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MS006373 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006373
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold327:186640..187023
RNA-Seq ExpressionMS006373
SyntenyMS006373
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061659.1 hypothetical protein E6C27_scaffold212G00280 [Cucumis melo var. makuwa]5.4e-1744.72Show/hide
Query:  FLWAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-----DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV
        F+    ILV    + V  ADS+HFGIHAVGHAVEPFCPGGYSDRGDHC H+  ++  N     DD DD F      V +LS+S+S    +     +AD +
Subjt:  FLWAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-----DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV

Query:  TMGMQNNLTPEEPISSKVTILGH
         +G    ++P++ +S+ V +LGH
Subjt:  TMGMQNNLTPEEPISSKVTILGH
KAE8647343.1 hypothetical protein Csa_003811 [Cucumis sativus]3.3e-1451.11Show/hide
Query:  WAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSE
        +   I +L C   V  AD++HFGIHAVGHAVEPFCPGGYSDRGDHC H+  ++  N       D+FDDT+K     V +LS S+S   +E
Subjt:  WAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSE
KAG6572424.1 hypothetical protein SDJN03_29152, partial [Cucurbita argyrosperma subsp. sororia]4.3e-2255.45Show/hide
Query:  VGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAVTMGMQNNLTPEEP
        +  AD  HFGIHA+GHAVEPFCPGGYSDRGDHCNHI  +   N       DDFDDT+K     + +LSM+MS+  SEST  AE +AV + ++ +++PEE 
Subjt:  VGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAVTMGMQNNLTPEEP

Query:  ISSKVTILGH
        +S KVT+LGH
Subjt:  ISSKVTILGH
TrEMBL top hitse value%identityAlignment
A0A0A0KE60 Uncharacterized protein4.5e-1744.72Show/hide
Query:  WAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV
        +   I +L C   V  AD++HFGIHAVGHAVEPFCPGGYSDRGDHC H+  ++  N       D+FDDT+K     V +LS S+S   +E      AD +
Subjt:  WAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-------DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV

Query:  TMGMQNNLTPEEPISSKVTILGH
         +G+    +P + +S K  +LGH
Subjt:  TMGMQNNLTPEEPISSKVTILGH
A0A5A7V7L4 Uncharacterized protein2.6e-1744.72Show/hide
Query:  FLWAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-----DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV
        F+    ILV    + V  ADS+HFGIHAVGHAVEPFCPGGYSDRGDHC H+  ++  N     DD DD F      V +LS+S+S    +     +AD +
Subjt:  FLWAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFN-----DDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAV

Query:  TMGMQNNLTPEEPISSKVTILGH
         +G    ++P++ +S+ V +LGH
Subjt:  TMGMQNNLTPEEPISSKVTILGH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATCGAATCGGCGGGCATGGCAATTTGGAGATTCCTGTGGGCGGCGACGATTTTGGTATTGACATGCTCGGCCACCGTGGGCCGGGCGGATTCCGAGCACTTCGGGATCCA
CGCGGTGGGGCATGCGGTGGAGCCGTTCTGCCCCGGCGGGTACTCCGACAGAGGGGACCACTGCAACCACATAGACCACGTGGCCTTCTTCAACGACGACTTCGACGACA
CCTTCAAACCCGCCGCCACCGCCGTCGACAGACTGTCGATGTCGATGTCGCTGTCGCAGTCGGAGTCCACGGTGGCGGCGGAGGCCGATGCCGTCACTATGGGAATGCAG
AATAATCTCACTCCCGAAGAACCCATTTCCAGTAAAGTCACAATCTTAGGCCAT
mRNA sequenceShow/hide mRNA sequence
ATCGAATCGGCGGGCATGGCAATTTGGAGATTCCTGTGGGCGGCGACGATTTTGGTATTGACATGCTCGGCCACCGTGGGCCGGGCGGATTCCGAGCACTTCGGGATCCA
CGCGGTGGGGCATGCGGTGGAGCCGTTCTGCCCCGGCGGGTACTCCGACAGAGGGGACCACTGCAACCACATAGACCACGTGGCCTTCTTCAACGACGACTTCGACGACA
CCTTCAAACCCGCCGCCACCGCCGTCGACAGACTGTCGATGTCGATGTCGCTGTCGCAGTCGGAGTCCACGGTGGCGGCGGAGGCCGATGCCGTCACTATGGGAATGCAG
AATAATCTCACTCCCGAAGAACCCATTTCCAGTAAAGTCACAATCTTAGGCCAT
Protein sequenceShow/hide protein sequence
IESAGMAIWRFLWAATILVLTCSATVGRADSEHFGIHAVGHAVEPFCPGGYSDRGDHCNHIDHVAFFNDDFDDTFKPAATAVDRLSMSMSLSQSESTVAAEADAVTMGMQ
NNLTPEEPISSKVTILGH