; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006362 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006362
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSmall ubiquitin-related modifier
Genome locationscaffold327:111484..111959
RNA-Seq ExpressionMS006362
SyntenyMS006362
Gene Ontology termsGO:0016925 - protein sumoylation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031386 - protein tag (molecular function)
GO:0044389 - ubiquitin-like protein ligase binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR022617 - Rad60/SUMO-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148070.1 small ubiquitin-related modifier 1-like [Momordica charantia]1.8e-47100Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
        MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA

XP_022952738.1 small ubiquitin-related modifier 1-like [Cucurbita moschata]4.7e-2766.32Show/hide
Query:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Subjt:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_022969393.1 small ubiquitin-related modifier 1-like isoform X2 [Cucurbita maxima]5.5e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_023553983.1 small ubiquitin-related modifier 1-like [Cucurbita pepo subsp. pepo]9.4e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        RE  TRKPE+EP  +YVN+KVNGQDGSEVYFR+ K+TQL +LM +YC+RQ  +   +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

XP_038888534.1 small ubiquitin-related modifier 1-like isoform X1 [Benincasa hispida]4.1e-3174.73Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        EE+ RKPES+PD EYVN+KVNGQDGSEVYFR+ K+TQLKKLM SYC+RQG + R +AFLLDGH I G QT E+LE++DGDEIDAM HHGGG
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

TrEMBL top hitse value%identityAlignment
A0A565CRL3 Small ubiquitin-related modifier7.0e-2154.08Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
        MS  +E  +KP  E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++L+++DGDEIDAM H  GGGGA
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA

A0A5A7V249 Small ubiquitin-related modifier 12.5e-2667.37Show/hide
Query:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHH-GGGGGA
        EE+TRK E +P+ EYVN+KVNGQDGSEVYFR+ KK++L KLM SYC+RQ  +   +AFL+DGH I G QT E+L L+DGDEIDAM HH GGGGGA
Subjt:  EESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHH-GGGGGA

A0A6J1D1W9 small ubiquitin-related modifier 1-like8.8e-48100Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
        MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA

A0A6J1GLF8 Small ubiquitin-related modifier2.3e-2766.32Show/hide
Query:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E   RKPE+EP +P YVN+KVNGQDGSEVYFR+ K+TQL KLM +YC+RQ  + R +AFLLDGH I GNQT ++L ++DGD+IDAM HHGGGGG
Subjt:  REESTRKPESEP-DPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

A0A6J1I0U8 small ubiquitin-related modifier 1-like isoform X22.7e-2867.02Show/hide
Query:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        +E  TRKPE++P   YVN+KVNGQDGSEVYFR+ K+TQL KLM  YC+RQ  + R +AFLLDGH I GNQT ++L ++DGDEIDAM HHGGGGG
Subjt:  REESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

SwissProt top hitse value%identityAlignment
O13351 Ubiquitin-like protein pmt3/smt35.0e-1643.18Show/hide
Query:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        T + + +P  E++N+KV GQD +EV+F+++K T+  KLM  YC RQG+    + FL+DG  I  +QTP +L+++DGD+I+A+    GG
Subjt:  TRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

P55852 Small ubiquitin-related modifier 14.0e-2150.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

P55857 Small ubiquitin-related modifier 18.0e-2253.12Show/hide
Query:  MSKREESTRKPE-SEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        MS   E  +KP   E    ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  + G QTP++LE++DGDEIDAM H  GG
Subjt:  MSKREESTRKPE-SEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q7ZTK7 Small ubiquitin-related modifier 2-A3.6e-1446.15Show/hide
Query:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        +++N+KV GQDGS V F+++++T L KLM +YC+RQG   R + F  DG  I    TP QLE++D D ID      GG
Subjt:  EYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

Q9FLP6 Small ubiquitin-related modifier 22.3e-2152.08Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

Arabidopsis top hitse value%identityAlignment
AT4G26840.1 small ubiquitin-like modifier 12.8e-2250.52Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG
        MS  +E  +KP       ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++L+++DGDEIDAM H  GG G
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGG

AT5G55160.1 small ubiquitin-like modifier 21.7e-2252.08Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG
        MS   E  +KP+      ++N+KV GQDG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEIDAM H  GGG
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGG

AT5G55160.2 small ubiquitin-like modifier 21.0e-1945.87Show/hide
Query:  MSKREESTRKPESEPDPEYVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEID
        MS   E  +KP+      ++N+KV GQ             DG+EV+FR+++ TQLKKLM +YC RQ  D   +AFL DG  +   QTP++LE++DGDEID
Subjt:  MSKREESTRKPESEPDPEYVNIKVNGQ-------------DGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEID

Query:  AMNHHGGGG
        AM H  GGG
Subjt:  AMNHHGGGG

AT5G55170.1 small ubiquitin-like modifier 34.1e-1343.02Show/hide
Query:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        KP  +    +V +KV  QDG EV F+ +K   LKKLM  YC R+G      AF+ +G  I G +TP++L+++DGD IDA     GG
Subjt:  KPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG

AT5G55856.1 Ubiquitin-like superfamily protein1.0e-1140.26Show/hide
Query:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG
        ++ +KV  QD   VYFR+++  +L+K+M +Y  + G +   + FL DG+ I  NQTP +L L+D DEI+A     GG
Subjt:  YVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGATCGAGAAGAAGAATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGT
TTATTTCAGGGTTCGAAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACA
TCACCGGAAACCAGACCCCGGAGCAGCTGGAGCTCAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCG
mRNA sequenceShow/hide mRNA sequence
AGATCGAGAAGAAGAATGTCGAAACGAGAAGAGAGTACCCGAAAACCCGAGTCAGAACCCGACCCCGAGTATGTCAACATCAAGGTCAATGGACAGGATGGGAGCGAAGT
TTATTTCAGGGTTCGAAAGAAAACCCAACTGAAGAAGCTCATGGCATCGTACTGTCAACGACAAGGCCAGGATCAACGAATAGTTGCTTTTCTGCTCGACGGCCATCACA
TCACCGGAAACCAGACCCCGGAGCAGCTGGAGCTCAAGGATGGAGATGAAATTGATGCGATGAATCACCACGGCGGTGGCGGCGGAGCG
Protein sequenceShow/hide protein sequence
RSRRRMSKREESTRKPESEPDPEYVNIKVNGQDGSEVYFRVRKKTQLKKLMASYCQRQGQDQRIVAFLLDGHHITGNQTPEQLELKDGDEIDAMNHHGGGGGA