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MS006338 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006338
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger and BTB domain-containing protein 11 isoform 1
Genome locationscaffold123_1:250279..253281
RNA-Seq ExpressionMS006338
SyntenyMS006338
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141555.1 uncharacterized protein LOC101206859 [Cucumis sativus]7.4e-6595.59Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA AK+KVTKNPGET VMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYN SRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEK RRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
XP_008459636.1 PREDICTED: uncharacterized protein LOC103498699 [Cucumis melo]1.0e-6697.79Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA+AKLKVTKNPGET VMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
XP_022141748.1 uncharacterized protein LOC111012033 [Momordica charantia]4.2e-6899.26Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
XP_022925469.1 uncharacterized protein LOC111432761 [Cucurbita moschata]2.8e-6494.85Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA AKLKVTKNPGETPVMHVPRKKS+KSKS  EEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYN SRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        L+FFTRIFTQFFDPEGIANAQKSLGLGQEEK RRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
XP_038889821.1 uncharacterized protein LOC120079628 [Benincasa hispida]7.9e-6797.79Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEE DEFA AKLKVTKNPGETPVMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
TrEMBL top hitse value%identityAlignment
A0A0A0KW70 Uncharacterized protein3.6e-6595.59Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA AK+KVTKNPGET VMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYN SRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEK RRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
A0A1S3CAM9 uncharacterized protein LOC1034986995.0e-6797.79Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA+AKLKVTKNPGET VMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
A0A6J1CLF2 uncharacterized protein LOC1110120332.0e-6899.26Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKS KEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
A0A6J1EC96 uncharacterized protein LOC1114327611.4e-6494.85Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA AKLKVTKNPGETPVMHVPRKKS+KSKS  EEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYN SRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        L+FFTRIFTQFFDPEGIANAQKSLGLGQEEK RRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
A0A6J1IEW6 uncharacterized protein LOC1114726051.4e-6494.85Show/hide
Query:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN
        MAKKKQLASSAPWRGEEEVDEFA AKLKVTKNPGETPVMHVPRKKS+KSKS  EEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYN SRN
Subjt:  MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRN

Query:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        L+FFTRIFTQFFDPEGIANAQKSLGLGQEEK RRVR
Subjt:  LNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G33810.1 unknown protein2.2e-5172.46Show/hide
Query:  MAKKKQLASSAPWRG--EEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVS
        MAKKK+L S APWRG  E++ D+F++AKLKVTK+      MHVP + + K     ++DDSLEIDP+LRYSF RNYQFLQ VF+IDT+VKPLPP+MA+NVS
Subjt:  MAKKKQLASSAPWRG--EEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVS

Query:  RNLNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
        RNL+FFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR
Subjt:  RNLNFFTRIFTQFFDPEGIANAQKSLGLGQEEKARRVR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGAAGAAGCAGTTGGCGTCTTCAGCTCCATGGCGGGGCGAGGAGGAGGTGGACGAGTTCGCCGACGCGAAGCTCAAAGTTACTAAGAATCCCGGCGAGACTCC
GGTAATGCATGTTCCTCGCAAGAAGAGCGTCAAGTCCAAGAGCTACAAAGAGGAGGATGACTCCCTCGAGATTGACCCTGAGCTCCGCTACAGTTTCCAACGCAATTACC
AGTTTCTTCAACGAGTATTCAGCATTGACACTATTGTCAAACCTCTTCCACCGGCCATGGCTTACAATGTCTCCCGCAACTTGAACTTCTTTACTCGCATTTTCACACAG
TTCTTCGACCCTGAAGGCATTGCAAATGCTCAGAAATCACTTGGACTAGGGCAGGAAGAGAAAGCTCGCCGTGTTCGT
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGAAGAAGCAGTTGGCGTCTTCAGCTCCATGGCGGGGCGAGGAGGAGGTGGACGAGTTCGCCGACGCGAAGCTCAAAGTTACTAAGAATCCCGGCGAGACTCC
GGTAATGCATGTTCCTCGCAAGAAGAGCGTCAAGTCCAAGAGCTACAAAGAGGAGGATGACTCCCTCGAGATTGACCCTGAGCTCCGCTACAGTTTCCAACGCAATTACC
AGTTTCTTCAACGAGTATTCAGCATTGACACTATTGTCAAACCTCTTCCACCGGCCATGGCTTACAATGTCTCCCGCAACTTGAACTTCTTTACTCGCATTTTCACACAG
TTCTTCGACCCTGAAGGCATTGCAAATGCTCAGAAATCACTTGGACTAGGGCAGGAAGAGAAAGCTCGCCGTGTTCGT
Protein sequenceShow/hide protein sequence
MAKKKQLASSAPWRGEEEVDEFADAKLKVTKNPGETPVMHVPRKKSVKSKSYKEEDDSLEIDPELRYSFQRNYQFLQRVFSIDTIVKPLPPAMAYNVSRNLNFFTRIFTQ
FFDPEGIANAQKSLGLGQEEKARRVR