAR

Query:  RHNVGEIYIHTYV--NGFRNMKHCLSGCSSLT--VLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL--SHHN
           V  ++I+ Y+   G   +   L  C +L    L +   V D        SLKVL +L   +  D+ V +         + SGCP LE L+L   + N
Subjt:  RHNVGEIYIHTYV--NGFRNMKHCLSGCSSLT--VLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVL--SHHN

Query:  FRSATICAPKLYNFEL--CVSSIWGLTSHKLELRTPNLKSVKFRNVLP
         ++ TI AP L       C S + G       ++ P+LKS+   N  P
Subjt:  FRSATICAPKLYNFEL--CVSSIWGLTSHKLELRTPNLKSVKFRNVLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GAAGAAGACGACAGAATCAGCCTTCTCCCAGATTGTCTTCTTCATCAGATTCTCTCCAACATAAACATAAAACAAGTTGTCCAAACTTGTGTTCTTTCAAAACGGTGGAA
AACCCTTTGGACTCATATCCCCGCTCTCAACTTCTTGGATGATGGCTCCTACGGTAGAGTTCATTCTAATCACAAACCAATATGTTTTAAGCACTTTGTCATCAGAGTTT
TATCTGAACACCGCGGTGAACATATTCAAAAACTGAGTTACGTTGGACATGATGAACTTTTAGCAGAGTCATTGATATGTCATGCACGGCGCCACAATGTTGGAGAAATT
TACATCCATACCTACGTTAATGGTTTTCGTAACATGAAACACTGTTTGTCGGGATGTTCATCGCTCACTGTGCTGAAGATTTCATGTGGGGTTGCGGATTACTTGGGAGC
CTTGGAATTGCCATCCTTGAAAGTTTTAGAGATTCTGAATCGTCATTGGCCGGAGGATCAGAACGTGAAGAAGAATAATCTTGATGCTAAATTTGAAGACATGTTCTCCG
GCTGTCCAAATTTGGAATCTTTGGTTTTGAGTCACCATAATTTTAGGAGTGCTACAATTTGTGCTCCAAAACTTTACAACTTTGAATTGTGTGTTTCTTCTATTTGGGGG
TTGACTTCGCACAAACTTGAGTTACGTACACCCAATCTCAAAAGTGTCAAGTTTAGAAATGTCTTACCTACTATGATCATGTGTGATGATTCAGACTTTTCCTACCTACA
CAAAGTGAATATACAAGTTGAAGATTATTATTTTCAACCCATATCAAAAGGCAAAGACTCAAGTAGTAGAAAAAATTTGATTCAAAATCTCAGTGAGTTGCTTAGAGTGT
TTCGTAATGCAAGGTGTTTCACACTACCTCTGAATTCATTACAG
mRNA sequenceShow/hide mRNA sequence
GAAGAAGACGACAGAATCAGCCTTCTCCCAGATTGTCTTCTTCATCAGATTCTCTCCAACATAAACATAAAACAAGTTGTCCAAACTTGTGTTCTTTCAAAACGGTGGAA
AACCCTTTGGACTCATATCCCCGCTCTCAACTTCTTGGATGATGGCTCCTACGGTAGAGTTCATTCTAATCACAAACCAATATGTTTTAAGCACTTTGTCATCAGAGTTT
TATCTGAACACCGCGGTGAACATATTCAAAAACTGAGTTACGTTGGACATGATGAACTTTTAGCAGAGTCATTGATATGTCATGCACGGCGCCACAATGTTGGAGAAATT
TACATCCATACCTACGTTAATGGTTTTCGTAACATGAAACACTGTTTGTCGGGATGTTCATCGCTCACTGTGCTGAAGATTTCATGTGGGGTTGCGGATTACTTGGGAGC
CTTGGAATTGCCATCCTTGAAAGTTTTAGAGATTCTGAATCGTCATTGGCCGGAGGATCAGAACGTGAAGAAGAATAATCTTGATGCTAAATTTGAAGACATGTTCTCCG
GCTGTCCAAATTTGGAATCTTTGGTTTTGAGTCACCATAATTTTAGGAGTGCTACAATTTGTGCTCCAAAACTTTACAACTTTGAATTGTGTGTTTCTTCTATTTGGGGG
TTGACTTCGCACAAACTTGAGTTACGTACACCCAATCTCAAAAGTGTCAAGTTTAGAAATGTCTTACCTACTATGATCATGTGTGATGATTCAGACTTTTCCTACCTACA
CAAAGTGAATATACAAGTTGAAGATTATTATTTTCAACCCATATCAAAAGGCAAAGACTCAAGTAGTAGAAAAAATTTGATTCAAAATCTCAGTGAGTTGCTTAGAGTGT
TTCGTAATGCAAGGTGTTTCACACTACCTCTGAATTCATTACAG
Protein sequenceShow/hide protein sequence
EEDDRISLLPDCLLHQILSNINIKQVVQTCVLSKRWKTLWTHIPALNFLDDGSYGRVHSNHKPICFKHFVIRVLSEHRGEHIQKLSYVGHDELLAESLICHARRHNVGEI
YIHTYVNGFRNMKHCLSGCSSLTVLKISCGVADYLGALELPSLKVLEILNRHWPEDQNVKKNNLDAKFEDMFSGCPNLESLVLSHHNFRSATICAPKLYNFELCVSSIWG
LTSHKLELRTPNLKSVKFRNVLPTMIMCDDSDFSYLHKVNIQVEDYYFQPISKGKDSSSRKNLIQNLSELLRVFRNARCFTLPLNSLQ