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MS006333 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006333
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box/LRR-repeat protein At3g26922-like isoform X2
Genome locationscaffold123_1:171650..171919
RNA-Seq ExpressionMS006333
SyntenyMS006333
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039262.1 F-box/LRR-repeat protein [Cucumis melo var. makuwa]2.3e-0641.49Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M  + PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LCTP L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

KAE8649007.1 hypothetical protein Csa_008094 [Cucumis sativus]6.7e-0641.49Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LCTP L  VK ++++P L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

XP_008459622.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X1 [Cucumis melo]8.8e-0640.43Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LC+P L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

XP_011656097.2 F-box/LRR-repeat protein At3g26922 [Cucumis sativus]6.7e-0641.49Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LCTP L  VK ++++P L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

XP_016902420.1 PREDICTED: F-box/LRR-repeat protein At3g26922-like isoform X2 [Cucumis melo]8.8e-0640.43Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LC+P L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

TrEMBL top hitse value%identityAlignment
A0A0A0KSU4 F-box domain-containing protein3.3e-0641.49Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LCTP L  VK ++++P L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

A0A1S3CAL9 F-box/LRR-repeat protein At3g26922-like isoform X14.3e-0640.43Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LC+P L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

A0A1S4E367 F-box/LRR-repeat protein At3g26922-like isoform X24.3e-0640.43Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M    PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LC+P L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

A0A5D3BMW8 F-box/LRR-repeat protein1.1e-0641.49Show/hide
Query:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST
        +FLKSLEI N    +   + E  M  + PLL+RL+++G  F  + + APKLEYL +   I  C ++    EI LCTP L  VK ++++P+L ST
Subjt:  KFLKSLEINNESNSYV--KLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDW--FPEIVLCTPQLASVKFESVLPFLFST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAGTTTTTGAAATCTCTTGAGATTAATAATGAATCGAATAGCTATGTGAAACTTGAGGGAGACATGTTTAAAAGCTGCCCACTTCTCCAACGTTTGGTTATGCAAGGTCG
TTTGTTCGCATGTGTGAAAGTCACTGCTCCGAAACTTGAATATTTGCCAATCACAAGGTTGATTCATTATTGTGATGATTGGTTTCCAGAGATTGTGTTGTGTACACCTC
AGCTGGCATCTGTAAAATTTGAAAGTGTTCTGCCATTTTTGTTCTCAACT
mRNA sequenceShow/hide mRNA sequence
AAGTTTTTGAAATCTCTTGAGATTAATAATGAATCGAATAGCTATGTGAAACTTGAGGGAGACATGTTTAAAAGCTGCCCACTTCTCCAACGTTTGGTTATGCAAGGTCG
TTTGTTCGCATGTGTGAAAGTCACTGCTCCGAAACTTGAATATTTGCCAATCACAAGGTTGATTCATTATTGTGATGATTGGTTTCCAGAGATTGTGTTGTGTACACCTC
AGCTGGCATCTGTAAAATTTGAAAGTGTTCTGCCATTTTTGTTCTCAACT
Protein sequenceShow/hide protein sequence
KFLKSLEINNESNSYVKLEGDMFKSCPLLQRLVMQGRLFACVKVTAPKLEYLPITRLIHYCDDWFPEIVLCTPQLASVKFESVLPFLFST